Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p17590 Brassica napus
A07p38120 Brassica napus
Aa31LG4G8670 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.5131 Anthoceros agrestis
Actinidia02577 Actinidia chinensis
Ah.05g178170 Amaranthus hybridus
AL2G31560 Arabidopsis lyrata
Aqoxy5G02591 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.14DQKS Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.2U5UH6 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.V86M3D Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.W37VG6 Arachis hypogaea
AT1G71950 Arabidopsis thaliana
ATR0584G219 Amborella trichopoda
ATR0620G025 Amborella trichopoda
Atru.chr13.1761_Atru.chr13.1772 Acer truncatum
AUR62004641 Chenopodium quinoa
AUR62022695 Chenopodium quinoa
BcaB03g14916 Brassica carinata
BcaB05g24695 Brassica carinata
BcaC03g15314 Brassica carinata
BcaC08g46634 Brassica carinata
BcaC08g46636 Brassica carinata
BolC2t08974H Brassica oleracea
BolC6t39656H Brassica oleracea
BraA02t06805Z Brassica rapa
BraA07t31377Z Brassica rapa
C02p29240 Brassica napus
C06p46040 Brassica napus
CAN.G199.10 Capsicum annuum
CAN.G493.1 Capsicum annuum
CANSAT56G2356 Cannabis sativa
CANSAT64G1217 Cannabis sativa
CARHR064760 Cardamine hirsuta
Carub.0002s1873 Capsella rubella
Ca_02751_v3 Cicer arietinum L.
Cc10_g10370 Coffea canephora
Cc10_g10780 Coffea canephora
CDE06G2501 Ceratophyllum demersum
CDE08G0273 Ceratophyllum demersum
Cfa013847 Carpinus fangiana
Ciclev10002870m.g Citrus clementina
Ciclev10007132m.g Citrus clementina
CiPaw.07G159900 Carya illinoinensis
ClCG09G010270 Citrullus lanatus
ClCG09G010610 Citrullus lanatus
ClCG09G010620 Citrullus lanatus
ClCG11G008120 Citrullus lanatus
COL.COLO4_04234 Corchorus olitorius
Cpa.g.sc66.42 Carica papaya
CsaV3_2G033500 Cucumis sativus L.
CsaV3_7G023810 Cucumis sativus L.
CsaV3_7G024410 Cucumis sativus L.
CsaV3_7G024420 Cucumis sativus L.
CSS0002953 Camellia sinensis var. sinensis
CSS0005693 Camellia sinensis var. sinensis
CSS0008856 Camellia sinensis var. sinensis
DCAR_014361 Daucus carota
Dinv03390 Davidia involucrata
Dinv17646 Davidia involucrata
Dinv41714 Davidia involucrata
Duzib177G0476 Durio zibethinus
ECA232G2068 Erigeron canadensis
ECA246G3330 Erigeron canadensis
ECA246G4702 Erigeron canadensis
EL10Ac1g00087 Beta vulgaris
Eucgr.F02610 Eucalyptus grandis
FAN02G3522 Fragaria x ananassa
FAN05G3939 Fragaria x ananassa
FAN09G2657 Fragaria x ananassa
FAN09G3472 Fragaria x ananassa
FAN14G4728 Fragaria x ananassa
FAN14G5726 Fragaria x ananassa
FvH4_6g27290 Fragaria vesca
FvH4_6g27310 Fragaria vesca
Glyma.02G158200 Glycine max
Gohir.A13G121200 Gossypium hirsutum
Gohir.D13G125300 Gossypium hirsutum
Gorai.013G140200 Gossypium raimondii
GSVIVG01012792001 Vitis vinifera
HanXRQChr05g0150061 Helianthus annuus
HanXRQChr05g0150261 Helianthus annuus
HanXRQChr09g0260341 Helianthus annuus
Haze_22521 Corylus avellana
Hma1.2p1_0342F.1_g130730 Hydrangea macrophylla
HPP92_000073 Vanilla planifolia
HPP92_001081 Vanilla planifolia
HPP92_003143 Vanilla planifolia
HPP92_003146 Vanilla planifolia
HPP92_006842 Vanilla planifolia
HPP92_025042 Vanilla planifolia
Hund16797 Selenicereus undatus
Lalb_Chr01g0010201 Lupinus albus
Lalb_Chr19g0129441 Lupinus albus
Lalb_Chr19g0129451 Lupinus albus
Lj5g0010218 Lotus japonicus
Lj7A290T41 Lonicera japonica
Lsat_1_v5_gn_6_110641 Lactuca sativa
Manes.02G192300 Manihot esculenta
Manes.12G089294 Manihot esculenta
Manes.18G101100 Manihot esculenta
Mapoly0036s0083 Marchantia polymorpha
MBI09_g01930_MAGBIO Magnolia biondii
MBI09_g40923_MAGBIO Magnolia biondii
MBI16_g07669_MAGBIO Magnolia biondii
MD05G1041700 Malus domestica
MD10G1048200 Malus domestica
MD11G1194700 Malus domestica
Medtr1g050640 Medicago truncatula
MELO3C008123.2 Cucumis melo
MELO3C023644.2 Cucumis melo
MELO3C024123.2 Cucumis melo
MELO3C024124.2 Cucumis melo
MELO3C028637.2 Cucumis melo
Migut.N03349 Erythranthe guttata
MSTRG.22452 Avicennia marina
Nitab4.5_0000303g0140 Nicotiana tabacum
Nitab4.5_0000807g0010 Nicotiana tabacum
Nitab4.5_0001018g0040 Nicotiana tabacum
Nitab4.5_0002074g0040 Nicotiana tabacum
Nitab4.5_0002500g0020 Nicotiana tabacum
Nn5g27683 Nelumbo nucifera
Oeu021207.1 Olea europaea
Oeu038195.1 Olea europaea
Oeu039618.1 Olea europaea
Os03g0838500 Oryza sativa ssp. japonica
Os05g0432700 Oryza sativa ssp. japonica
Os07g0438600 Oryza sativa ssp. japonica
Peaxi162Scf00268g01130 Petunia axillaris
Peaxi162Scf00560g00736 Petunia axillaris
PGR042G3867 Punica granatum
PGSC0003DMG400000891 Solanum tuberosum
PGSC0003DMG400026076 Solanum tuberosum
Phvul.007G245700 Phaseolus vulgaris
Potri.013G112800 Populus trichocarpa
Potri.019G083300 Populus trichocarpa
Pp3c22_10010 Physcomitrium patens
Prupe.8G057500 Prunus persica
Psat6g091520 Pisum sativum
PSO017G4343 Papaver somniferum
PSO063G2175 Papaver somniferum
QL02p033706 Quercus lobata
RcHm_v2.0_Chr2g0129441 Rosa chinensis
Rhsim06G0096300 Rhododendron simsii
Sabra10G0094400 Salix brachista
Sabra11G0049800 Salix brachista
Sabra11G0052500 Salix brachista
Sabra13G0095600 Salix brachista
Sabra15G0037700 Salix brachista
Sabra15G0067400 Salix brachista
Sabra16G0264300 Salix brachista
Sabra19G0072000 Salix brachista
SalBow6G2274 Salvia bowleyana
Sc23g0001260 Simmondsia chinensis
Sed0001630 Sechium edule
Sed0006671 Sechium edule
Sed0014127 Sechium edule
Sed0020042 Sechium edule
SEGI_17758 Sequoiadendron giganteum
SGA_v2.0_scaffold149G36586 Striga asiatica
SGA_v2.0_scaffold25G11069 Striga asiatica
SMO352G0015 Selaginella moellendorffii
Solyc06g065370.3 Solanum lycopersicum
Solyc11g018590.1 Solanum lycopersicum
Sopen06g023850 Solanum pennellii
Sopen11g009560 Solanum pennellii
Sp5g27020 Schrenkiella parvula
TAR381G1195 Trochodendron aralioides
TAR629G2871 Trochodendron aralioides
THA.LOC104800113 Tarenaya hassleriana
THA.LOC104809742 Tarenaya hassleriana
Thecc.08G183900 Theobroma cacao
Thhalv10019318m.g Eutrema salsugineum
TPR.G22711 Trifolium pratense
TWI53G0775 Tripterygium wilfordii
TWI74G0020 Tripterygium wilfordii
unitig_0.g918 Utricularia gibba
unitig_61.g26074 Utricularia gibba
vmacro12490 Vaccinium macrocarpon
VMungo0720G2071 Vigna mungo
Zm00001eb096790 Zea mays
Zm00001eb211080 Zea mays
Zm00001eb289210 Zea mays
Zm00001eb306170 Zea mays

User provided reference genes

Program Settings