Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p35180 Brassica napus
A05p40900 Brassica napus
Aa31LG5G17870 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.807 Anthoceros agrestis
Actinidia06249 Actinidia chinensis
Actinidia06251 Actinidia chinensis
Actinidia06253 Actinidia chinensis
Actinidia19460 Actinidia chinensis
Actinidia39916 Actinidia chinensis
Ah.11g039100 Amaranthus hybridus
AL3G18600 Arabidopsis lyrata
Aqoxy2G00338 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.88C8QI Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.R8F3HD Arachis hypogaea
AT3G07300 Arabidopsis thaliana
ATR0075G007 Amborella trichopoda
Atru.chr12.1379 Acer truncatum
Atru.chr4.1982 Acer truncatum
AUR62033839 Chenopodium quinoa
AUR62035743 Chenopodium quinoa
AUR62042161 Chenopodium quinoa
AUR62043363 Chenopodium quinoa
BcaB04g21296 Brassica carinata
BNapus_Darmor_BZH_scaffold_109p00130 Brassica napus
BolC1t05559H Brassica oleracea
BolC5t34655H Brassica oleracea
BraA01t04387Z Brassica rapa
BraA05t22819Z Brassica rapa
C03p42780 Brassica napus
C05p60000 Brassica napus
CAN.G220.44 Capsicum annuum
CAN.G476.4 Capsicum annuum
CARHR081950 Cardamine hirsuta
Carub.0003s0684 Capsella rubella
Ca_02468_v3 Cicer arietinum L.
CBR_g42076 Chara braunii
Cc02_g29710 Coffea canephora
Cc03_g05880 Coffea canephora
Cc03_g05890 Coffea canephora
CDE07G1968 Ceratophyllum demersum
Cfa006289 Carpinus fangiana
Cfa010888 Carpinus fangiana
Cfa022448 Carpinus fangiana
Ciclev10001295m.g Citrus clementina
Ciclev10005415m.g Citrus clementina
Ciclev10006759m.g Citrus clementina
CiPaw.13G012300 Carya illinoinensis
CiPaw.14G006600 Carya illinoinensis
ClCG01G007720 Citrullus lanatus
COL.COLO4_15929 Corchorus olitorius
COL.COLO4_21460 Corchorus olitorius
Cpa.g.sc223.12 Carica papaya
Cre16.g662902 Chlamydomonas reinhardtii
CsaV3_5G024790 Cucumis sativus L.
CSS0016471 Camellia sinensis var. sinensis
CSS0026575 Camellia sinensis var. sinensis
CSS0033000 Camellia sinensis var. sinensis
DCAR_022349 Daucus carota
Dinv09260 Davidia involucrata
Dinv32036 Davidia involucrata
Duzib114G0596 Durio zibethinus
Duzib128G1330 Durio zibethinus
ECA233G5140 Erigeron canadensis
EL10Ac1g02286 Beta vulgaris
Eucgr.G03244 Eucalyptus grandis
FAN01G2043 Fragaria x ananassa
FAN03G0077 Fragaria x ananassa
FAN03G0469 Fragaria x ananassa
FAN06G0531 Fragaria x ananassa
FAN10G4281 Fragaria x ananassa
FAN12G0242 Fragaria x ananassa
FAN17G2831 Fragaria x ananassa
FAN22G1391 Fragaria x ananassa
FvH4_4g04150 Fragaria vesca
FvH4_7g02780 Fragaria vesca
Glyma.07G090900 Glycine max
Glyma.09G185000 Glycine max
Glyma.11G154300 Glycine max
Gohir.A05G281000 Gossypium hirsutum
Gohir.D05G283000 Gossypium hirsutum
Gorai.009G296500 Gossypium raimondii
GSVIVG01000658001 Vitis vinifera
GSVIVG01024428001 Vitis vinifera
HanXRQChr12g0382881 Helianthus annuus
Haze_03069 Corylus avellana
Hma1.2p1_0121F.1_g057510 Hydrangea macrophylla
Hma1.2p1_1396F.1_g280580 Hydrangea macrophylla
HPP92_016595 Vanilla planifolia
Hund21541 Selenicereus undatus
Lalb_Chr08g0234711 Lupinus albus
Lj3g0013265 Lotus japonicus
Lj9A655T38 Lonicera japonica
Lj9C655T7 Lonicera japonica
Lsat_1_v5_gn_5_36241 Lactuca sativa
Lsat_1_v5_gn_8_34020 Lactuca sativa
Manes.04G165800 Manihot esculenta
Mapoly0105s0017 Marchantia polymorpha
MBI13_g01615_MAGBIO Magnolia biondii
MCO16G454 Micromonas commoda
MD02G1290200 Malus domestica
MD07G1036800 Malus domestica
MD13G1218100 Malus domestica
MD13G1218200 Malus domestica
MD16G1223400 Malus domestica
Medtr5g031790 Medicago truncatula
MELO3C005125.2 Cucumis melo
Migut.B01218 Erythranthe guttata
MSTRG.16994 Avicennia marina
MSTRG.20523 Avicennia marina
Nitab4.5_0000320g0110 Nicotiana tabacum
Nitab4.5_0001425g0120 Nicotiana tabacum
Nitab4.5_0001681g0070 Nicotiana tabacum
Nitab4.5_0006936g0020 Nicotiana tabacum
Nn2g14898 Nelumbo nucifera
Oeu014754.1 Olea europaea
Oeu015685.1 Olea europaea
Oeu035508.1 Olea europaea
Os10g0392700 Oryza sativa ssp. japonica
Peaxi162Scf00602g00420 Petunia axillaris
Peaxi162Scf01732g00023 Petunia axillaris
PGR031G0954 Punica granatum
PGSC0003DMG400017207 Solanum tuberosum
Phvul.004G157800 Phaseolus vulgaris
Phvul.005G029500 Phaseolus vulgaris
Potri.001G026100 Populus trichocarpa
Potri.003G199301 Populus trichocarpa
Potri.010G068600 Populus trichocarpa
Potri.T126106 Populus trichocarpa
Pp3c10_19890 Physcomitrium patens
Pp3c21_14090 Physcomitrium patens
PRCOL_00001306 Prasinoderma coloniale
Prupe.1G044800 Prunus persica
Prupe.2G032300 Prunus persica
Psat3g180400 Pisum sativum
Psat6g019840 Pisum sativum
Psat6g019960 Pisum sativum
PSO339G5967 Papaver somniferum
PSO384G0478 Papaver somniferum
QL04p014432 Quercus lobata
QL04p014453 Quercus lobata
QL04p014818 Quercus lobata
QL06p019987 Quercus lobata
RcHm_v2.0_Chr1g0313641 Rosa chinensis
RcHm_v2.0_Chr1g0322021 Rosa chinensis
RcHm_v2.0_Chr1g0322871 Rosa chinensis
RcHm_v2.0_Chr1g0322881 Rosa chinensis
RcHm_v2.0_Chr1g0378031 Rosa chinensis
RcHm_v2.0_Chr2g0146721 Rosa chinensis
RcHm_v2.0_Chr4g0394571 Rosa chinensis
Rhsim02G0042300 Rhododendron simsii
Rhsim07G0066200 Rhododendron simsii
Sabra01G0019300 Salix brachista
Sabra03G0148000 Salix brachista
Sabra10G0038400 Salix brachista
Sabra12G0005200 Salix brachista
SalBow5G2833 Salvia bowleyana
Sc10g0004370 Simmondsia chinensis
Sed0003663 Sechium edule
Sed0017009 Sechium edule
SEGI_21043 Sequoiadendron giganteum
SEGI_24692 Sequoiadendron giganteum
SGA_v2.0_scaffold124G33635 Striga asiatica
SMO340G0195 Selaginella moellendorffii
Solyc09g090400.4 Solanum lycopersicum
Solyc11g005600.2 Solanum lycopersicum
Sopen09g033310 Solanum pennellii
Sopen11g001570 Solanum pennellii
Sp3g06250 Schrenkiella parvula
TAR633G0271 Trochodendron aralioides
TAR633G2507 Trochodendron aralioides
TAR636G0376 Trochodendron aralioides
TAR701G0001 Trochodendron aralioides
THA.LOC104818980 Tarenaya hassleriana
Thecc.10G166200 Theobroma cacao
Thhalv10007798m.g Eutrema salsugineum
TPR.G36778 Trifolium pratense
TWI63G0088 Tripterygium wilfordii
unitig_578.g16298 Utricularia gibba
vmacro15463 Vaccinium macrocarpon
vmacro22865 Vaccinium macrocarpon
VMungo0464G1704 Vigna mungo
Zm00001eb048720 Zea mays
Zm00001eb223560 Zea mays

User provided reference genes

Program Settings