Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p26850 Brassica napus
A10p32390 Brassica napus
Actinidia07207 Actinidia chinensis
Actinidia11335 Actinidia chinensis
Actinidia24179 Actinidia chinensis
Actinidia35448 Actinidia chinensis
Actinidia37099 Actinidia chinensis
AL5G22960 Arabidopsis lyrata
AL6G13230 Arabidopsis lyrata
Aqoxy2G01397 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.AP4865 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.NCX3KP Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.T88YYN Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.X8LT49 Arachis hypogaea
AT3G44735 Arabidopsis thaliana
ATR0820G192 Amborella trichopoda
Atru.chr3.3378 Acer truncatum
Atru.chr8.1631 Acer truncatum
BolC1t03395H Brassica oleracea
BolC9t60056H Brassica oleracea
BraA01t02615Z Brassica rapa
BraA10t45279Z Brassica rapa
C01p34270 Brassica napus
C09p51010 Brassica napus
C09p73210 Brassica napus
CAN.G644.31 Capsicum annuum
CAN.G919.7 Capsicum annuum
CANSAT54G1542 Cannabis sativa
CANSAT80G1673 Cannabis sativa
CARHR151430 Cardamine hirsuta
CARHR209590 Cardamine hirsuta
Carub.0005s1042 Capsella rubella
Carub.0006s0262 Capsella rubella
Carub.0015s0003 Capsella rubella
Cc01_g09790 Coffea canephora
Cc06_g05290 Coffea canephora
Cfa010081 Carpinus fangiana
Ciclev10003706m.g Citrus clementina
Ciclev10013197m.g Citrus clementina
Ciclev10029683m.g Citrus clementina
CiPaw.09G008800 Carya illinoinensis
CiPaw.10G005500 Carya illinoinensis
CiPaw.13G141100 Carya illinoinensis
CiPaw.14G103500 Carya illinoinensis
COL.COLO4_19298 Corchorus olitorius
Cpa.g.sc5.75 Carica papaya
CSS0006810 Camellia sinensis var. sinensis
CSS0049961 Camellia sinensis var. sinensis
CSS0050359 Camellia sinensis var. sinensis
DCAR_006146 Daucus carota
Dinv12522 Davidia involucrata
Dinv19830 Davidia involucrata
Dinv21253 Davidia involucrata
Dinv29425 Davidia involucrata
Duzib093G0672 Durio zibethinus
Duzib106G0076 Durio zibethinus
Duzib106G0171 Durio zibethinus
Duzib128G0603 Durio zibethinus
Duzib150G0771 Durio zibethinus
Duzib168G0884 Durio zibethinus
ECA233G0462 Erigeron canadensis
EL10Ac9g21084 Beta vulgaris
Eucgr.A01541 Eucalyptus grandis
Eucgr.B03895 Eucalyptus grandis
FAN02G0871 Fragaria x ananassa
FAN05G2107 Fragaria x ananassa
FAN05G2814 Fragaria x ananassa
FAN09G1254 Fragaria x ananassa
FAN11G3796 Fragaria x ananassa
FAN14G5394 Fragaria x ananassa
FAN16G1639 Fragaria x ananassa
FAN21G0140 Fragaria x ananassa
FvH4_3g29900 Fragaria vesca
FvH4_6g17920 Fragaria vesca
Glyma.10G066400 Glycine max
Glyma.12G181700 Glycine max
Glyma.13G151500 Glycine max
Glyma.13G319200 Glycine max
Gohir.A01G209100 Gossypium hirsutum
Gohir.A01G209200 Gossypium hirsutum
Gohir.A04G066114 Gossypium hirsutum
Gohir.A07G107300 Gossypium hirsutum
Gohir.A09G093200 Gossypium hirsutum
Gohir.D01G198200 Gossypium hirsutum
Gohir.D01G198300 Gossypium hirsutum
Gohir.D07G111300 Gossypium hirsutum
Gohir.D09G093000 Gossypium hirsutum
Gorai.001G119600 Gossypium raimondii
Gorai.002G242400 Gossypium raimondii
Gorai.002G242500 Gossypium raimondii
Gorai.006G109700 Gossypium raimondii
GSVIVG01031398001 Vitis vinifera
GSVIVG01033785001 Vitis vinifera
HanXRQChr13g0396991 Helianthus annuus
Haze_23447 Corylus avellana
Hund00782 Selenicereus undatus
Lalb_Chr02g0155181 Lupinus albus
Lalb_Chr14g0374201 Lupinus albus
Lalb_Chr22g0350641 Lupinus albus
Lj3g0011252 Lotus japonicus
Lj5g0022060 Lotus japonicus
Lsat_1_v5_gn_6_41120 Lactuca sativa
Manes.08G021100 Manihot esculenta
Manes.09G058940 Manihot esculenta
Manes.11G157100 Manihot esculenta
MD03G1134700 Malus domestica
MD11G1157500 Malus domestica
MD12G1018200 Malus domestica
MD14G1016200 Malus domestica
Medtr1g061120 Medicago truncatula
Medtr2g084855 Medicago truncatula
Migut.N02515 Erythranthe guttata
MSTRG.17729 Avicennia marina
MSTRG.21061 Avicennia marina
Nitab4.5_0000132g0150 Nicotiana tabacum
Nitab4.5_0000663g0130 Nicotiana tabacum
Nitab4.5_0006360g0020 Nicotiana tabacum
Nitab4.5_0010833g0010 Nicotiana tabacum
Nn2g14004 Nelumbo nucifera
Nn6g35042 Nelumbo nucifera
Oeu001652.1 Olea europaea
Oeu040536.1 Olea europaea
Oeu050182.1 Olea europaea
Peaxi162Scf00110g02023 Petunia axillaris
Peaxi162Scf00157g00066 Petunia axillaris
Peaxi162Scf00433g00025 Petunia axillaris
Peaxi162Scf00789g00618 Petunia axillaris
PGR004G1125 Punica granatum
PGR102G0577 Punica granatum
PGSC0003DMG400002682 Solanum tuberosum
PGSC0003DMG400007123 Solanum tuberosum
PGSC0003DMG400026535 Solanum tuberosum
PGSC0003DMG400028173 Solanum tuberosum
Phvul.005G127200 Phaseolus vulgaris
Phvul.007G223101 Phaseolus vulgaris
Potri.004G188200 Populus trichocarpa
Potri.009G148900 Populus trichocarpa
Prupe.7G116900 Prunus persica
Psat7g007360 Pisum sativum
PSO063G0377 Papaver somniferum
PSO339G1716 Papaver somniferum
PSO339G5919 Papaver somniferum
PSO384G0932 Papaver somniferum
QL01p013692 Quercus lobata
QL07p040518 Quercus lobata
RcHm_v2.0_Chr3g0472171 Rosa chinensis
RcHm_v2.0_Chr5g0055241 Rosa chinensis
Rhsim01G0208400 Rhododendron simsii
Rhsim03G0081200 Rhododendron simsii
Rhsim13G0105100 Rhododendron simsii
Sabra04G0127200 Salix brachista
Sabra09G0117500 Salix brachista
SalBow3G0501 Salvia bowleyana
SalBow3G0913 Salvia bowleyana
SalBow6G4256 Salvia bowleyana
Sc12g0004160 Simmondsia chinensis
Sc12g0004180 Simmondsia chinensis
Solyc06g074540.4 Solanum lycopersicum
Solyc10g083580.2 Solanum lycopersicum
Solyc11g066880.2 Solanum lycopersicum
Sopen06g031010 Solanum pennellii
Sopen09g003840 Solanum pennellii
Sopen10g033060 Solanum pennellii
Sopen11g026590 Solanum pennellii
Sp5g16440 Schrenkiella parvula
Sp6g39010 Schrenkiella parvula
TAR369G1123 Trochodendron aralioides
TAR633G1338 Trochodendron aralioides
TAR636G1780 Trochodendron aralioides
THA.LOC104799535 Tarenaya hassleriana
Thecc.05G081300 Theobroma cacao
Thecc.09G291500 Theobroma cacao
Thhalv10002908m.g Eutrema salsugineum
Thhalv10015130m.g Eutrema salsugineum
TPR.G32386 Trifolium pratense
TPR.G5649 Trifolium pratense
TWI74G0799 Tripterygium wilfordii
TWI75G0377 Tripterygium wilfordii
TWI77G0164 Tripterygium wilfordii
TWI79G1201 Tripterygium wilfordii
vmacro03277 Vaccinium macrocarpon
vmacro07360 Vaccinium macrocarpon
vmacro23105 Vaccinium macrocarpon
vmacro23109 Vaccinium macrocarpon

User provided reference genes

Program Settings