Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p19320 Brassica napus
A04p26590 Brassica napus
A05p10840 Brassica napus
Aa31LG10G6480 Aethionema arabicum
Actinidia29264 Actinidia chinensis
Actinidia33692 Actinidia chinensis
Ah.12g054160 Amaranthus hybridus
AL1G44730 Arabidopsis lyrata
AL4G30800 Arabidopsis lyrata
Aqoxy2G02922 Aquilegia oxysepala
Aqoxy7G03787 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.CF90NA Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.DXD2XK Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.F6GRBT Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.GU0FP7 Arachis hypogaea
AT1G30670 Arabidopsis thaliana
AT2G34820 Arabidopsis thaliana
ATR0568G033 Amborella trichopoda
ATR0680G317 Amborella trichopoda
Atru.chr1.1007 Acer truncatum
Atru.chr1.975 Acer truncatum
BcaB02g09505 Brassica carinata
BcaC01g05752 Brassica carinata
BcaC02g07757 Brassica carinata
BcaC02g11563 Brassica carinata
BcaC02g11564 Brassica carinata
BolC3t14654H Brassica oleracea
BolC4t22983H Brassica oleracea
BolC4t27875H Brassica oleracea
BraA03t11188Z Brassica rapa
BraA04t18164Z Brassica rapa
BraA05t20029Z Brassica rapa
C03p22570 Brassica napus
C04p13940 Brassica napus
C04p64010 Brassica napus
CAN.G22.31 Capsicum annuum
CANSAT35G0546 Cannabis sativa
CANSAT64G1385 Cannabis sativa
CARHR030140 Cardamine hirsuta
CARHR128980 Cardamine hirsuta
Carub.0001s2893 Capsella rubella
Carub.0004s1650 Capsella rubella
Ca_03590_v3 Cicer arietinum L.
Ca_03592_v3 Cicer arietinum L.
Cc02_g35090 Coffea canephora
CDE03G0187 Ceratophyllum demersum
CDE03G0447 Ceratophyllum demersum
CDE06G0170 Ceratophyllum demersum
CDE07G1862 Ceratophyllum demersum
Cfa000774 Carpinus fangiana
Cfa022977 Carpinus fangiana
Ciclev10017579m.g Citrus clementina
CiPaw.09G146600 Carya illinoinensis
CiPaw.09G146700 Carya illinoinensis
CiPaw.09G147300 Carya illinoinensis
ClCG03G008540 Citrullus lanatus
COL.COLO4_22896 Corchorus olitorius
COL.COLO4_32257 Corchorus olitorius
Cpa.g.sc489.4 Carica papaya
Cpa.g.sc489.5 Carica papaya
Cpa.g.sc489.6 Carica papaya
CsaV3_1G037610 Cucumis sativus L.
CSS0008304 Camellia sinensis var. sinensis
CSS0011269 Camellia sinensis var. sinensis
DCAR_003829 Daucus carota
DCAR_007817 Daucus carota
Dinv19591 Davidia involucrata
Duzib187G1153 Durio zibethinus
Duzib213G0851 Durio zibethinus
ECA234G0609 Erigeron canadensis
ECA247G3319 Erigeron canadensis
EL10Ac5g12386 Beta vulgaris
Eucgr.D01630 Eucalyptus grandis
FAN11G2175 Fragaria x ananassa
FAN16G0318 Fragaria x ananassa
FAN16G1905 Fragaria x ananassa
FAN21G0763 Fragaria x ananassa
FAN21G1749 Fragaria x ananassa
FAN25G0834 Fragaria x ananassa
FAN25G3016 Fragaria x ananassa
FvH4_3g11190 Fragaria vesca
FvH4_3g14980 Fragaria vesca
Glyma.08G167000 Glycine max
Glyma.15G260500 Glycine max
Gohir.A01G097300 Gossypium hirsutum
Gohir.A01G210840 Gossypium hirsutum
Gohir.A03G172700 Gossypium hirsutum
Gohir.D01G081900 Gossypium hirsutum
Gohir.D02G195900 Gossypium hirsutum
Gorai.002G107000 Gossypium raimondii
Gorai.005G218900 Gossypium raimondii
GSVIVG01037927001 Vitis vinifera
HanXRQChr02g0033271 Helianthus annuus
Haze_05937 Corylus avellana
Haze_07817 Corylus avellana
Hma1.2p1_0078F.1_g040960 Hydrangea macrophylla
Hma1.2p1_1671F.1_g296680 Hydrangea macrophylla
HPP92_007297 Vanilla planifolia
Lalb_Chr03g0031841 Lupinus albus
Lj3g0011993 Lotus japonicus
Lj3g0017864 Lotus japonicus
Lsat_1_v5_gn_1_33361 Lactuca sativa
Lsat_1_v5_gn_1_33401 Lactuca sativa
Manes.06G052000 Manihot esculenta
Manes.14G125900 Manihot esculenta
MBI18_g40230_MAGBIO Magnolia biondii
MBI18_g40231_MAGBIO Magnolia biondii
MBI18_g42709_MAGBIO Magnolia biondii
MBI18_g46680_MAGBIO Magnolia biondii
MBI18_g46681_MAGBIO Magnolia biondii
MD05G1228100 Malus domestica
MD05G1228800 Malus domestica
MD05G1265500 Malus domestica
MD10G1243500 Malus domestica
Medtr1g060700 Medicago truncatula
Medtr2g067000 Medicago truncatula
MELO3C002870.2 Cucumis melo
Migut.H01308 Erythranthe guttata
Migut.M01923 Erythranthe guttata
Nitab4.5_0000623g0010 Nicotiana tabacum
Nitab4.5_0008763g0020 Nicotiana tabacum
Nitab4.5_0009906g0010 Nicotiana tabacum
Nn2g11408 Nelumbo nucifera
Nn2g11410 Nelumbo nucifera
Nn2g13642 Nelumbo nucifera
Oeu000508.1 Olea europaea
Oeu052711.1 Olea europaea
Oeu052712.1 Olea europaea
Peaxi162Scf00876g00220 Petunia axillaris
PGR004G2748 Punica granatum
PGR038G0002 Punica granatum
PGR083G1880 Punica granatum
PGSC0003DMG400020812 Solanum tuberosum
PGSC0003DMG400044874 Solanum tuberosum
Phvul.001G006100 Phaseolus vulgaris
Phvul.001G006200 Phaseolus vulgaris
Potri.001G461000 Populus trichocarpa
Potri.011G157700 Populus trichocarpa
Prupe.4G100400 Prunus persica
Prupe.4G134200 Prunus persica
PSO357G0398 Papaver somniferum
PSO541G1280 Papaver somniferum
PSO541G2074 Papaver somniferum
PSO675G2780 Papaver somniferum
PSO675G3350 Papaver somniferum
QL04p088510 Quercus lobata
QL04p088957 Quercus lobata
QL05p064513 Quercus lobata
RcHm_v2.0_Chr5g0018101 Rosa chinensis
RcHm_v2.0_Chr5g0024601 Rosa chinensis
Rhsim06G0137400 Rhododendron simsii
Rhsim13G0124800 Rhododendron simsii
Sabra11G0142400 Salix brachista
Sabra16G0312500 Salix brachista
SalBow3G3793 Salvia bowleyana
SalBow3G4351 Salvia bowleyana
Sc01g0008400 Simmondsia chinensis
Sed0014082 Sechium edule
SGA_v2.0_scaffold1G00292 Striga asiatica
SGA_v2.0_scaffold51G18664 Striga asiatica
SHI24799 Sapria himalayana
Solyc08g075110.3 Solanum lycopersicum
Sopen08g023740 Solanum pennellii
Sp1g26570 Schrenkiella parvula
Sp4g17100 Schrenkiella parvula
TAR626G1440 Trochodendron aralioides
TAR629G0335 Trochodendron aralioides
THA.LOC104798622 Tarenaya hassleriana
THA.LOC104814696 Tarenaya hassleriana
Thecc.06G011000 Theobroma cacao
Thecc.07G180300 Theobroma cacao
Thhalv10009765m.g Eutrema salsugineum
Thhalv10017751m.g Eutrema salsugineum
TPR.G26563 Trifolium pratense
TPR.G33819 Trifolium pratense
TWI32G1238 Tripterygium wilfordii
TWI34G1793 Tripterygium wilfordii
unitig_32.g10876 Utricularia gibba
unitig_748.g8277 Utricularia gibba
vmacro21872 Vaccinium macrocarpon
VMungo0331G1116 Vigna mungo
VMungo0331G1280 Vigna mungo
VMungo0647G2067 Vigna mungo
Zm00001eb002350 Zea mays

User provided reference genes

Program Settings