Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p33720 Brassica napus
A03p42050 Brassica napus
A05p19510 Brassica napus
A05p27580 Brassica napus
Aa31LG10G3210 Aethionema arabicum
Aa31LG8G7840 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.2381 Anthoceros agrestis
Actinidia31131 Actinidia chinensis
Ah.08g217760 Amaranthus hybridus
Ah.15g094360 Amaranthus hybridus
AL1G59450 Arabidopsis lyrata
AL3G35080 Arabidopsis lyrata
Aqoxy7G02835 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.7JFF3X Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.C9Z78F Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.T57K28 Arachis hypogaea
AT1G51560 Arabidopsis thaliana
AT3G21140 Arabidopsis thaliana
ATR0626G101 Amborella trichopoda
Atru.chr1.2721 Acer truncatum
AUR62001353 Chenopodium quinoa
AUR62025651 Chenopodium quinoa
BcaB02g11256 Brassica carinata
BcaB04g19144 Brassica carinata
BcaB04g20502 Brassica carinata
BcaB04g20609 Brassica carinata
BcaB06g26184 Brassica carinata
BcaC01g03525 Brassica carinata
BcaC05g28253 Brassica carinata
BcaC08g43921 Brassica carinata
BcaC08g44499 Brassica carinata
BcaC09g49052 Brassica carinata
BcaNung05301 Brassica carinata
BolC1t04257H Brassica oleracea
BolC3t17432H Brassica oleracea
BolC5t32990H Brassica oleracea
BolC6t36470H Brassica oleracea
BraA01t03485Z Brassica rapa
BraA02t08409Z Brassica rapa
BraA03t13359Z Brassica rapa
BraA05t20855Z Brassica rapa
BraA05t21647Z Brassica rapa
C01p43100 Brassica napus
C03p51470 Brassica napus
C05p42680 Brassica napus
C06p13140 Brassica napus
C06p19510 Brassica napus
CAN.G308.12 Capsicum annuum
CANSAT01G0693 Cannabis sativa
CARHR041710 Cardamine hirsuta
CARHR097000 Cardamine hirsuta
CARHR113330 Cardamine hirsuta
CARHR216830 Cardamine hirsuta
Carub.0001s4041 Capsella rubella
Carub.0003s2104 Capsella rubella
Carub.0043s0002 Capsella rubella
Ca_20505_v3 Cicer arietinum L.
CBR_g66806 Chara braunii
Cc04_g00280 Coffea canephora
CDE05G0113 Ceratophyllum demersum
CDE05G0121 Ceratophyllum demersum
Cfa002143 Carpinus fangiana
Ciclev10025825m.g Citrus clementina
CiPaw.01G089700 Carya illinoinensis
ClCG09G001660 Citrullus lanatus
COL.COLO4_31180 Corchorus olitorius
Cpa.g.sc461.2 Carica papaya
Cre12.g520200 Chlamydomonas reinhardtii
CsaV3_7G033680 Cucumis sativus L.
CSS0017795 Camellia sinensis var. sinensis
DCAR_022617 Daucus carota
Dinv20345 Davidia involucrata
Dinv37787 Davidia involucrata
Duzib192G0075 Durio zibethinus
Duzib235G1293 Durio zibethinus
ECA234G1217 Erigeron canadensis
EL10Ac7g18173 Beta vulgaris
Eucgr.F04024 Eucalyptus grandis
FAN02G2868 Fragaria x ananassa
FAN05G3538 Fragaria x ananassa
FAN09G0689 Fragaria x ananassa
FAN14G5835 Fragaria x ananassa
FvH4_6g37120 Fragaria vesca
Glyma.07G020600 Glycine max
Glyma.08G221400 Glycine max
Gohir.A02G090300 Gossypium hirsutum
Gohir.A05G114300 Gossypium hirsutum
Gohir.A12G059700 Gossypium hirsutum
Gohir.D02G107500 Gossypium hirsutum
Gohir.D05G114600 Gossypium hirsutum
Gorai.005G122100 Gossypium raimondii
Gorai.009G118800 Gossypium raimondii
GSVIVG01029573001 Vitis vinifera
HanXRQChr02g0032091 Helianthus annuus
HanXRQChr10g0311171 Helianthus annuus
Haze_16281 Corylus avellana
Haze_16282 Corylus avellana
Hma1.2p1_0517F.1_g170700 Hydrangea macrophylla
Hma1.2p1_1111F.1_g258350 Hydrangea macrophylla
HPP92_010289 Vanilla planifolia
HPP92_015382 Vanilla planifolia
HPP92_028043 Vanilla planifolia
HPP92_028311 Vanilla planifolia
HPP92_028546 Vanilla planifolia
Hund05680 Selenicereus undatus
Hund18606 Selenicereus undatus
Lalb_Chr01g0011841 Lupinus albus
Lj3g0007083 Lotus japonicus
Lj5A23G26 Lonicera japonica
Lj5A24T51 Lonicera japonica
Lj9A542G26 Lonicera japonica
Lsat_1_v5_gn_1_39481 Lactuca sativa
Lsat_1_v5_gn_5_137321 Lactuca sativa
Lsat_1_v5_gn_8_80840 Lactuca sativa
Manes.16G046301 Manihot esculenta
Mapoly0153s0003 Marchantia polymorpha
MBI16_g05829_MAGBIO Magnolia biondii
MBI16_g10347_MAGBIO Magnolia biondii
MBI16_g47871_MAGBIO Magnolia biondii
MCO09G402 Micromonas commoda
MCO13G417 Micromonas commoda
MD09G1161400 Malus domestica
MD17G1147200 Malus domestica
Medtr4g007990 Medicago truncatula
MELO3C024281.2 Cucumis melo
Migut.I01187 Erythranthe guttata
MSTRG.22505 Avicennia marina
Nitab4.5_0001691g0190 Nicotiana tabacum
Nitab4.5_0002354g0040 Nicotiana tabacum
Nitab4.5_0003757g0080 Nicotiana tabacum
Nitab4.5_0006975g0010 Nicotiana tabacum
Nn8g40740 Nelumbo nucifera
Oeu001813.1 Olea europaea
Oeu049642.2 Olea europaea
Oeu050745.3 Olea europaea
Os02g0148400 Oryza sativa ssp. japonica
Os08g0517500 Oryza sativa ssp. japonica
Peaxi162Scf00038g02535 Petunia axillaris
Peaxi162Scf00207g01628 Petunia axillaris
PGR102G1715 Punica granatum
PGSC0003DMG401026514 Solanum tuberosum
PGSC0003DMG402026514 Solanum tuberosum
Phvul.008G254200 Phaseolus vulgaris
Potri.008G006400 Populus trichocarpa
Potri.010G252300 Populus trichocarpa
Pp3c18_21250 Physcomitrium patens
Pp3c19_5780 Physcomitrium patens
PRCOL_00002787 Prasinoderma coloniale
Prupe.3G020500 Prunus persica
Psat7g260640 Pisum sativum
PSO063G0738 Papaver somniferum
PSO170G0363 Papaver somniferum
QL05p083882 Quercus lobata
RcHm_v2.0_Chr2g0149681 Rosa chinensis
Rhsim08G0249300 Rhododendron simsii
Sabra08G0003400 Salix brachista
Sabra10G0196300 Salix brachista
Sc12g0011120 Simmondsia chinensis
Sed0015920 Sechium edule
SEGI_04052 Sequoiadendron giganteum
SEGI_14249 Sequoiadendron giganteum
SEGI_29649 Sequoiadendron giganteum
SGA_v2.0_scaffold122G33277 Striga asiatica
SGA_v2.0_scaffold71G23998 Striga asiatica
SMO364G0508 Selaginella moellendorffii
Solyc06g063290.3 Solanum lycopersicum
Sopen06g022750 Solanum pennellii
Sp1g38210 Schrenkiella parvula
Sp3g19100 Schrenkiella parvula
TAR625G0125 Trochodendron aralioides
THA.LOC104798773 Tarenaya hassleriana
THA.LOC104817922 Tarenaya hassleriana
Thecc.06G059900 Theobroma cacao
Thhalv10011555m.g Eutrema salsugineum
Thhalv10020874m.g Eutrema salsugineum
TPR.G24561 Trifolium pratense
TPR.G3353 Trifolium pratense
TWI12G0642 Tripterygium wilfordii
TWI18G0412 Tripterygium wilfordii
unitig_32.g11007 Utricularia gibba
vmacro18751 Vaccinium macrocarpon
VMungo0647G1366 Vigna mungo
Zm00001eb035800 Zea mays
Zm00001eb232310 Zea mays

User provided reference genes

Program Settings