Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p14100 Brassica napus
A07p32660 Brassica napus
A07p33850 Brassica napus
Aa31LG2G3620 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.3948 Anthoceros agrestis
Actinidia18121 Actinidia chinensis
Actinidia26289 Actinidia chinensis
Ah.02g115680 Amaranthus hybridus
AL2G25760 Arabidopsis lyrata
Aqoxy3G03894 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.G4J1DJ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.M5A7E6 Arachis hypogaea
AT1G62920 Arabidopsis thaliana
AT1G67250 Arabidopsis thaliana
AT5G38650 Arabidopsis thaliana
ATR0053G008 Amborella trichopoda
ATR0693G122 Amborella trichopoda
Atru.chr2.1608 Acer truncatum
Atru.chr2.1922 Acer truncatum
Atru.chr8.949 Acer truncatum
AUR62040335 Chenopodium quinoa
AUR62042069 Chenopodium quinoa
AUR62044332 Chenopodium quinoa
BcaB03g15214 Brassica carinata
BcaB03g15341 Brassica carinata
BcaB05g24251 Brassica carinata
BcaC02g12028 Brassica carinata
BcaC03g14820 Brassica carinata
BcaC08g46151 Brassica carinata
BolC1t05893H Brassica oleracea
BolC2t08424H Brassica oleracea
BolC6t38976H Brassica oleracea
BolC6t39133H Brassica oleracea
BraA02t06473Z Brassica rapa
BraA07t30890Z Brassica rapa
BraA07t31011Z Brassica rapa
C02p22710 Brassica napus
C04p08860 Brassica napus
C06p38830 Brassica napus
C06p43020 Brassica napus
CAN.G497.5 Capsicum annuum
CAN.G512.5 Capsicum annuum
CANSAT64G0170 Cannabis sativa
CARHR059720 Cardamine hirsuta
CARHR214090 Cardamine hirsuta
Carub.0002s1352 Capsella rubella
Carub.0007s3721 Capsella rubella
Ca_04934_v3 Cicer arietinum L.
Ca_24455_v3 Cicer arietinum L.
CBR_g34012 Chara braunii
Cc07_g05070 Coffea canephora
CDE01G0232 Ceratophyllum demersum
CDE02G3838 Ceratophyllum demersum
Cfa007953 Carpinus fangiana
Ciclev10013059m.g Citrus clementina
CiPaw.03G059000 Carya illinoinensis
CiPaw.04G040000 Carya illinoinensis
ClCG11G005320 Citrullus lanatus
COL.COLO4_16198 Corchorus olitorius
Cpa.g.sc179.30 Carica papaya
Cre16.g665000 Chlamydomonas reinhardtii
CsaV3_5G039100 Cucumis sativus L.
CSS0014522 Camellia sinensis var. sinensis
CSS0022784 Camellia sinensis var. sinensis
CSS0049372 Camellia sinensis var. sinensis
DCAR_007518 Daucus carota
Dinv33926 Davidia involucrata
Dinv34854 Davidia involucrata
Duzib138G1497 Durio zibethinus
Duzib268G0352 Durio zibethinus
ECA238G2303 Erigeron canadensis
EL10Ac5g11727 Beta vulgaris
FAN02G1560 Fragaria x ananassa
FAN05G0572 Fragaria x ananassa
FAN07G2394 Fragaria x ananassa
FAN14G1502 Fragaria x ananassa
FvH4_6g45420 Fragaria vesca
Glyma.11G093000 Glycine max
Glyma.12G019300 Glycine max
Gohir.A08G044800 Gossypium hirsutum
Gohir.D08G054500 Gossypium hirsutum
Gohir.D08G113616 Gossypium hirsutum
Gohir.D08G115050 Gossypium hirsutum
Gorai.001G209900 Gossypium raimondii
Gorai.003G095200 Gossypium raimondii
Gorai.004G054900 Gossypium raimondii
Gorai.009G403900 Gossypium raimondii
GSVIVG01036450001 Vitis vinifera
HanXRQChr12g0385611 Helianthus annuus
HanXRQChr14g0448851 Helianthus annuus
Haze_14116 Corylus avellana
Haze_14122 Corylus avellana
Hma1.2p1_0550F.1_g177200 Hydrangea macrophylla
Hma1.2p1_0550F.1_g177205 Hydrangea macrophylla
HPP92_000270 Vanilla planifolia
Hund15121 Selenicereus undatus
Lalb_Chr09g0320331 Lupinus albus
Lalb_Chr16g0376641 Lupinus albus
Lalb_Chr19g0139861 Lupinus albus
Lj3g0004703 Lotus japonicus
LjContig00222g0005460 Lotus japonicus
Lsat_1_v5_gn_2_90800 Lactuca sativa
Manes.01G107800 Manihot esculenta
Manes.02G066100 Manihot esculenta
Mapoly0073s0035 Marchantia polymorpha
MBI10_g08551_MAGBIO Magnolia biondii
MBI16_g33829_MAGBIO Magnolia biondii
MBI16_g46925_MAGBIO Magnolia biondii
MCO04G514 Micromonas commoda
MD01G1088800 Malus domestica
MD05G1212600 Malus domestica
MD09G1083200 Malus domestica
MD17G1073500 Malus domestica
Medtr4g077240 Medicago truncatula
Medtr5g008020 Medicago truncatula
MELO3C022086.2 Cucumis melo
Migut.H00529 Erythranthe guttata
Migut.K00859 Erythranthe guttata
MSTRG.15417 Avicennia marina
MSTRG.3390 Avicennia marina
Nitab4.5_0002108g0070 Nicotiana tabacum
Nitab4.5_0003461g0020 Nicotiana tabacum
Nitab4.5_0004487g0040 Nicotiana tabacum
Nitab4.5_0009272g0030 Nicotiana tabacum
Nn3g17694 Nelumbo nucifera
Nn4g23700 Nelumbo nucifera
Oeu027946.1 Olea europaea
Oeu049326.1 Olea europaea
Oeu049327.1 Olea europaea
Os02g0800100 Oryza sativa ssp. japonica
Os02g0800500 Oryza sativa ssp. japonica
Os02g0801200 Oryza sativa ssp. japonica
Os02g0801300 Oryza sativa ssp. japonica
Os03g0583700 Oryza sativa ssp. japonica
Os09g0314900 Oryza sativa ssp. japonica
Peaxi162Scf00479g00114 Petunia axillaris
Peaxi162Scf01056g00243 Petunia axillaris
PGR042G1179 Punica granatum
PGSC0003DMG400010046 Solanum tuberosum
Phvul.011G021700 Phaseolus vulgaris
Potri.006G249600 Populus trichocarpa
Potri.017G111900 Populus trichocarpa
Pp3c20_8310 Physcomitrium patens
Pp3c23_15440 Physcomitrium patens
PRCOL_00003426 Prasinoderma coloniale
Prupe.3G240300 Prunus persica
Prupe.5G161800 Prunus persica
Psat7g171120 Pisum sativum
PSO063G3423 Papaver somniferum
PSO782G4209 Papaver somniferum
QL02p052938 Quercus lobata
RcHm_v2.0_Chr2g0163251 Rosa chinensis
RcHm_v2.0_Chr5g0011871 Rosa chinensis
Rhsim10G0064100 Rhododendron simsii
SalBow1G0221 Salvia bowleyana
SalBow1G5732 Salvia bowleyana
SalBow6G0369 Salvia bowleyana
Sc10g0001340 Simmondsia chinensis
Sed0006006 Sechium edule
SEGI_14095 Sequoiadendron giganteum
SEGI_36613 Sequoiadendron giganteum
SGA_v2.0_scaffold62G21545 Striga asiatica
SMO119G0338 Selaginella moellendorffii
Solyc02g089820.4 Solanum lycopersicum
Sopen02g034510 Solanum pennellii
Sp5g22180 Schrenkiella parvula
Sp7g03260 Schrenkiella parvula
TAR374G0647 Trochodendron aralioides
TAR629G3198 Trochodendron aralioides
THA.LOC104805552 Tarenaya hassleriana
THA.LOC104823870 Tarenaya hassleriana
Thecc.04G138900 Theobroma cacao
Thhalv10019303m.g Eutrema salsugineum
Thhalv10027984m.g Eutrema salsugineum
TPR.G29477 Trifolium pratense
TWI38G0650 Tripterygium wilfordii
TWI38G0800 Tripterygium wilfordii
TWI39G0894 Tripterygium wilfordii
unitig_32.g10762 Utricularia gibba
unitig_748.g8406 Utricularia gibba
vmacro05576 Vaccinium macrocarpon
VMungo1127G1849 Vigna mungo
Zm00001eb258090 Zea mays
Zm00001eb353660 Zea mays

User provided reference genes

Program Settings