Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p28580 Brassica napus
A07p41820 Brassica napus
A09p51670 Brassica napus
Aa31LG4G6340 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.3221 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.3397 Anthoceros agrestis
Actinidia15487 Actinidia chinensis
Actinidia17035 Actinidia chinensis
Ah.00g000380 Amaranthus hybridus
Aqoxy6G01618 Aquilegia oxysepala
Aqoxy6G01751 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.CSAI9D Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.I18LAP Arachis hypogaea
AT1G76250 Arabidopsis thaliana
ATR0106G001 Amborella trichopoda
ATR0138G019 Amborella trichopoda
ATR0276G001 Amborella trichopoda
ATR0555G001 Amborella trichopoda
ATR0756G001 Amborella trichopoda
Atru.chr13.152 Acer truncatum
AUR62036887 Chenopodium quinoa
AUR62043557 Chenopodium quinoa
BcaB02g07057 Brassica carinata
BcaC08g45536 Brassica carinata
BcaC08g47123 Brassica carinata
BcaC08g47274 Brassica carinata
BolC6t38338H Brassica oleracea
BolC6t40061H Brassica oleracea
BraA07t30497Z Brassica rapa
BraA07t31712Z Brassica rapa
C06p32120 Brassica napus
C06p50220 Brassica napus
CANSAT25G3149 Cannabis sativa
CANSAT80G1902 Cannabis sativa
CARHR069810 Cardamine hirsuta
Carub.0002s2314 Capsella rubella
Ca_15440_v3 Cicer arietinum L.
CBR_g3019 Chara braunii
CBR_g9154 Chara braunii
Cc10_g00740 Coffea canephora
CDE06G1096 Ceratophyllum demersum
CDE07G0072 Ceratophyllum demersum
Cfa013034 Carpinus fangiana
Cfa014062 Carpinus fangiana
Ciclev10001182m.g Citrus clementina
CiPaw.07G139600 Carya illinoinensis
ClCG11G018640 Citrullus lanatus
COL.COLO4_03998 Corchorus olitorius
Cpa.g.sc26.208 Carica papaya
CsaV3_4G037170 Cucumis sativus L.
CSS0020809 Camellia sinensis var. sinensis
DCAR_010127 Daucus carota
DCAR_013910 Daucus carota
Dinv31931 Davidia involucrata
Duzib093G1245 Durio zibethinus
Duzib116G0421 Durio zibethinus
ECA238G1445 Erigeron canadensis
EL10Ac1g01980 Beta vulgaris
Eucgr.F01754 Eucalyptus grandis
Eucgr.F03548 Eucalyptus grandis
FAN15G2102 Fragaria x ananassa
FAN27G3424 Fragaria x ananassa
FvH4_2g37560 Fragaria vesca
Glyma.04G018600 Glycine max
Glyma.06G018900 Glycine max
Gohir.A01G106600 Gossypium hirsutum
Gohir.A05G180000 Gossypium hirsutum
Gohir.D01G093100 Gossypium hirsutum
Gohir.D05G183000 Gossypium hirsutum
Gorai.002G118500 Gossypium raimondii
Gorai.009G188300 Gossypium raimondii
GSVIVG01008681001 Vitis vinifera
HanXRQChr14g0428221 Helianthus annuus
HanXRQChr14g0428241 Helianthus annuus
HanXRQChr15g0491851 Helianthus annuus
Haze_22757 Corylus avellana
HPP92_022186 Vanilla planifolia
HPP92_022192 Vanilla planifolia
HPP92_026182 Vanilla planifolia
HPP92_026195 Vanilla planifolia
Hund01762 Selenicereus undatus
Lalb_Chr11g0061681 Lupinus albus
Lalb_Chr23g0265831 Lupinus albus
Lj1g0016047 Lotus japonicus
Lj4A804T73 Lonicera japonica
Lsat_1_v5_gn_2_6240 Lactuca sativa
Manes.05G135000 Manihot esculenta
Manes.18G006000 Manihot esculenta
Mapoly0006s0188 Marchantia polymorpha
Mapoly0049s0068 Marchantia polymorpha
MBI08_g19981_MAGBIO Magnolia biondii
MD08G1003100 Malus domestica
MD15G1002800 Malus domestica
Medtr3g115180 Medicago truncatula
MELO3C017015.2 Cucumis melo
Migut.C00949 Erythranthe guttata
Migut.C00953 Erythranthe guttata
MSTRG.1112 Avicennia marina
MSTRG.25298 Avicennia marina
Nitab4.5_0000588g0130 Nicotiana tabacum
Nitab4.5_0000699g0100 Nicotiana tabacum
Nitab4.5_0003544g0010 Nicotiana tabacum
Nn1g01454 Nelumbo nucifera
Nn5g30922 Nelumbo nucifera
Nn6g31748 Nelumbo nucifera
Oeu021826.1 Olea europaea
Oeu035836.1 Olea europaea
Os02g0119600 Oryza sativa ssp. japonica
Peaxi162Scf00064g01016 Petunia axillaris
Peaxi162Scf00064g01131 Petunia axillaris
Peaxi162Scf00104g00322 Petunia axillaris
PGR031G0670 Punica granatum
PGSC0003DMG400009974 Solanum tuberosum
PGSC0003DMG400029320 Solanum tuberosum
Phvul.009G021800 Phaseolus vulgaris
Potri.002G011400 Populus trichocarpa
Potri.005G249600 Populus trichocarpa
Potri.012G136700 Populus trichocarpa
Pp3c14_15070 Physcomitrium patens
Pp3c17_5840 Physcomitrium patens
Pp3c17_7390 Physcomitrium patens
Pp3c1_32600 Physcomitrium patens
Pp3c2_5370 Physcomitrium patens
Prupe.1G355100 Prunus persica
Prupe.6G163800 Prunus persica
Psat0s5633g0040 Pisum sativum
PSO017G1063 Papaver somniferum
PSO017G1302 Papaver somniferum
PSO017G1698 Papaver somniferum
PSO017G3905 Papaver somniferum
PSO017G3919 Papaver somniferum
PSO017G4841 Papaver somniferum
PSO104G0104 Papaver somniferum
PSO170G1328 Papaver somniferum
PSO170G2421 Papaver somniferum
PSO170G3515 Papaver somniferum
PSO170G4333 Papaver somniferum
PSO170G5992 Papaver somniferum
PSO170G6284 Papaver somniferum
PSO210G7283 Papaver somniferum
QL02p013934 Quercus lobata
RcHm_v2.0_Chr6g0304171 Rosa chinensis
Rhsim06G0008200 Rhododendron simsii
Sabra02G0008700 Salix brachista
Sabra02G0008800 Salix brachista
Sabra02G0009000 Salix brachista
Sabra05G0193100 Salix brachista
SalBow7G4127 Salvia bowleyana
Sc02g0009060 Simmondsia chinensis
Sed0020753 Sechium edule
SEGI_06086 Sequoiadendron giganteum
SEGI_23487 Sequoiadendron giganteum
SGA_v2.0_scaffold108G30849 Striga asiatica
SGA_v2.0_scaffold108G30854 Striga asiatica
SGA_v2.0_scaffold275G46585 Striga asiatica
SGA_v2.0_scaffold275G46588 Striga asiatica
SHI08003 Sapria himalayana
SMO141G0079 Selaginella moellendorffii
SMO147G0236 Selaginella moellendorffii
SMO170G0013 Selaginella moellendorffii
SMO364G0266 Selaginella moellendorffii
SMO367G1018 Selaginella moellendorffii
Solyc04g082280.3 Solanum lycopersicum
Solyc12g094550.2 Solanum lycopersicum
Sopen04g035900 Solanum pennellii
Sopen12g031450 Solanum pennellii
Sp5g31390 Schrenkiella parvula
TAR628G1614 Trochodendron aralioides
THA.LOC104813245 Tarenaya hassleriana
Thecc.08G057700 Theobroma cacao
Thhalv10018564m.g Eutrema salsugineum
TPR.G38113 Trifolium pratense
TWI12G0241 Tripterygium wilfordii
TWI56G0154 Tripterygium wilfordii
unitig_0.g1266 Utricularia gibba
unitig_52.g17754 Utricularia gibba
unitig_699.g19216 Utricularia gibba
unitig_699.g19217 Utricularia gibba
unitig_747.g21519 Utricularia gibba
unitig_747.g21882 Utricularia gibba
vmacro21825 Vaccinium macrocarpon
VMungo1309G0568 Vigna mungo
Zm00001eb209300 Zea mays

User provided reference genes

Program Settings