Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p28880 Brassica napus
A08p21190 Brassica napus
A09p07540 Brassica napus
A10p09680 Brassica napus
Aa31LG11G1410 Aethionema arabicum
Aa31LG3G8290 Aethionema arabicum
Aa31LG6G8690 Aethionema arabicum
Actinidia13542 Actinidia chinensis
Ah.07g208800 Amaranthus hybridus
AL7G27690 Arabidopsis lyrata
AL8G26150 Arabidopsis lyrata
AL8G38980 Arabidopsis lyrata
Aqoxy7G00497 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.3X1084 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.G7HECD Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.S2H83J Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XAW92V Arachis hypogaea
AT4G25430 Arabidopsis thaliana
AT5G51850 Arabidopsis thaliana
AT5G62170 Arabidopsis thaliana
ATR0661G439 Amborella trichopoda
Atru.chr1.559 Acer truncatum
AUR62016059 Chenopodium quinoa
AUR62021267 Chenopodium quinoa
BcaB02g09632 Brassica carinata
BcaB03g12466 Brassica carinata
BcaB08g35538 Brassica carinata
BcaC04g23427 Brassica carinata
BcaC07g38188 Brassica carinata
BcaC09g50776 Brassica carinata
BcaNung01408 Brassica carinata
BcaNung01409 Brassica carinata
BolC1t02024H Brassica oleracea
BolC3t18736H Brassica oleracea
BolC8t48608H Brassica oleracea
BolC9t53753H Brassica oleracea
BolC9t57009H Brassica oleracea
BraA06t25836Z Brassica rapa
BraA08t34069Z Brassica rapa
BraA09t36408Z Brassica rapa
BraA10t43049Z Brassica rapa
C01p20970 Brassica napus
C03p64740 Brassica napus
C09p08430 Brassica napus
C09p41340 Brassica napus
CANSAT21G2021 Cannabis sativa
CARHR232840 Cardamine hirsuta
CARHR264740 Cardamine hirsuta
CARHR275960 Cardamine hirsuta
Carub.0007s1558 Capsella rubella
Carub.0008s1189 Capsella rubella
Carub.0008s2285 Capsella rubella
Ca_10812_v3 Cicer arietinum L.
Cc02_g03580 Coffea canephora
CDE04G3755 Ceratophyllum demersum
CDE07G1851 Ceratophyllum demersum
Ciclev10004387m.g Citrus clementina
CiPaw.03G100300 Carya illinoinensis
ClCG01G005340 Citrullus lanatus
ClCG05G007700 Citrullus lanatus
COL.COLO4_14229 Corchorus olitorius
Cpa.g.sc4.199 Carica papaya
CsaV3_3G016640 Cucumis sativus L.
CsaV3_5G005590 Cucumis sativus L.
DCAR_009410 Daucus carota
DCAR_014604 Daucus carota
Dinv28506 Davidia involucrata
Dinv28507 Davidia involucrata
Dinv35140 Davidia involucrata
Dinv40025 Davidia involucrata
Duzib084G1451 Durio zibethinus
Duzib205G0479 Durio zibethinus
Duzib205G1056 Durio zibethinus
ECA232G3914 Erigeron canadensis
ECA238G0747 Erigeron canadensis
EL10Ac3g05741 Beta vulgaris
Eucgr.A02847 Eucalyptus grandis
FAN01G1737 Fragaria x ananassa
FAN03G1055 Fragaria x ananassa
FAN03G1770 Fragaria x ananassa
FAN06G1616 Fragaria x ananassa
FAN06G4109 Fragaria x ananassa
FAN10G2022 Fragaria x ananassa
FvH4_7g28730 Fragaria vesca
Glyma.09G148700 Glycine max
Glyma.10G240600 Glycine max
Glyma.16G200400 Glycine max
Glyma.20G154100 Glycine max
Gohir.A09G179400 Gossypium hirsutum
Gohir.A12G262100 Gossypium hirsutum
Gohir.D09G174700 Gossypium hirsutum
Gohir.D12G262800 Gossypium hirsutum
Gorai.006G196800 Gossypium raimondii
Gorai.008G281700 Gossypium raimondii
GSVIVG01018447001 Vitis vinifera
HanXRQChr14g0461811 Helianthus annuus
HanXRQChr15g0486221 Helianthus annuus
Haze_13790 Corylus avellana
Hma1.2p1_0488F.1_g163950 Hydrangea macrophylla
HPP92_022139 Vanilla planifolia
HPP92_022144 Vanilla planifolia
Lalb_Chr02g0140881 Lupinus albus
Lalb_Chr03g0034171 Lupinus albus
Lalb_Chr19g0131131 Lupinus albus
Lalb_Chr19g0131141 Lupinus albus
Lalb_Chr21g0304901 Lupinus albus
Lj1A988T34 Lonicera japonica
Lj2g0000316 Lotus japonicus
Lj5g0012460 Lotus japonicus
Lsat_1_v5_gn_2_130181 Lactuca sativa
Lsat_1_v5_gn_9_53700 Lactuca sativa
Manes.06G141500 Manihot esculenta
Manes.14G030900 Manihot esculenta
MBI04_g06623_MAGBIO Magnolia biondii
MD00G1004300 Malus domestica
MD01G1193200 Malus domestica
Medtr1g101910 Medicago truncatula
Medtr6g089530 Medicago truncatula
MELO3C005394.2 Cucumis melo
MELO3C006859.2 Cucumis melo
Migut.F00398 Erythranthe guttata
Migut.F01159 Erythranthe guttata
MSTRG.114 Avicennia marina
MSTRG.8430 Avicennia marina
Nitab4.5_0000205g0170 Nicotiana tabacum
Nitab4.5_0000599g0030 Nicotiana tabacum
Nitab4.5_0004911g0030 Nicotiana tabacum
Nn1g01288 Nelumbo nucifera
Nn6g34319 Nelumbo nucifera
Oeu030141.1 Olea europaea
Oeu030257.1 Olea europaea
Os04g0106500 Oryza sativa ssp. japonica
Peaxi162Scf00192g00516 Petunia axillaris
Peaxi162Scf00557g00216 Petunia axillaris
PGR042G0955 Punica granatum
PGSC0003DMG400024251 Solanum tuberosum
Phvul.004G123200 Phaseolus vulgaris
Phvul.007G065400 Phaseolus vulgaris
Potri.012G132900 Populus trichocarpa
Potri.015G135200 Populus trichocarpa
Prupe.2G287400 Prunus persica
Psat1g111440 Pisum sativum
Psat6g201640 Pisum sativum
PSO478G3102 Papaver somniferum
PSO782G0143 Papaver somniferum
RcHm_v2.0_Chr1g0376241 Rosa chinensis
Rhsim03G0174800 Rhododendron simsii
Sabra12G0100000 Salix brachista
Sabra15G0147100 Salix brachista
SalBow2G1841 Salvia bowleyana
SalBow4G0450 Salvia bowleyana
Sc19g0001750 Simmondsia chinensis
Sed0025435 Sechium edule
Sed0026899 Sechium edule
SEGI_17592 Sequoiadendron giganteum
SGA_v2.0_scaffold113G31787 Striga asiatica
Solyc03g006840.4 Solanum lycopersicum
Sopen03g002830 Solanum pennellii
Sp2g25350 Schrenkiella parvula
Sp6g14100 Schrenkiella parvula
Sp7g23450 Schrenkiella parvula
TAR629G2057 Trochodendron aralioides
THA.LOC104798744 Tarenaya hassleriana
THA.LOC104811493 Tarenaya hassleriana
THA.LOC104818268 Tarenaya hassleriana
THA.LOC104824843 Tarenaya hassleriana
Thecc.03G167000 Theobroma cacao
Thhalv10003732m.g Eutrema salsugineum
Thhalv10012958m.g Eutrema salsugineum
Thhalv10025080m.g Eutrema salsugineum
TPR.G17415 Trifolium pratense
TPR.G21305 Trifolium pratense
unitig_22.g5225 Utricularia gibba
unitig_37.g11944 Utricularia gibba
unitig_60.g25538 Utricularia gibba
vmacro06738 Vaccinium macrocarpon
VMungo0100G0003 Vigna mungo
VMungo0251G2630 Vigna mungo
VMungo0464G1637 Vigna mungo
VMungo0464G2043 Vigna mungo
VMungo0720G0588 Vigna mungo
VMungo0720G0810 Vigna mungo
Zm00001eb418620 Zea mays

User provided reference genes

Program Settings