Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p30670 Brassica napus
A01p30690 Brassica napus
A08p33440 Brassica napus
Aa31LG2G9060 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.3672 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.2118 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.2344 Anthoceros agrestis
Actinidia26947 Actinidia chinensis
Ah.09g235250 Amaranthus hybridus
AL1G22670 Arabidopsis lyrata
AL2G14320 Arabidopsis lyrata
Aqoxy4G01977 Aquilegia oxysepala
AT1G11560 Arabidopsis thaliana
AT1G61790 Arabidopsis thaliana
ATR0109G031 Amborella trichopoda
Atru.chr10.2153 Acer truncatum
Atru.chr10.2154 Acer truncatum
AUR62012654 Chenopodium quinoa
AUR62021999 Chenopodium quinoa
BcaB03g13253 Brassica carinata
BcaB04g20374 Brassica carinata
BcaB07g31286 Brassica carinata
BcaC02g10535 Brassica carinata
BcaC04g22351 Brassica carinata
BcaC06g31863 Brassica carinata
BcaC07g38668 Brassica carinata
BolC1t03856H Brassica oleracea
BolC4t24319H Brassica oleracea
BolC8t49101H Brassica oleracea
BolC9t54930H Brassica oleracea
BraA01t03198Z Brassica rapa
BraA01t03199Z Brassica rapa
BraA08t35260Z Brassica rapa
C01p39060 Brassica napus
C04p27760 Brassica napus
C08p14530 Brassica napus
C09p20250 Brassica napus
CAN.G404.10 Capsicum annuum
CAN.G569.37 Capsicum annuum
CAN.G782.10 Capsicum annuum
CAN.G782.11 Capsicum annuum
CAN.G782.12 Capsicum annuum
CAN.G782.22 Capsicum annuum
CANSAT56G3751 Cannabis sativa
CARHR011840 Cardamine hirsuta
CARHR050550 Cardamine hirsuta
Carub.0001s1117 Capsella rubella
Carub.0002s0327 Capsella rubella
Ca_10975_v3 Cicer arietinum L.
CBR_g36660 Chara braunii
CBR_g46234 Chara braunii
Cc02_g11630 Coffea canephora
CDE05G0706 Ceratophyllum demersum
CDE11G0393 Ceratophyllum demersum
Cfa000266 Carpinus fangiana
Ciclev10015811m.g Citrus clementina
CiPaw.09G088000 Carya illinoinensis
ClCG01G022150 Citrullus lanatus
COL.COLO4_31737 Corchorus olitorius
COL.COLO4_35765 Corchorus olitorius
Cpa.g.sc198.13 Carica papaya
Cre16.g675602 Chlamydomonas reinhardtii
CsaV3_6G049210 Cucumis sativus L.
CSS0014334 Camellia sinensis var. sinensis
CSS0017235 Camellia sinensis var. sinensis
DCAR_028162 Daucus carota
Dinv17826 Davidia involucrata
Dinv20022 Davidia involucrata
Duzib160G0429 Durio zibethinus
Duzib192G0935 Durio zibethinus
ECA234G3589 Erigeron canadensis
EL10Ac8g19999 Beta vulgaris
EL10As1g23076 Beta vulgaris
Eucgr.E04113 Eucalyptus grandis
FAN21G0915 Fragaria x ananassa
FAN25G0829 Fragaria x ananassa
FvH4_3g02600 Fragaria vesca
Glyma.10G251600 Glycine max
Glyma.20G141900 Glycine max
Gohir.A05G168300 Gossypium hirsutum
Gohir.A06G145950 Gossypium hirsutum
Gohir.A09G069600 Gossypium hirsutum
Gohir.D05G171400 Gossypium hirsutum
Gohir.D06G152000 Gossypium hirsutum
Gohir.D09G069500 Gossypium hirsutum
Gorai.006G083700 Gossypium raimondii
Gorai.010G177400 Gossypium raimondii
HanXRQChr01g0003661 Helianthus annuus
Haze_06749 Corylus avellana
Hma1.2p1_0091F.1_g046190 Hydrangea macrophylla
Lalb_Chr06g0164871 Lupinus albus
Lalb_Chr21g0307811 Lupinus albus
Lj1A1226T40 Lonicera japonica
Lj2A272T65 Lonicera japonica
Lj5g0019176 Lotus japonicus
Lsat_1_v5_gn_1_121441 Lactuca sativa
Lsat_1_v5_gn_3_29240 Lactuca sativa
Lsat_1_v5_gn_4_58721 Lactuca sativa
Lsat_1_v5_gn_4_80500 Lactuca sativa
Lsat_1_v5_gn_7_27941 Lactuca sativa
Lsat_1_v5_gn_7_47961 Lactuca sativa
Lsat_1_v5_gn_7_47981 Lactuca sativa
Manes.16G011500 Manihot esculenta
Manes.17G035900 Manihot esculenta
Mapoly0061s0113 Marchantia polymorpha
MBI06_g27714_MAGBIO Magnolia biondii
MBI14_g15203_MAGBIO Magnolia biondii
MBI18_g01410_MAGBIO Magnolia biondii
MBI19_g26612_MAGBIO Magnolia biondii
MD00G1180300 Malus domestica
MD02G1269200 Malus domestica
MD02G1269300 Malus domestica
MD10G1315200 Malus domestica
Medtr1g105470 Medicago truncatula
MELO3C007374.2 Cucumis melo
Migut.H01555 Erythranthe guttata
MSTRG.14647 Avicennia marina
Nitab4.5_0000091g0500 Nicotiana tabacum
Nitab4.5_0002196g0020 Nicotiana tabacum
Nitab4.5_0002347g0110 Nicotiana tabacum
Nitab4.5_0002645g0040 Nicotiana tabacum
Nitab4.5_0005793g0040 Nicotiana tabacum
Nitab4.5_0010745g0030 Nicotiana tabacum
Nn1g03617 Nelumbo nucifera
Nn1g07049 Nelumbo nucifera
Oeu016525.1 Olea europaea
Os03g0565100 Oryza sativa ssp. japonica
Peaxi162Scf00079g00073 Petunia axillaris
Peaxi162Scf00241g00121 Petunia axillaris
Peaxi162Scf00427g00012 Petunia axillaris
PGR004G2273 Punica granatum
PGSC0003DMG400002072 Solanum tuberosum
PGSC0003DMG400010547 Solanum tuberosum
PGSC0003DMG400024071 Solanum tuberosum
Phvul.007G053000 Phaseolus vulgaris
Potri.011G025700 Populus trichocarpa
Pp3c10_1910 Physcomitrium patens
Pp3c26_7270 Physcomitrium patens
Pp3c3_13650 Physcomitrium patens
Prupe.4G025400 Prunus persica
Psat6g210560 Pisum sativum
PSO541G6483 Papaver somniferum
PSO675G2634 Papaver somniferum
QL03p066087 Quercus lobata
QL05p074736 Quercus lobata
QL08p007617 Quercus lobata
QL10p045362 Quercus lobata
Rhsim13G0157400 Rhododendron simsii
Sabra04G0011400 Salix brachista
Sabra11G0016200 Salix brachista
Sabra11G0021900 Salix brachista
SalBow8G5594 Salvia bowleyana
Sc05g0008910 Simmondsia chinensis
Sed0012988 Sechium edule
Sed0022949 Sechium edule
SEGI_11297 Sequoiadendron giganteum
SGA_v2.0_scaffold114G32031 Striga asiatica
SGA_v2.0_scaffold89G27449 Striga asiatica
SMO118G0372 Selaginella moellendorffii
SMO351G0034 Selaginella moellendorffii
Solyc02g080180.1 Solanum lycopersicum
Solyc03g031790.1 Solanum lycopersicum
Solyc10g008090.1 Solanum lycopersicum
Sopen02g024900 Solanum pennellii
Sopen03g005650 Solanum pennellii
Sopen10g003960 Solanum pennellii
Sp1g10170 Schrenkiella parvula
Sp2g02750 Schrenkiella parvula
TAR624G0284 Trochodendron aralioides
TAR626G0320 Trochodendron aralioides
THA.LOC104809515 Tarenaya hassleriana
THA.LOC104823520 Tarenaya hassleriana
Thecc.06G215100 Theobroma cacao
Thhalv10008090m.g Eutrema salsugineum
Thhalv10023566m.g Eutrema salsugineum
TPR.G16992 Trifolium pratense
TPR.G5472 Trifolium pratense
TWI38G0036 Tripterygium wilfordii
TWI38G1222 Tripterygium wilfordii
TWI38G1592 Tripterygium wilfordii
unitig_26.g9395 Utricularia gibba
VMungo0720G2911 Vigna mungo
Zm00001eb043070 Zea mays

User provided reference genes

Program Settings