Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p03820 Brassica napus
A05p02310 Brassica napus
A09p50150 Brassica napus
Aa31LG10G12120 Aethionema arabicum
Aa31LG1G23510 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.4057 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.2027 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.1663 Anthoceros agrestis
Actinidia17677 Actinidia chinensis
Actinidia38142 Actinidia chinensis
Actinidia39193 Actinidia chinensis
Ah.13g076780 Amaranthus hybridus
AL4G39580 Arabidopsis lyrata
AL5G38710 Arabidopsis lyrata
Aqoxy2G02041 Aquilegia oxysepala
Aqoxy6G01654 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0DR8LC Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.G7Z7YE Arachis hypogaea
AT2G41490 Arabidopsis thaliana
AT3G57220 Arabidopsis thaliana
ATR0782G053 Amborella trichopoda
Atru.chr1.1193 Acer truncatum
Atru.chr6.1381 Acer truncatum
AUR62004393 Chenopodium quinoa
AUR62022599 Chenopodium quinoa
AUR62024529 Chenopodium quinoa
AUR62026121 Chenopodium quinoa
BcaB02g08329 Brassica carinata
BcaC02g09904 Brassica carinata
BcaC02g11255 Brassica carinata
BcaC07g40064 Brassica carinata
BcaC09g48688 Brassica carinata
BcaNung06569 Brassica carinata
BcaNung06793 Brassica carinata
BNapus_Darmor_BZH_scaffold_38p00040 Brassica napus
BolC4t21915H Brassica oleracea
BolC4t23402H Brassica oleracea
BolC4t25088H Brassica oleracea
BolC8t50867H Brassica oleracea
BraA04t16052Z Brassica rapa
BraA05t19226Z Brassica rapa
BraA09t40467Z Brassica rapa
C04p02750 Brassica napus
C04p35340 Brassica napus
C08p32520 Brassica napus
CAN.G1237.3 Capsicum annuum
CANSAT80G1359 Cannabis sativa
CANSAT80G1617 Cannabis sativa
CARHR136610 Cardamine hirsuta
CARHR167400 Cardamine hirsuta
Carub.0004s2379 Capsella rubella
Carub.0005s2403 Capsella rubella
Ca_25790_v3 Cicer arietinum L.
CBR_g48687 Chara braunii
Cc06_g18360 Coffea canephora
CDE08G1337 Ceratophyllum demersum
Cfa016754 Carpinus fangiana
Cfa024885 Carpinus fangiana
Ciclev10005020m.g Citrus clementina
CiPaw.09G042200 Carya illinoinensis
CiPaw.10G036600 Carya illinoinensis
ClCG04G004010 Citrullus lanatus
COL.COLO4_21300 Corchorus olitorius
Cpa.g.c37387 Carica papaya
Cpa.g.sc120.7 Carica papaya
Cre16.g663100 Chlamydomonas reinhardtii
CsaV3_4G027630 Cucumis sativus L.
CSS0009879 Camellia sinensis var. sinensis
CSS0019779 Camellia sinensis var. sinensis
DCAR_016970 Daucus carota
DCAR_020539 Daucus carota
Dinv05312 Davidia involucrata
Dinv34246 Davidia involucrata
Duzib106G0923 Durio zibethinus
Duzib128G1723 Durio zibethinus
ECA233G5682 Erigeron canadensis
EL10Ac3g07158 Beta vulgaris
Eucgr.A02296 Eucalyptus grandis
FAN02G1973 Fragaria x ananassa
FAN05G1357 Fragaria x ananassa
FAN09G1292 Fragaria x ananassa
FAN14G5242 Fragaria x ananassa
FvH4_6g24760 Fragaria vesca
Glyma.02G190700 Glycine max
Glyma.10G105900 Glycine max
Gohir.A09G119800 Gossypium hirsutum
Gohir.D09G116000 Gossypium hirsutum
Gorai.006G134300 Gossypium raimondii
GSVIVG01033552001 Vitis vinifera
HanXRQChr10g0277771 Helianthus annuus
Haze_19750 Corylus avellana
Haze_26500 Corylus avellana
HPP92_001282 Vanilla planifolia
Hund19125 Selenicereus undatus
Lalb_Chr02g0156411 Lupinus albus
Lalb_Chr21g0316601 Lupinus albus
Lj1A1122T44 Lonicera japonica
Lj2A390G27 Lonicera japonica
Lj5g0015883 Lotus japonicus
Lsat_1_v5_gn_6_15201 Lactuca sativa
Manes.08G053600 Manihot esculenta
Mapoly0120s0027 Marchantia polymorpha
MBI05_g15360_MAGBIO Magnolia biondii
MBI13_g04792_MAGBIO Magnolia biondii
MCO05G206 Micromonas commoda
MD12G1086200 Malus domestica
MD14G1080600 Malus domestica
Medtr0012s0090 Medicago truncatula
Medtr3g045150 Medicago truncatula
Medtr8g446850 Medicago truncatula
MELO3C014202.2 Cucumis melo
Migut.J01706 Erythranthe guttata
Migut.K00119 Erythranthe guttata
MSTRG.10801 Avicennia marina
MSTRG.26143 Avicennia marina
Nitab4.5_0000826g0260 Nicotiana tabacum
Nitab4.5_0001618g0330 Nicotiana tabacum
Nn6g34910 Nelumbo nucifera
Nn7g37216 Nelumbo nucifera
Oeu006922.2 Olea europaea
Os07g0661100 Oryza sativa ssp. japonica
Peaxi162Scf00130g01015 Petunia axillaris
PGR004G2716 Punica granatum
PGSC0003DMG400012722 Solanum tuberosum
Phvul.007G249500 Phaseolus vulgaris
Potri.006G045700 Populus trichocarpa
Potri.016G042100 Populus trichocarpa
Pp3c1_19750 Physcomitrium patens
Pp3c2_18380 Physcomitrium patens
PRCOL_00006546 Prasinoderma coloniale
Prupe.1G032300 Prunus persica
Prupe.7G050100 Prunus persica
Psat6g009800 Pisum sativum
Psat6g050760 Pisum sativum
Psat6g118200 Pisum sativum
PSO339G5696 Papaver somniferum
PSO384G1999 Papaver somniferum
QL07p005086 Quercus lobata
RcHm_v2.0_Chr3g0484361 Rosa chinensis
RcHm_v2.0_Chr3g0484421 Rosa chinensis
RcHm_v2.0_Chr3g0484511 Rosa chinensis
Rhsim03G0031000 Rhododendron simsii
Rhsim04G0107900 Rhododendron simsii
Sabra16G0047800 Salix brachista
SalBow1G2954 Salvia bowleyana
Sc13g0001500 Simmondsia chinensis
Sed0006234 Sechium edule
Sed0013360 Sechium edule
SEGI_04340 Sequoiadendron giganteum
SEGI_25729 Sequoiadendron giganteum
SGA_v2.0_scaffold105G30359 Striga asiatica
SGA_v2.0_scaffold69G23130 Striga asiatica
SHI12878 Sapria himalayana
SMO112G0012 Selaginella moellendorffii
SMO112G0048 Selaginella moellendorffii
SMO364G0515 Selaginella moellendorffii
Solyc04g016520.3 Solanum lycopersicum
Sopen04g008590 Solanum pennellii
Sp4g23760 Schrenkiella parvula
Sp5g05360 Schrenkiella parvula
TAR633G2274 Trochodendron aralioides
TAR636G0750 Trochodendron aralioides
THA.LOC104803288 Tarenaya hassleriana
THA.LOC104816968 Tarenaya hassleriana
Thecc.05G145300 Theobroma cacao
Thhalv10005999m.g Eutrema salsugineum
Thhalv10007732m.g Eutrema salsugineum
Thhalv10016688m.g Eutrema salsugineum
TPR.G11551 Trifolium pratense
TPR.G13517 Trifolium pratense
TPR.G19664 Trifolium pratense
TPR.G2297 Trifolium pratense
TPR.G2316 Trifolium pratense
TPR.G39825 Trifolium pratense
TPR.G40499 Trifolium pratense
TWI53G1619 Tripterygium wilfordii
TWI74G0940 Tripterygium wilfordii
TWI77G0796 Tripterygium wilfordii
unitig_748.g7227 Utricularia gibba
vmacro09044 Vaccinium macrocarpon
vmacro09045 Vaccinium macrocarpon
VMungo0720G0943 Vigna mungo
Zm00001eb110840 Zea mays
Zm00001eb329870 Zea mays

User provided reference genes

Program Settings