Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p28820 Brassica napus
A05p08310 Brassica napus
A10p33380 Brassica napus
Aa31LG5G23160 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.3727 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.4128 Anthoceros agrestis
Actinidia05319 Actinidia chinensis
Actinidia11261 Actinidia chinensis
Actinidia13152 Actinidia chinensis
Actinidia26475 Actinidia chinensis
AL4G34250 Arabidopsis lyrata
AL6G11480 Arabidopsis lyrata
AL6G11490 Arabidopsis lyrata
Aqoxy2G02240 Aquilegia oxysepala
Aqoxy3G01130 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.CCZS04 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.D1PGNE Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.E6NKCB Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.L41CIL Arachis hypogaea
AT2G37660 Arabidopsis thaliana
AT5G02240 Arabidopsis thaliana
ATR0559G007 Amborella trichopoda
Atru.chr8.1989 Acer truncatum
AUR62041348 Chenopodium quinoa
AUR62041751 Chenopodium quinoa
BcaB02g09264 Brassica carinata
BcaB02g09265 Brassica carinata
BcaB06g29015 Brassica carinata
BcaB06g29016 Brassica carinata
BcaC02g07503 Brassica carinata
BcaC02g11887 Brassica carinata
BcaC02g11888 Brassica carinata
BolC4t22626H Brassica oleracea
BolC4t28114H Brassica oleracea
BolC9t60162H Brassica oleracea
BraA04t18359Z Brassica rapa
BraA05t19796Z Brassica rapa
BraA10t45369Z Brassica rapa
C04p10280 Brassica napus
C04p66100 Brassica napus
C09p74290 Brassica napus
CAN.G1685.1 Capsicum annuum
CANSAT54G2707 Cannabis sativa
CARHR131920 Cardamine hirsuta
CARHR211130 Cardamine hirsuta
Carub.0004s1959 Capsella rubella
Carub.0006s0108 Capsella rubella
Ca_07559_v3 Cicer arietinum L.
Ca_27652_v3 Cicer arietinum L.
CBR_g8964 Chara braunii
Cc06_g02520 Coffea canephora
CDE04G1817 Ceratophyllum demersum
Cfa017360 Carpinus fangiana
Ciclev10012166m.g Citrus clementina
CiPaw.09G194500 Carya illinoinensis
CiPaw.10G146400 Carya illinoinensis
ClCG04G008110 Citrullus lanatus
COL.COLO4_14783 Corchorus olitorius
Cpa.g.sc169.22 Carica papaya
Cre06.g279850 Chlamydomonas reinhardtii
CsaV3_4G025080 Cucumis sativus L.
CSS0030439 Camellia sinensis var. sinensis
CSS0040011 Camellia sinensis var. sinensis
DCAR_012103 Daucus carota
DCAR_024060 Daucus carota
Dinv35586 Davidia involucrata
Dinv37162 Davidia involucrata
Duzib093G1851 Durio zibethinus
Duzib128G1894 Durio zibethinus
ECA248G3650 Erigeron canadensis
EL10As1g23062 Beta vulgaris
Eucgr.A01273 Eucalyptus grandis
FAN02G4300 Fragaria x ananassa
FAN05G3435 Fragaria x ananassa
FAN09G4346 Fragaria x ananassa
FAN14G3205 Fragaria x ananassa
FAN14G3787 Fragaria x ananassa
FvH4_5g28981 Fragaria vesca
FvH4_6g13500 Fragaria vesca
Glyma.07G133200 Glycine max
Glyma.18G182600 Glycine max
Gohir.A09G155032 Gossypium hirsutum
Gohir.D09G150600 Gossypium hirsutum
Gorai.006G171900 Gossypium raimondii
GSVIVG01034152001 Vitis vinifera
HanXRQChr01g0003071 Helianthus annuus
Haze_20813 Corylus avellana
Hma1.2p1_0936F.1_g238830 Hydrangea macrophylla
Hma1.2p1_1889F.1_g306630 Hydrangea macrophylla
HPP92_018136 Vanilla planifolia
Hund10632 Selenicereus undatus
Lalb_Chr03g0042331 Lupinus albus
Lalb_Chr12g0209561 Lupinus albus
Lj1g0003421 Lotus japonicus
Lj2A93T84 Lonicera japonica
Lj3A966G51 Lonicera japonica
Lj3g0005938 Lotus japonicus
Lsat_1_v5_gn_2_53581 Lactuca sativa
Lsat_1_v5_gn_5_149640 Lactuca sativa
Manes.08G088900 Manihot esculenta
Manes.09G092700 Manihot esculenta
Mapoly0110s0021 Marchantia polymorpha
Mapoly0187s0017 Marchantia polymorpha
MBI14_g12122_MAGBIO Magnolia biondii
MCO14G206 Micromonas commoda
MD04G1130500 Malus domestica
MD12G1143700 Malus domestica
Medtr4g021815 Medicago truncatula
Medtr7g062140 Medicago truncatula
MELO3C003137.2 Cucumis melo
Migut.J00321 Erythranthe guttata
MSTRG.5656 Avicennia marina
MSTRG.5810 Avicennia marina
Nitab4.5_0000705g0180 Nicotiana tabacum
Nitab4.5_0004639g0020 Nicotiana tabacum
Nn2g13382 Nelumbo nucifera
Nn3g16293 Nelumbo nucifera
Oeu010095.1 Olea europaea
Oeu036136.3 Olea europaea
Os03g0822200 Oryza sativa ssp. japonica
Os05g0110300 Oryza sativa ssp. japonica
Peaxi162Scf00165g00819 Petunia axillaris
PGR004G0886 Punica granatum
PGR031G0852 Punica granatum
PGSC0003DMG400008830 Solanum tuberosum
Phvul.008G119600 Phaseolus vulgaris
Phvul.010G011300 Phaseolus vulgaris
Potri.006G086800 Populus trichocarpa
Pp3c14_3760 Physcomitrium patens
Pp3c15_16990 Physcomitrium patens
Pp3c16_5470 Physcomitrium patens
Pp3c9_11060 Physcomitrium patens
PRCOL_00002855 Prasinoderma coloniale
PRCOL_00003288 Prasinoderma coloniale
Prupe.6G257200 Prunus persica
Psat3g138600 Pisum sativum
Psat7g235680 Pisum sativum
PSO063G2117 Papaver somniferum
PSO063G2886 Papaver somniferum
PSO339G0047 Papaver somniferum
PSO339G5717 Papaver somniferum
PSO339G5845 Papaver somniferum
PSO513G0074 Papaver somniferum
PSO541G1902 Papaver somniferum
PSO541G3402 Papaver somniferum
QL07p048679 Quercus lobata
QL11p019359 Quercus lobata
QL11p019363 Quercus lobata
RcHm_v2.0_Chr3g0466371 Rosa chinensis
Rhsim05G0193900 Rhododendron simsii
Sabra06G0066200 Salix brachista
SalBow4G0960 Salvia bowleyana
Sc20g0005000 Simmondsia chinensis
Sed0018240 Sechium edule
SEGI_20216 Sequoiadendron giganteum
SMO118G0186 Selaginella moellendorffii
SMO141G0146 Selaginella moellendorffii
SMO141G0274 Selaginella moellendorffii
Solyc09g010930.4 Solanum lycopersicum
Sopen09g005650 Solanum pennellii
Sp4g20020 Schrenkiella parvula
Sp6g40210 Schrenkiella parvula
TAR623G1158 Trochodendron aralioides
TAR636G1862 Trochodendron aralioides
THA.LOC104816264 Tarenaya hassleriana
THA.LOC104823415 Tarenaya hassleriana
Thecc.05G037600 Theobroma cacao
Thhalv10014474m.g Eutrema salsugineum
Thhalv10016917m.g Eutrema salsugineum
TPR.G1677 Trifolium pratense
TPR.G5554 Trifolium pratense
TWI74G0344 Tripterygium wilfordii
TWI77G0750 Tripterygium wilfordii
unitig_8.g4054 Utricularia gibba
vmacro08647 Vaccinium macrocarpon
vmacro20165 Vaccinium macrocarpon
VMungo0331G0374 Vigna mungo
VMungo0331G0484 Vigna mungo
VMungo0331G1569 Vigna mungo
VMungo1383G0388 Vigna mungo
VMungo1383G3507 Vigna mungo
Zm00001eb062770 Zea mays
Zm00001eb266940 Zea mays
Zm00001eb355850 Zea mays

User provided reference genes

Program Settings