Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p02730 Brassica napus
A08p37710 Brassica napus
A09p01170 Brassica napus
Aa31LG1G10210 Aethionema arabicum
Aa31LG5G1330 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.76 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.2153 Anthoceros agrestis
Actinidia06418 Actinidia chinensis
Ah.08g218400 Amaranthus hybridus
Ah.15g095460 Amaranthus hybridus
AL1G11630 Arabidopsis lyrata
AL1G11640 Arabidopsis lyrata
AL6G51730 Arabidopsis lyrata
Aqoxy2G02610 Aquilegia oxysepala
Aqoxy2G02612 Aquilegia oxysepala
Aqoxy2G02613 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.00ZDTM Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.07ATAK Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.8L6AK6 Arachis hypogaea
AT1G02300 Arabidopsis thaliana
AT1G02305 Arabidopsis thaliana
AT4G01610 Arabidopsis thaliana
ATR0796G236 Amborella trichopoda
Atru.chr5.821 Acer truncatum
Atru.chr5.822 Acer truncatum
Atru.chr5.823 Acer truncatum
AUR62001249 Chenopodium quinoa
AUR62022081 Chenopodium quinoa
BcaB01g02127 Brassica carinata
BcaB01g06137 Brassica carinata
BcaB03g13517 Brassica carinata
BcaC02g12465 Brassica carinata
BcaC04g24082 Brassica carinata
BcaC06g35601 Brassica carinata
BolC3t12578H Brassica oleracea
BolC3t12579H Brassica oleracea
BolC4t21970H Brassica oleracea
BolC7t41802H Brassica oleracea
BolC8t46806H Brassica oleracea
BolC9t53059H Brassica oleracea
BraA07t28072Z Brassica rapa
BraA08t35667Z Brassica rapa
BraA09t35787Z Brassica rapa
C03p00130 Brassica napus
C04p03330 Brassica napus
C07p13080 Brassica napus
C08p00070 Brassica napus
C09p01250 Brassica napus
CAN.G1153.3 Capsicum annuum
CAN.G1222.10 Capsicum annuum
CAN.G1222.11 Capsicum annuum
CAN.G1222.12 Capsicum annuum
CAN.G1222.15 Capsicum annuum
CAN.G1222.16 Capsicum annuum
CAN.G1222.7 Capsicum annuum
CAN.G1222.9 Capsicum annuum
CAN.G1629.1 Capsicum annuum
CAN.G758.10 Capsicum annuum
CANSAT11G2508 Cannabis sativa
CARHR001600 Cardamine hirsuta
CARHR001610 Cardamine hirsuta
CARHR001830 Cardamine hirsuta
CARHR001840 Cardamine hirsuta
CARHR250060 Cardamine hirsuta
Carub.0001s0134 Capsella rubella
Carub.0006s3558 Capsella rubella
Ca_09258_v3 Cicer arietinum L.
Ca_09259_v3 Cicer arietinum L.
CBR_g2790 Chara braunii
Cc02_g27650 Coffea canephora
Cc02_g27660 Coffea canephora
Cc02_g27670 Coffea canephora
Cc02_g27680 Coffea canephora
CDE05G0438 Ceratophyllum demersum
Cfa004932 Carpinus fangiana
Ciclev10020859m.g Citrus clementina
CiPaw.07G128200 Carya illinoinensis
ClCG10G013270 Citrullus lanatus
COL.COLO4_23087 Corchorus olitorius
Cpa.g.sc57.55 Carica papaya
CsaV3_3G043370 Cucumis sativus L.
CSS0030537 Camellia sinensis var. sinensis
DCAR_002344 Daucus carota
DCAR_030726 Daucus carota
Dinv03516 Davidia involucrata
Duzib133G0965 Durio zibethinus
Duzib138G0796 Durio zibethinus
EL10Ac7g18033 Beta vulgaris
Eucgr.A00982 Eucalyptus grandis
FAN19G1627 Fragaria x ananassa
FAN23G1381 Fragaria x ananassa
FAN28G0860 Fragaria x ananassa
FvH4_1g25910 Fragaria vesca
Glyma.03G226300 Glycine max
Glyma.19G223300 Glycine max
Gohir.A11G047400 Gossypium hirsutum
Gohir.A11G103300 Gossypium hirsutum
Gohir.D11G050925 Gossypium hirsutum
Gohir.D11G051000 Gossypium hirsutum
Gohir.D11G107766 Gossypium hirsutum
Gorai.007G055400 Gossypium raimondii
Gorai.007G115600 Gossypium raimondii
GSVIVG01028272001 Vitis vinifera
Haze_05172 Corylus avellana
Haze_05173 Corylus avellana
Haze_05174 Corylus avellana
Hma1.2p1_0098F.1_g048300 Hydrangea macrophylla
HPP92_017316 Vanilla planifolia
Hund05614 Selenicereus undatus
Hund18513 Selenicereus undatus
Lalb_Chr04g0260241 Lupinus albus
Lalb_Chr18g0046281 Lupinus albus
Lj1g0024084 Lotus japonicus
Lju2566A1T38 Lonicera japonica
Manes.01G236900 Manihot esculenta
Manes.05G006300 Manihot esculenta
Mapoly0032s0066 Marchantia polymorpha
MBI18_g38881_MAGBIO Magnolia biondii
MCO07G172 Micromonas commoda
MCO12G336 Micromonas commoda
MD03G1040800 Malus domestica
MD17G1285700 Malus domestica
Medtr7g111050 Medicago truncatula
Medtr7g111060 Medicago truncatula
MELO3C026898.2 Cucumis melo
Migut.D00004 Erythranthe guttata
MSTRG.21732 Avicennia marina
Nitab4.5_0002056g0060 Nicotiana tabacum
Nitab4.5_0002463g0040 Nicotiana tabacum
Nn4g25264 Nelumbo nucifera
Oeu060888.1 Olea europaea
Oeu060889.1 Olea europaea
Os05g0310500 Oryza sativa ssp. japonica
Peaxi162Scf00149g00919 Petunia axillaris
Peaxi162Scf00149g01016 Petunia axillaris
PGR042G0131 Punica granatum
PGSC0003DMG400010362 Solanum tuberosum
Phvul.001G220100 Phaseolus vulgaris
Potri.002G184201 Populus trichocarpa
Potri.002G184300 Populus trichocarpa
Potri.014G109801 Populus trichocarpa
Pp3c10_7510 Physcomitrium patens
Pp3c14_8830 Physcomitrium patens
Pp3c2_6240 Physcomitrium patens
Prupe.3G000200 Prunus persica
Psat3g015680 Pisum sativum
Psat3g015720 Pisum sativum
PSO210G0649 Papaver somniferum
PSO210G2167 Papaver somniferum
PSO761G0307 Papaver somniferum
QL01p026787 Quercus lobata
QL01p026795 Quercus lobata
RcHm_v2.0_Chr3g0485051 Rosa chinensis
Rhsim01G0001600 Rhododendron simsii
Sabra02G0131500 Salix brachista
Sabra02G0131600 Salix brachista
Sc05g0003530 Simmondsia chinensis
Sed0003001 Sechium edule
Sed0014336 Sechium edule
SGA_v2.0_scaffold80G25671 Striga asiatica
SMO351G0395 Selaginella moellendorffii
Solyc02g069090.3 Solanum lycopersicum
Solyc02g069100.4 Solanum lycopersicum
Solyc02g069110.4 Solanum lycopersicum
Solyc03g150157.1 Solanum lycopersicum
Sopen02g018190 Solanum pennellii
Sopen02g018230 Solanum pennellii
Sopen02g018240 Solanum pennellii
Sp1g01380 Schrenkiella parvula
Sp6g01520 Schrenkiella parvula
TAR636G2991 Trochodendron aralioides
TAR636G3591 Trochodendron aralioides
THA.LOC104815908 Tarenaya hassleriana
THA.LOC104825920 Tarenaya hassleriana
Thecc.01G328600 Theobroma cacao
Thecc.01G328700 Theobroma cacao
Thhalv10008009m.g Eutrema salsugineum
Thhalv10028753m.g Eutrema salsugineum
TPR.G8367 Trifolium pratense
TWI23G0544 Tripterygium wilfordii
unitig_578.g16650 Utricularia gibba
vmacro02353 Vaccinium macrocarpon
VMungo1383G0455 Vigna mungo
Zm00001eb322580 Zea mays

User provided reference genes

Program Settings