Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p32410 Brassica napus
A05p03190 Brassica napus
Aa31LG1G24600 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.4867 Anthoceros agrestis
Actinidia11198 Actinidia chinensis
Actinidia32520 Actinidia chinensis
Ah.01g001950 Amaranthus hybridus
Ah.01g013400 Amaranthus hybridus
AL4G41450 Arabidopsis lyrata
Aqoxy4G00176 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.N94NTJ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.UWZ29M Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Y7JGW6 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ZP8MLZ Arachis hypogaea
AT2G42840 Arabidopsis thaliana
ATR0737G120 Amborella trichopoda
Atru.chr6.1510 Acer truncatum
AUR62015148 Chenopodium quinoa
AUR62017604 Chenopodium quinoa
BcaB06g29267 Brassica carinata
BcaC02g07218 Brassica carinata
BcaNung06740 Brassica carinata
BolC4t22020H Brassica oleracea
BolC4t28493H Brassica oleracea
BraA04t18694Z Brassica rapa
BraA05t19309Z Brassica rapa
C04p03840 Brassica napus
C04p69930 Brassica napus
CAN.G1191.4 Capsicum annuum
CAN.G164.22 Capsicum annuum
CAN.G585.54 Capsicum annuum
CANSAT64G2056 Cannabis sativa
CARHR137920 Cardamine hirsuta
Carub.0004s2528 Capsella rubella
Ca_06287_v3 Cicer arietinum L.
Ca_27365_v3 Cicer arietinum L.
Cc05_g09310 Coffea canephora
CDE02G0164 Ceratophyllum demersum
CDE02G2915 Ceratophyllum demersum
CDE09G1130 Ceratophyllum demersum
Cfa022914 Carpinus fangiana
Ciclev10032169m.g Citrus clementina
CiPaw.03G189300 Carya illinoinensis
ClCG02G018380 Citrullus lanatus
ClCG09G022350 Citrullus lanatus
COL.COLO4_33737 Corchorus olitorius
Cpa.g.sc50.77 Carica papaya
CsaV3_6G015810 Cucumis sativus L.
CsaV3_6G038000 Cucumis sativus L.
CSS0030446 Camellia sinensis var. sinensis
DCAR_009794 Daucus carota
DCAR_016898 Daucus carota
DCAR_021309 Daucus carota
Dinv12695 Davidia involucrata
Duzib147G0801 Durio zibethinus
Duzib187G0136 Durio zibethinus
Duzib264G0293 Durio zibethinus
ECA246G0286 Erigeron canadensis
EL10Ac9g22858 Beta vulgaris
Eucgr.A01963 Eucalyptus grandis
Eucgr.K01198 Eucalyptus grandis
FAN02G2641 Fragaria x ananassa
FAN05G3098 Fragaria x ananassa
FAN14G5523 Fragaria x ananassa
FvH4_6g38100 Fragaria vesca
Glyma.02G280550 Glycine max
Glyma.02G287400 Glycine max
Glyma.08G309700 Glycine max
Glyma.14G027551 Glycine max
Glyma.18G106400 Glycine max
Gohir.A05G378400 Gossypium hirsutum
Gohir.D04G037100 Gossypium hirsutum
Gorai.012G041900 Gossypium raimondii
HanXRQChr01g0028591 Helianthus annuus
HanXRQChr06g0171371 Helianthus annuus
HanXRQChr17g0565191 Helianthus annuus
HanXRQChr17g0565411 Helianthus annuus
HanXRQChr17g0565441 Helianthus annuus
HanXRQChr17g0565471 Helianthus annuus
HanXRQChr17g0565481 Helianthus annuus
Haze_13489 Corylus avellana
Hma1.2p1_0073F.1_g038610 Hydrangea macrophylla
HPP92_009096 Vanilla planifolia
Hund08216 Selenicereus undatus
Lalb_Chr04g0248731 Lupinus albus
Lalb_Chr10g0106741 Lupinus albus
Lalb_Chr17g0348311 Lupinus albus
Lalb_Chr19g0137861 Lupinus albus
Lalb_Chr20g0108881 Lupinus albus
Lj6g0002200 Lotus japonicus
LjContig00310g0001182 Lotus japonicus
Lsat_1_v5_gn_3_35901 Lactuca sativa
Lsat_1_v5_gn_4_26620 Lactuca sativa
Manes.01G128300 Manihot esculenta
MBI06_g20684_MAGBIO Magnolia biondii
MBI07_g30204_MAGBIO Magnolia biondii
MD09G1154000 Malus domestica
MD17G1140600 Malus domestica
Medtr3g089570 Medicago truncatula
MELO3C014462.2 Cucumis melo
MELO3C019689.2 Cucumis melo
Migut.H02092 Erythranthe guttata
Migut.M00516 Erythranthe guttata
MSTRG.15053 Avicennia marina
MSTRG.6755 Avicennia marina
Nitab4.5_0000446g0080 Nicotiana tabacum
Nitab4.5_0001402g0030 Nicotiana tabacum
Nitab4.5_0001675g0060 Nicotiana tabacum
Nitab4.5_0002027g0180 Nicotiana tabacum
Nitab4.5_0006934g0020 Nicotiana tabacum
Nitab4.5_0013539g0020 Nicotiana tabacum
Nn3g20965 Nelumbo nucifera
Nn6g34390 Nelumbo nucifera
Oeu020066.1 Olea europaea
Oeu040027.1 Olea europaea
Os01g0726700 Oryza sativa ssp. japonica
Os02g0230300 Oryza sativa ssp. japonica
Os06g0553200 Oryza sativa ssp. japonica
Os10g0132400 Oryza sativa ssp. japonica
Peaxi162Scf00035g00302 Petunia axillaris
Peaxi162Scf00688g00432 Petunia axillaris
Peaxi162Scf00807g00024 Petunia axillaris
PGR142G2515 Punica granatum
PGSC0003DMG400007796 Solanum tuberosum
PGSC0003DMG400017342 Solanum tuberosum
PGSC0003DMG400021281 Solanum tuberosum
Phvul.006G033900 Phaseolus vulgaris
Phvul.008G190900 Phaseolus vulgaris
Potri.002G060800 Populus trichocarpa
Potri.005G200900 Populus trichocarpa
Pp3c11_23110 Physcomitrium patens
Pp3c4_16960 Physcomitrium patens
Pp3c7_3869 Physcomitrium patens
Prupe.3G171000 Prunus persica
Psat0s4925g0080 Pisum sativum
Psat2g014640 Pisum sativum
PSO541G0678 Papaver somniferum
PSO675G0845 Papaver somniferum
QL08p043924 Quercus lobata
RcHm_v2.0_Chr2g0151161 Rosa chinensis
Rhsim06G0118300 Rhododendron simsii
Rhsim06G0118400 Rhododendron simsii
Sabra02G0049300 Salix brachista
Sabra05G0152900 Salix brachista
SalBow7G0202 Salvia bowleyana
SalBow7G1469 Salvia bowleyana
Sc15g0002430 Simmondsia chinensis
Sed0013297 Sechium edule
Sed0014259 Sechium edule
Sed0024619 Sechium edule
SEGI_25228 Sequoiadendron giganteum
SGA_v2.0_scaffold70G23672 Striga asiatica
Solyc07g055950.3 Solanum lycopersicum
Solyc10g007800.3 Solanum lycopersicum
Solyc12g011010.2 Solanum lycopersicum
Sopen07g029310 Solanum pennellii
Sopen10g003700 Solanum pennellii
Sopen12g006370 Solanum pennellii
Sp4g24960 Schrenkiella parvula
TAR626G1101 Trochodendron aralioides
THA.LOC104803179 Tarenaya hassleriana
Thecc.01G160900 Theobroma cacao
Thhalv10016927m.g Eutrema salsugineum
TPR.G12519 Trifolium pratense
TPR.G16759 Trifolium pratense
TPR.G23241 Trifolium pratense
TPR.G40574 Trifolium pratense
TWI14G1010 Tripterygium wilfordii
TWI59G1023 Tripterygium wilfordii
unitig_37.g12854 Utricularia gibba
unitig_46.g18277 Utricularia gibba
unitig_62.g23108 Utricularia gibba
unitig_747.g21612 Utricularia gibba
unitig_85.g27387 Utricularia gibba
unitig_899.g15337 Utricularia gibba
vmacro12451 Vaccinium macrocarpon
VMungo0540G2251 Vigna mungo
VMungo0647G1422 Vigna mungo
Zm00001eb120700 Zea mays
Zm00001eb154370 Zea mays
Zm00001eb239390 Zea mays
Zm00001eb277660 Zea mays
Zm00001eb278420 Zea mays
Zm00001eb384740 Zea mays

User provided reference genes

Program Settings