Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p48670 Brassica napus
A08p23790 Brassica napus
A09p06800 Brassica napus
Aa31LG6G16100 Aethionema arabicum
Aa31LG7G15010 Aethionema arabicum
Aa31sc736G10 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_340.755 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.3723 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.4525 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.3 Anthoceros agrestis
Actinidia05492 Actinidia chinensis
Actinidia20856 Actinidia chinensis
Actinidia35828 Actinidia chinensis
Ah.07g204390 Amaranthus hybridus
AL7G11100 Arabidopsis lyrata
Aqoxy2G03991 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.H3NIN5 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.TF9NF6 Arachis hypogaea
AT4G39160 Arabidopsis thaliana
ATR0564G411 Amborella trichopoda
Atru.chr12.1298 Acer truncatum
Atru.chr12.1559 Acer truncatum
Atru.chr5.3065 Acer truncatum
Atru.chr5.3066 Acer truncatum
AUR62005990 Chenopodium quinoa
AUR62028080 Chenopodium quinoa
BcaB03g12246 Brassica carinata
BcaC04g23559 Brassica carinata
BcaNung02353 Brassica carinata
BcaNung02354 Brassica carinata
BcaNung03888 Brassica carinata
BolC3t20021H Brassica oleracea
BolC7t46745H Brassica oleracea
BolC9t53626H Brassica oleracea
BraA06t27734Z Brassica rapa
BraA08t34331Z Brassica rapa
BraA09t36326Z Brassica rapa
C03p77640 Brassica napus
C07p63340 Brassica napus
C09p07090 Brassica napus
CAN.G809.70 Capsicum annuum
CANSAT11G0250 Cannabis sativa
CANSAT54G2857 Cannabis sativa
CARHR106820 Cardamine hirsuta
CARHR106830 Cardamine hirsuta
CARHR112440 Cardamine hirsuta
CARHR247590 Cardamine hirsuta
Carub.0007s0104 Capsella rubella
Ca_17694_v3 Cicer arietinum L.
CBR_g31667 Chara braunii
Cc09_g05210 Coffea canephora
CDE02G4347 Ceratophyllum demersum
CDE05G1759 Ceratophyllum demersum
CDE06G1699 Ceratophyllum demersum
Cfa005045 Carpinus fangiana
Cfa024558 Carpinus fangiana
Ciclev10027900m.g Citrus clementina
CiPaw.06G133400 Carya illinoinensis
CiPaw.10G121500 Carya illinoinensis
ClCG01G008230 Citrullus lanatus
COL.COLO4_32233 Corchorus olitorius
Cpa.g.sc14.123 Carica papaya
Cre15.g640800 Chlamydomonas reinhardtii
CsaV3_5G020720 Cucumis sativus L.
CSS0038123 Camellia sinensis var. sinensis
DCAR_004344 Daucus carota
Dinv05658 Davidia involucrata
Dinv05659 Davidia involucrata
Dinv13445 Davidia involucrata
Duzib187G1144 Durio zibethinus
Duzib213G0243 Durio zibethinus
ECA234G4722 Erigeron canadensis
EL10Ac3g05170 Beta vulgaris
Eucgr.A01623 Eucalyptus grandis
FAN15G1163 Fragaria x ananassa
FAN15G1290 Fragaria x ananassa
FAN20G1594 Fragaria x ananassa
FAN24G0282 Fragaria x ananassa
FAN24G0708 Fragaria x ananassa
FAN24G2517 Fragaria x ananassa
FAN27G2905 Fragaria x ananassa
FAN27G3438 Fragaria x ananassa
FvH4_2g03360 Fragaria vesca
FvH4_2g03400 Fragaria vesca
FvH4_2g09510 Fragaria vesca
FvH4_2g09520 Fragaria vesca
Glyma.01G228200 Glycine max
Glyma.10G205167 Glycine max
Glyma.10G205233 Glycine max
Glyma.11G010900 Glycine max
Glyma.16G093750 Glycine max
Glyma.20G185167 Glycine max
Glyma.20G185233 Glycine max
Gohir.A09G091100 Gossypium hirsutum
Gohir.D09G091100 Gossypium hirsutum
Gorai.006G107300 Gossypium raimondii
GSVIVG01023816001 Vitis vinifera
HanXRQChr10g0289001 Helianthus annuus
Hma1.2p1_0088F.1_g045220 Hydrangea macrophylla
Hma1.2p1_1073F.1_g254250 Hydrangea macrophylla
HPP92_008918 Vanilla planifolia
HPP92_008919 Vanilla planifolia
HPP92_028201 Vanilla planifolia
Hund09716 Selenicereus undatus
Hund09717 Selenicereus undatus
Lalb_Chr11g0068001 Lupinus albus
Lj6g0022884 Lotus japonicus
Lj8A306T63 Lonicera japonica
Lj8C306T17 Lonicera japonica
LjContig00222g0016564 Lotus japonicus
Lsat_1_v5_gn_5_112881 Lactuca sativa
Manes.04G075172 Manihot esculenta
Manes.11G084700 Manihot esculenta
Mapoly0023s0090 Marchantia polymorpha
MCO01G601 Micromonas commoda
MD10G1070200 Malus domestica
Medtr4g067250 Medicago truncatula
Medtr8g091830 Medicago truncatula
Medtr8g091840 Medicago truncatula
Medtr8g091850 Medicago truncatula
MELO3C000818.2 Cucumis melo
MELO3C005063.2 Cucumis melo
MELO3C033933.2 Cucumis melo
Migut.F00900 Erythranthe guttata
MSTRG.9105 Avicennia marina
Nitab4.5_0004903g0060 Nicotiana tabacum
Nitab4.5_0006794g0060 Nicotiana tabacum
Nitab4.5_0010401g0020 Nicotiana tabacum
Nn4g24182 Nelumbo nucifera
Oeu005537.3 Olea europaea
Peaxi162Scf00048g01417 Petunia axillaris
PGR042G2822 Punica granatum
PGSC0003DMG402017733 Solanum tuberosum
Phvul.002G039700 Phaseolus vulgaris
Potri.010G019600 Populus trichocarpa
Pp3c18_8710 Physcomitrium patens
Pp3c21_11880 Physcomitrium patens
Prupe.8G091800 Prunus persica
Psat7g051160 Pisum sativum
Psat7g051640 Pisum sativum
PSO063G1830 Papaver somniferum
PSO339G5323 Papaver somniferum
PSO541G1503 Papaver somniferum
PSO541G6540 Papaver somniferum
PSO675G5166 Papaver somniferum
QL08p050352 Quercus lobata
QL11p044151 Quercus lobata
RcHm_v2.0_Chr5g0054461 Rosa chinensis
RcHm_v2.0_Chr6g0265811 Rosa chinensis
RcHm_v2.0_Chr6g0265821 Rosa chinensis
Sabra10G0016200 Salix brachista
Sabra10G0016300 Salix brachista
SalBow6G4317 Salvia bowleyana
Sc19g0000570 Simmondsia chinensis
Sed0001527 Sechium edule
Sed0009728 Sechium edule
SEGI_13436 Sequoiadendron giganteum
SEGI_36783 Sequoiadendron giganteum
SGA_v2.0_scaffold62G21539 Striga asiatica
Solyc02g081640.4 Solanum lycopersicum
Sopen02g026250 Solanum pennellii
Sp1g18350 Schrenkiella parvula
Sp3g07810 Schrenkiella parvula
Sp5g17020 Schrenkiella parvula
Sp7g36660 Schrenkiella parvula
TAR376G0790 Trochodendron aralioides
TAR376G1132 Trochodendron aralioides
TAR628G0054 Trochodendron aralioides
THA.LOC104800691 Tarenaya hassleriana
Thecc.07G171200 Theobroma cacao
Thecc.07G171300 Theobroma cacao
Thecc.08G060300 Theobroma cacao
Thhalv10000433m.g Eutrema salsugineum
Thhalv10024751m.g Eutrema salsugineum
TPR.G20410 Trifolium pratense
TPR.G2191 Trifolium pratense
TPR.G22277 Trifolium pratense
TPR.G2246 Trifolium pratense
TPR.G25255 Trifolium pratense
TPR.G39627 Trifolium pratense
TWI79G1707 Tripterygium wilfordii
unitig_46.g18632 Utricularia gibba
vmacro15435 Vaccinium macrocarpon
VMungo1215G1752 Vigna mungo

User provided reference genes

Program Settings