Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p14960 Brassica napus
A03p54630 Brassica napus
A08p21950 Brassica napus
Aa31LG6G6900 Aethionema arabicum
Aa31LG9G10990 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_340.154 Anthoceros agrestis
Ah.15g093700 Amaranthus hybridus
AL7G29700 Arabidopsis lyrata
Aqoxy1G00571 Aquilegia oxysepala
Aqoxy5G00880 Aquilegia oxysepala
Aqoxy5G02199 Aquilegia oxysepala
Aqoxy94s001 Aquilegia oxysepala
Aqoxy94s003 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.1L5CCL Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.686LQU Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.DDPE54 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.G2KDP7 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.KM1SID Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Z9T1G4 Arachis hypogaea
AT4G23660 Arabidopsis thaliana
ATR1100G008 Amborella trichopoda
Atru.chr11.479 Acer truncatum
AUR62034614 Chenopodium quinoa
AUR62036656 Chenopodium quinoa
BcaB03g12405 Brassica carinata
BcaC01g00486 Brassica carinata
BcaC09g50959 Brassica carinata
BcaNung01074 Brassica carinata
BcaNung03181 Brassica carinata
BcaNung03441 Brassica carinata
BolC1t01805H Brassica oleracea
BolC3t20296H Brassica oleracea
BolC7t45794H Brassica oleracea
BraA01t01437Z Brassica rapa
BraA03t14530Z Brassica rapa
C01p18750 Brassica napus
C03p80510 Brassica napus
C03p80520 Brassica napus
C07p52950 Brassica napus
CAN.G781.16 Capsicum annuum
CANSAT78G0298 Cannabis sativa
CARHR231030 Cardamine hirsuta
Carub.0007s1748 Capsella rubella
Ca_07785_v3 Cicer arietinum L.
CBR_g4211 Chara braunii
CBR_g5669 Chara braunii
Cc00_g30150 Coffea canephora
Cc00_g32230 Coffea canephora
Cc04_g13880 Coffea canephora
Cc04_g13890 Coffea canephora
Cc04_g13900 Coffea canephora
Cc04_g13930 Coffea canephora
Cc04_g15800 Coffea canephora
CDE05G3331 Ceratophyllum demersum
Cfa008732 Carpinus fangiana
Cfa021958 Carpinus fangiana
Ciclev10031746m.g Citrus clementina
CiPaw.05G168300 Carya illinoinensis
ClCG10G011930 Citrullus lanatus
COL.COLO4_10100 Corchorus olitorius
COL.COLO4_24060 Corchorus olitorius
Cpa.g.sc5.29 Carica papaya
Cpa.g.sc5.31 Carica papaya
Cre06.g291800 Chlamydomonas reinhardtii
CsaV3_3G031430 Cucumis sativus L.
CSS0044819 Camellia sinensis var. sinensis
DCAR_026463 Daucus carota
DCAR_026464 Daucus carota
DCAR_027769 Daucus carota
DCAR_029703 Daucus carota
Dinv17603 Davidia involucrata
Duzib132G0180 Durio zibethinus
Duzib132G0191 Durio zibethinus
ECA233G3748 Erigeron canadensis
EL10Ac7g17368 Beta vulgaris
Eucgr.G01369 Eucalyptus grandis
Eucgr.H03234 Eucalyptus grandis
FAN07G0518 Fragaria x ananassa
FAN12G4043 Fragaria x ananassa
FAN17G0528 Fragaria x ananassa
FvH4_4g36840 Fragaria vesca
Glyma.09G272651 Glycine max
Glyma.18G216400 Glycine max
Gohir.A12G134500 Gossypium hirsutum
Gohir.A12G137450 Gossypium hirsutum
Gohir.A12G137600 Gossypium hirsutum
Gohir.A12G137650 Gossypium hirsutum
Gohir.D12G138100 Gossypium hirsutum
Gohir.D12G141600 Gossypium hirsutum
Gorai.008G149600 Gossypium raimondii
Gorai.008G153000 Gossypium raimondii
GSVIVG01012037001 Vitis vinifera
HanXRQChr11g0332851 Helianthus annuus
Haze_11743 Corylus avellana
Haze_26705 Corylus avellana
HPP92_014779 Vanilla planifolia
Hund23867 Selenicereus undatus
Lalb_Chr12g0204281 Lupinus albus
Lalb_Chr12g0204291 Lupinus albus
Lalb_Chr12g0205351 Lupinus albus
Lj1g0011441 Lotus japonicus
Lj1g0013770 Lotus japonicus
Lj2g0000279 Lotus japonicus
Lj8A264T57 Lonicera japonica
Lsat_1_v5_gn_6_17921 Lactuca sativa
Manes.01G040712 Manihot esculenta
Mapoly0100s0056 Marchantia polymorpha
MCO12G284 Micromonas commoda
MD11G1112600 Malus domestica
MD11G1112700 Malus domestica
MD15G1355200 Malus domestica
MD16G1001300 Malus domestica
Medtr3g111660 Medicago truncatula
Medtr7g073970 Medicago truncatula
MELO3C024026.2 Cucumis melo
Migut.H00604 Erythranthe guttata
Migut.I00018 Erythranthe guttata
Migut.N01582 Erythranthe guttata
MSTRG.11446 Avicennia marina
Nitab4.5_0000852g0010 Nicotiana tabacum
Nitab4.5_0005862g0050 Nicotiana tabacum
Nn2g14220 Nelumbo nucifera
Nn2g14543 Nelumbo nucifera
Oeu024760.1 Olea europaea
Os08g0322600 Oryza sativa ssp. japonica
Os08g0388900 Oryza sativa ssp. japonica
Os08g0389300 Oryza sativa ssp. japonica
Peaxi162Scf00017g02835 Petunia axillaris
PGR044G0777 Punica granatum
PGSC0003DMG400024499 Solanum tuberosum
Phvul.008G080300 Phaseolus vulgaris
Potri.005G093600 Populus trichocarpa
Potri.005G093700 Populus trichocarpa
Pp3c17_13460 Physcomitrium patens
PRCOL_00006084 Prasinoderma coloniale
Prupe.1G346400 Prunus persica
Prupe.1G346500 Prunus persica
Prupe.4G276200 Prunus persica
PSO170G1927 Papaver somniferum
PSO384G3023 Papaver somniferum
QL03p042814 Quercus lobata
QL03p058539 Quercus lobata
QL08p053645 Quercus lobata
QL08p053649 Quercus lobata
RcHm_v2.0_Chr4g0446591 Rosa chinensis
RcHm_v2.0_Chr5g0044851 Rosa chinensis
RcHm_v2.0_Chr5g0044921 Rosa chinensis
RcHm_v2.0_Chr5g0044931 Rosa chinensis
RcHm_v2.0_Chr5g0044971 Rosa chinensis
Rhsim09G0044700 Rhododendron simsii
RhsimUnG0157000 Rhododendron simsii
Sabra05G0077500 Salix brachista
SalBow1G2569 Salvia bowleyana
SalBow1G6149 Salvia bowleyana
Sc23g0003470 Simmondsia chinensis
Sed0012155 Sechium edule
Sed0024199 Sechium edule
SEGI_11824 Sequoiadendron giganteum
SEGI_19125 Sequoiadendron giganteum
SEGI_29356 Sequoiadendron giganteum
SEGI_31034 Sequoiadendron giganteum
SGA_v2.0_scaffold90G27943 Striga asiatica
SMO164G0212 Selaginella moellendorffii
Solyc03g114300.4 Solanum lycopersicum
Sopen03g033400 Solanum pennellii
Sp7g21590 Schrenkiella parvula
TAR374G0013 Trochodendron aralioides
TAR374G0876 Trochodendron aralioides
TAR374G1156 Trochodendron aralioides
TAR374G1448 Trochodendron aralioides
THA.LOC104814817 Tarenaya hassleriana
Thecc.02G161400 Theobroma cacao
Thecc.02G176000 Theobroma cacao
Thhalv10025345m.g Eutrema salsugineum
TPR.G23229 Trifolium pratense
TPR.G24330 Trifolium pratense
TPR.G35100 Trifolium pratense
TWI53G1336 Tripterygium wilfordii
TWI53G1840 Tripterygium wilfordii
unitig_52.g17488 Utricularia gibba
vmacro07295 Vaccinium macrocarpon
vmacro10898 Vaccinium macrocarpon
VMungo1383G1042 Vigna mungo
Zm00001eb190740 Zea mays

User provided reference genes

Program Settings