Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A10p31150 Brassica napus
Aa31LG11G5690 Aethionema arabicum
Aa31LG3G3660 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.2065 Anthoceros agrestis
Actinidia12270 Actinidia chinensis
Actinidia31420 Actinidia chinensis
AL3G22200 Arabidopsis lyrata
AL532U10020 Arabidopsis lyrata
AL6G14700 Arabidopsis lyrata
Aqoxy2G00024 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.3J71J7 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.J916II Arachis hypogaea
AT3G10730 Arabidopsis thaliana
AT5G04990 Arabidopsis thaliana
ATR0307G049 Amborella trichopoda
Atru.chr12.1119 Acer truncatum
Atru.chr12.1692 Acer truncatum
AUR62034111 Chenopodium quinoa
AUR62041279 Chenopodium quinoa
BcaB01g00036 Brassica carinata
BcaB05g21740 Brassica carinata
BcaC06g32213 Brassica carinata
BcaC06g32214 Brassica carinata
BcaC07g36872 Brassica carinata
BolC1t05361H Brassica oleracea
BolC5t34394H Brassica oleracea
BolC9t59927H Brassica oleracea
BraA05t22639Z Brassica rapa
BraA10t45159Z Brassica rapa
C08p01570 Brassica napus
C09p71760 Brassica napus
CAN.G134.41 Capsicum annuum
CANSAT56G0630 Cannabis sativa
CANSAT78G0409 Cannabis sativa
CANSAT78G1307 Cannabis sativa
CARHR085310 Cardamine hirsuta
CARHR208270 Cardamine hirsuta
Carub.0003s0996 Capsella rubella
Carub.0006s0393 Capsella rubella
Ca_24114_v3 Cicer arietinum L.
CDE08G0077 Ceratophyllum demersum
CDE09G1399 Ceratophyllum demersum
Cfa010430 Carpinus fangiana
Cfa014361 Carpinus fangiana
Cfa015121 Carpinus fangiana
Cfa025524 Carpinus fangiana
Ciclev10001582m.g Citrus clementina
Ciclev10003487m.g Citrus clementina
CiPaw.13G048500 Carya illinoinensis
CiPaw.14G038200 Carya illinoinensis
ClCG08G008580 Citrullus lanatus
COL.COLO4_05028 Corchorus olitorius
Cpa.g.sc33.135 Carica papaya
CsaV3_6G004570 Cucumis sativus L.
CSS0038854 Camellia sinensis var. sinensis
CSS0046027 Camellia sinensis var. sinensis
DCAR_003288 Daucus carota
DCAR_014025 Daucus carota
DCAR_022276 Daucus carota
DCAR_022277 Daucus carota
Dinv20457 Davidia involucrata
Duzib106G0442 Durio zibethinus
Duzib128G0026 Durio zibethinus
Duzib128G0945 Durio zibethinus
ECA236G2275 Erigeron canadensis
ECA240G2259 Erigeron canadensis
EL10Ac4g08805 Beta vulgaris
Eucgr.J00319 Eucalyptus grandis
FAN03G1506 Fragaria x ananassa
FAN06G1525 Fragaria x ananassa
FAN10G1609 Fragaria x ananassa
FAN23G2857 Fragaria x ananassa
FAN28G2589 Fragaria x ananassa
FvH4_1g13360 Fragaria vesca
FvH4_7g04870 Fragaria vesca
Glyma.13G185300 Glycine max
Glyma.15G223100 Glycine max
Gohir.A05G398100 Gossypium hirsutum
Gohir.A06G171900 Gossypium hirsutum
Gohir.D04G017900 Gossypium hirsutum
Gohir.D06G180700 Gossypium hirsutum
Gorai.010G212200 Gossypium raimondii
Gorai.012G020700 Gossypium raimondii
GSVIVG01001935001 Vitis vinifera
GSVIVG01001936001 Vitis vinifera
HanXRQChr03g0073711 Helianthus annuus
HanXRQChr09g0247521 Helianthus annuus
Haze_03384 Corylus avellana
Haze_10688 Corylus avellana
Hma1.2p1_0233F.1_g098040 Hydrangea macrophylla
HPP92_012444 Vanilla planifolia
HPP92_021189 Vanilla planifolia
Hund06832 Selenicereus undatus
Lalb_Chr01g0007591 Lupinus albus
Lalb_Chr03g0032471 Lupinus albus
Lj3g0019804 Lotus japonicus
Lj9C660G5 Lonicera japonica
Lsat_1_v5_gn_1_105000 Lactuca sativa
Lsat_1_v5_gn_1_105040 Lactuca sativa
Lsat_1_v5_gn_1_80580 Lactuca sativa
Lsat_1_v5_gn_4_103680 Lactuca sativa
Lsat_1_v5_gn_7_65181 Lactuca sativa
Manes.05G191000 Manihot esculenta
Mapoly0147s0033 Marchantia polymorpha
MBI19_g24737_MAGBIO Magnolia biondii
MCO09G802 Micromonas commoda
MD02G1266700 Malus domestica
MD07G1053000 Malus domestica
Medtr4g097660 Medicago truncatula
Medtr4g097690 Medicago truncatula
Medtr8g043510 Medicago truncatula
MELO3C019928.2 Cucumis melo
Migut.B01171 Erythranthe guttata
MSTRG.20485 Avicennia marina
Nitab4.5_0002687g0030 Nicotiana tabacum
Nitab4.5_0004903g0010 Nicotiana tabacum
Nn6g33270 Nelumbo nucifera
Oeu013042.2 Olea europaea
Os01g0267600 Oryza sativa ssp. japonica
Os05g0270200 Oryza sativa ssp. japonica
Peaxi162Scf00220g00010 Petunia axillaris
PGR044G1985 Punica granatum
PGR083G2251 Punica granatum
PGSC0003DMG402027528 Solanum tuberosum
Phvul.007G106800 Phaseolus vulgaris
Phvul.011G188500 Phaseolus vulgaris
Potri.008G010900 Populus trichocarpa
Potri.010G247900 Populus trichocarpa
Pp3c11_22530 Physcomitrium patens
Pp3c7_4170 Physcomitrium patens
PRCOL_00004494 Prasinoderma coloniale
Prupe.2G056900 Prunus persica
Psat4g141920 Pisum sativum
PSO017G3614 Papaver somniferum
PSO170G3077 Papaver somniferum
PSO170G6472 Papaver somniferum
PSO675G8349 Papaver somniferum
PSO782G4010 Papaver somniferum
QL04p051647 Quercus lobata
QL93p0223_0017 Quercus lobata
RcHm_v2.0_Chr1g0324281 Rosa chinensis
RcHm_v2.0_Chr1g0330551 Rosa chinensis
RcHm_v2.0_Chr2g0101131 Rosa chinensis
RcHm_v2.0_Chr2g0101681 Rosa chinensis
Rhsim07G0072700 Rhododendron simsii
Sabra08G0006600 Salix brachista
Sabra10G0193400 Salix brachista
Sc09g0004980 Simmondsia chinensis
Sed0006452 Sechium edule
Sed0018433 Sechium edule
SEGI_05544 Sequoiadendron giganteum
SEGI_23640 Sequoiadendron giganteum
SGA_v2.0_scaffold182G39819 Striga asiatica
SGA_v2.0_scaffold195G40842 Striga asiatica
SGA_v2.0_scaffold309G48158 Striga asiatica
SHI21216 Sapria himalayana
SMO104G0002 Selaginella moellendorffii
SMO119G0482 Selaginella moellendorffii
SMO266G0096 Selaginella moellendorffii
SMO356G0438 Selaginella moellendorffii
Solyc01g096780.4 Solanum lycopersicum
Sopen01g040480 Solanum pennellii
Sp3g09060 Schrenkiella parvula
Sp6g37810 Schrenkiella parvula
Sp7g10590 Schrenkiella parvula
TAR633G0465 Trochodendron aralioides
TAR636G0393 Trochodendron aralioides
THA.LOC104823158 Tarenaya hassleriana
Thecc.10G131100 Theobroma cacao
Thhalv10013430m.g Eutrema salsugineum
Thhalv10015457m.g Eutrema salsugineum
Thhalv10020697m.g Eutrema salsugineum
TPR.G25035 Trifolium pratense
TWI32G0890 Tripterygium wilfordii
TWI34G0525 Tripterygium wilfordii
TWI63G1132 Tripterygium wilfordii
unitig_22.g5336 Utricularia gibba
unitig_26.g9749 Utricularia gibba
unitig_749.g13793 Utricularia gibba
vmacro13791 Vaccinium macrocarpon
vmacro23127 Vaccinium macrocarpon
VMungo0647G1094 Vigna mungo
Zm00001eb128110 Zea mays
Zm00001eb233650 Zea mays

User provided reference genes

Program Settings