Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p34270 Brassica napus
A06p42250 Brassica napus
A07p32420 Brassica napus
A07p34300 Brassica napus
A09p25160 Brassica napus
Aa31LG2G6260 Aethionema arabicum
Aa31LG4G12270 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.3642 Anthoceros agrestis
Actinidia01373 Actinidia chinensis
Actinidia08111 Actinidia chinensis
AL2G26460 Arabidopsis lyrata
AL5G14810 Arabidopsis lyrata
Aqoxy3G01356 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.BRM5J8 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.J64WZK Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.N26GU2 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Q1J924 Arachis hypogaea
AT3G26100 Arabidopsis thaliana
ATR0824G030 Amborella trichopoda
Atru.chr11.2195 Acer truncatum
Atru.chr11.2196 Acer truncatum
AUR62005531 Chenopodium quinoa
AUR62024206 Chenopodium quinoa
BcaB03g15120 Brassica carinata
BcaB03g15372 Brassica carinata
BcaB05g24312 Brassica carinata
BcaB07g30238 Brassica carinata
BcaB07g30622 Brassica carinata
BcaC03g17315 Brassica carinata
BcaC04g21403 Brassica carinata
BcaC08g46040 Brassica carinata
BcaC08g46199 Brassica carinata
BcaC08g46246 Brassica carinata
BolC2t11337H Brassica oleracea
BolC6t38938H Brassica oleracea
BolC6t39201H Brassica oleracea
BolC7t44039H Brassica oleracea
BolC9t56068H Brassica oleracea
BraA02t08442Z Brassica rapa
BraA06t27141Z Brassica rapa
BraA07t30865Z Brassica rapa
BraA07t31060Z Brassica rapa
BraA09t38103Z Brassica rapa
C02p52620 Brassica napus
C06p38390 Brassica napus
C06p41850 Brassica napus
C06p42280 Brassica napus
C07p35110 Brassica napus
C09p32220 Brassica napus
CAN.G1650.1 Capsicum annuum
CARHR060360 Cardamine hirsuta
CARHR147100 Cardamine hirsuta
Carub.0005s0398 Capsella rubella
Ca_25123_v3 Cicer arietinum L.
Cc11_g16210 Coffea canephora
CDE04G0925 Ceratophyllum demersum
CDE04G2288 Ceratophyllum demersum
CDE07G2065 Ceratophyllum demersum
Cfa009267 Carpinus fangiana
Ciclev10031198m.g Citrus clementina
CiPaw.05G176100 Carya illinoinensis
ClCG05G026150 Citrullus lanatus
COL.COLO4_15132 Corchorus olitorius
COL.COLO4_23541 Corchorus olitorius
Cpa.g.sc33.92 Carica papaya
CsaV3_5G030710 Cucumis sativus L.
CSS0013508 Camellia sinensis var. sinensis
CSS0025401 Camellia sinensis var. sinensis
DCAR_026491 Daucus carota
Dinv11025 Davidia involucrata
Dinv14760 Davidia involucrata
Duzib248G1487 Durio zibethinus
Duzib251G0873 Durio zibethinus
Duzib268G0144 Durio zibethinus
ECA234G0585 Erigeron canadensis
EL10As2g23194 Beta vulgaris
Eucgr.B03238 Eucalyptus grandis
FAN12G3222 Fragaria x ananassa
FAN17G0699 Fragaria x ananassa
FAN17G0727 Fragaria x ananassa
FAN22G1426 Fragaria x ananassa
FAN22G2110 Fragaria x ananassa
FvH4_4g25091 Fragaria vesca
Glyma.05G172400 Glycine max
Glyma.11G245000 Glycine max
Glyma.18G012000 Glycine max
Gohir.A03G131600 Gossypium hirsutum
Gohir.A05G311800 Gossypium hirsutum
Gohir.D02G155600 Gossypium hirsutum
Gohir.D05G312766 Gossypium hirsutum
Gohir.D05G312832 Gossypium hirsutum
Gorai.005G174500 Gossypium raimondii
Gorai.009G334300 Gossypium raimondii
GSVIVG01000593001 Vitis vinifera
HanXRQChr12g0385841 Helianthus annuus
HanXRQChr17g0569191 Helianthus annuus
Hma1.2p1_0815F.1_g222820 Hydrangea macrophylla
HPP92_006209 Vanilla planifolia
Hund06138 Selenicereus undatus
Hund25416 Selenicereus undatus
Lalb_Chr07g0185561 Lupinus albus
Lalb_Chr08g0230831 Lupinus albus
Lalb_Chr12g0204131 Lupinus albus
Lalb_Chr23g0277761 Lupinus albus
Lj3C1063T14 Lonicera japonica
Lj6A817T57 Lonicera japonica
Lj6g0025031 Lotus japonicus
Lsat_1_v5_gn_4_2641 Lactuca sativa
Manes.12G019000 Manihot esculenta
Manes.13G019400 Manihot esculenta
MD07G1091600 Malus domestica
MD13G1106500 Malus domestica
MD16G1106600 Malus domestica
Medtr3g086300 Medicago truncatula
MELO3C011912.2 Cucumis melo
Migut.E00225 Erythranthe guttata
Nitab4.5_0000041g0150 Nicotiana tabacum
Nitab4.5_0007823g0010 Nicotiana tabacum
Nn3g16617 Nelumbo nucifera
Nn4g22510 Nelumbo nucifera
Nn6g34029 Nelumbo nucifera
Oeu025406.1 Olea europaea
Oeu028577.1 Olea europaea
Oeu038656.2 Olea europaea
Oeu059783.1 Olea europaea
Os02g0597000 Oryza sativa ssp. japonica
Os12g0284000 Oryza sativa ssp. japonica
Peaxi162Scf00128g00643 Petunia axillaris
PGR102G2024 Punica granatum
PGR119G0120 Punica granatum
PGSC0003DMG400006598 Solanum tuberosum
PGSC0003DMG400010739 Solanum tuberosum
Phvul.002G253100 Phaseolus vulgaris
Phvul.002G253200 Phaseolus vulgaris
Potri.012G018600 Populus trichocarpa
Potri.015G009400 Populus trichocarpa
Prupe.1G239800 Prunus persica
Psat5g092960 Pisum sativum
PSO017G5809 Papaver somniferum
PSO478G2199 Papaver somniferum
QL03p055993 Quercus lobata
RcHm_v2.0_Chr4g0432281 Rosa chinensis
Rhsim12G0037900 Rhododendron simsii
Sabra12G0014100 Salix brachista
Sabra15G0007400 Salix brachista
SalBow8G5487 Salvia bowleyana
Sc11g0000810 Simmondsia chinensis
Sed0008937 Sechium edule
Sed0022551 Sechium edule
SEGI_10157 Sequoiadendron giganteum
SEGI_14459 Sequoiadendron giganteum
SEGI_25602 Sequoiadendron giganteum
SEGI_25765 Sequoiadendron giganteum
SEGI_27889 Sequoiadendron giganteum
SEGI_30816 Sequoiadendron giganteum
SEGI_38677 Sequoiadendron giganteum
SEGI_39482 Sequoiadendron giganteum
SGA_v2.0_scaffold391G50638 Striga asiatica
SGA_v2.0_scaffold87G27109 Striga asiatica
SHI17871 Sapria himalayana
SMO337G0064 Selaginella moellendorffii
Solyc05g014030.3 Solanum lycopersicum
Sopen05g008980 Solanum pennellii
Sp2g15300 Schrenkiella parvula
TAR371G0843 Trochodendron aralioides
TAR629G2458 Trochodendron aralioides
TAR629G2782 Trochodendron aralioides
THA.LOC104805262 Tarenaya hassleriana
THA.LOC104825541 Tarenaya hassleriana
Thecc.02G268200 Theobroma cacao
Thhalv10003973m.g Eutrema salsugineum
Thhalv10018382m.g Eutrema salsugineum
TPR.G10088 Trifolium pratense
TPR.G20619 Trifolium pratense
TPR.G36196 Trifolium pratense
TWI18G1196 Tripterygium wilfordii
TWI36G0960 Tripterygium wilfordii
TWI75G1115 Tripterygium wilfordii
unitig_21.g20399 Utricularia gibba
vmacro01108 Vaccinium macrocarpon
VMungo0251G0097 Vigna mungo
VMungo0251G1793 Vigna mungo
VMungo1383G0572 Vigna mungo
Zm00001eb183880 Zea mays

User provided reference genes

Program Settings