Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p09450 Brassica napus
A09p34940 Brassica napus
Aa31LG2G14580 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.2665 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_117.520 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.1422 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.3719 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.3825 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.1618 Anthoceros agrestis
Actinidia04416 Actinidia chinensis
Actinidia07489 Actinidia chinensis
Ah.09g224990 Amaranthus hybridus
AL1G49740 Arabidopsis lyrata
AL4G31720 Arabidopsis lyrata
Aqoxy1G01452 Aquilegia oxysepala
Aqoxy3G04173 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.2EGS27 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.NE0D4P Arachis hypogaea
AT1G31310 Arabidopsis thaliana
AT2G35640 Arabidopsis thaliana
ATR0807G251 Amborella trichopoda
Atru.chr10.581 Acer truncatum
Atru.chr11.1077 Acer truncatum
Atru.chr5.1971 Acer truncatum
BcaB03g13801 Brassica carinata
BcaB07g32792 Brassica carinata
BcaC05g27162 Brassica carinata
BolC5t31788H Brassica oleracea
BolC7t41954H Brassica oleracea
BraA07t28741Z Brassica rapa
BraA09t39023Z Brassica rapa
C05p30530 Brassica napus
C07p14550 Brassica napus
CAN.G675.10 Capsicum annuum
CANSAT35G0306 Cannabis sativa
CARHR030770 Cardamine hirsuta
CARHR129870 Cardamine hirsuta
CARHR129880 Cardamine hirsuta
Carub.0001s2974 Capsella rubella
Carub.0004s1736 Capsella rubella
Ca_10529_v3 Cicer arietinum L.
Cc09_g06700 Coffea canephora
CDE02G3273 Ceratophyllum demersum
CDE05G0141 Ceratophyllum demersum
CDE05G0328 Ceratophyllum demersum
CDE05G2667 Ceratophyllum demersum
Cfa000740 Carpinus fangiana
Ciclev10017689m.g Citrus clementina
CiPaw.09G151500 Carya illinoinensis
ClCG11G000920 Citrullus lanatus
COL.COLO4_30941 Corchorus olitorius
Cpa.g.sc192.2 Carica papaya
Cpa.g.sc2.95 Carica papaya
CsaV3_5G012890 Cucumis sativus L.
DCAR_002633 Daucus carota
DCAR_003800 Daucus carota
Dinv08660 Davidia involucrata
Dinv13417 Davidia involucrata
Duzib160G0754 Durio zibethinus
Duzib192G0627 Durio zibethinus
Duzib248G0352 Durio zibethinus
Duzib251G0910 Durio zibethinus
ECA246G0991 Erigeron canadensis
EL10Ac8g19539 Beta vulgaris
Eucgr.D01036 Eucalyptus grandis
FAN16G2817 Fragaria x ananassa
FAN21G2504 Fragaria x ananassa
FAN25G3523 Fragaria x ananassa
FvH4_3g11900 Fragaria vesca
Glyma.10G205966 Glycine max
Glyma.20G184500 Glycine max
Gohir.A01G143700 Gossypium hirsutum
Gohir.A05G143800 Gossypium hirsutum
Gohir.A06G140400 Gossypium hirsutum
Gohir.A10G046100 Gossypium hirsutum
Gohir.D01G137000 Gossypium hirsutum
Gohir.D05G146100 Gossypium hirsutum
Gohir.D06G147100 Gossypium hirsutum
Gohir.D10G047300 Gossypium hirsutum
Gorai.002G169000 Gossypium raimondii
Gorai.009G150000 Gossypium raimondii
Gorai.010G171500 Gossypium raimondii
Gorai.011G050400 Gossypium raimondii
GSVIVG01026222001 Vitis vinifera
HanXRQChr12g0380231 Helianthus annuus
Haze_06001 Corylus avellana
HPP92_025846 Vanilla planifolia
Lalb_Chr02g0151901 Lupinus albus
Lalb_Chr02g0151911 Lupinus albus
Lalb_Chr06g0170301 Lupinus albus
Lj5g0020243 Lotus japonicus
Lj6A725G109 Lonicera japonica
Lsat_1_v5_gn_5_36560 Lactuca sativa
Manes.15G141750 Manihot esculenta
Manes.16G053700 Manihot esculenta
Manes.17G092600 Manihot esculenta
Mapoly0002s0172 Marchantia polymorpha
Mapoly0002s0204 Marchantia polymorpha
Mapoly0003s0164 Marchantia polymorpha
Mapoly0037s0146 Marchantia polymorpha
Mapoly0065s0047 Marchantia polymorpha
Mapoly0086s0081 Marchantia polymorpha
Mapoly0113s0052 Marchantia polymorpha
Mapoly0113s0053 Marchantia polymorpha
Mapoly0130s0023 Marchantia polymorpha
MBI08_g22598_MAGBIO Magnolia biondii
MD05G1256800 Malus domestica
MD10G1237300 Malus domestica
Medtr1g094045 Medicago truncatula
MELO3C020079.2 Cucumis melo
Migut.M01958 Erythranthe guttata
MSTRG.7579 Avicennia marina
Nitab4.5_0001312g0050 Nicotiana tabacum
Nitab4.5_0003444g0010 Nicotiana tabacum
Nitab4.5_0005797g0020 Nicotiana tabacum
Nitab4.5_0011847g0030 Nicotiana tabacum
Nn2g12741 Nelumbo nucifera
Nn4g24804 Nelumbo nucifera
Nn7g38034 Nelumbo nucifera
Oeu000477.1 Olea europaea
Oeu063117.1 Olea europaea
Os03g0666300 Oryza sativa ssp. japonica
Os04g0670900 Oryza sativa ssp. japonica
Peaxi162Scf00956g00016 Petunia axillaris
PGR083G0431 Punica granatum
PGSC0003DMG400012915 Solanum tuberosum
PGSC0003DMG400021146 Solanum tuberosum
Phvul.003G007800 Phaseolus vulgaris
Phvul.007G100500 Phaseolus vulgaris
Potri.012G117500 Populus trichocarpa
Pp3c12_140 Physcomitrium patens
Pp3c15_21740 Physcomitrium patens
Pp3c17_1430 Physcomitrium patens
Pp3c17_6370 Physcomitrium patens
Pp3c19_13320 Physcomitrium patens
Pp3c21_18170 Physcomitrium patens
Pp3c22_15410 Physcomitrium patens
Pp3c24_20450 Physcomitrium patens
Pp3c7_23130 Physcomitrium patens
Pp3c9_20560 Physcomitrium patens
Prupe.4G107000 Prunus persica
Psat6g179280 Pisum sativum
PSO063G1817 Papaver somniferum
PSO782G5101 Papaver somniferum
QL03p041403 Quercus lobata
QL05p062990 Quercus lobata
RcHm_v2.0_Chr5g0019411 Rosa chinensis
Rhsim13G0128100 Rhododendron simsii
Sabra15G0134400 Salix brachista
SalBow6G4785 Salvia bowleyana
SalBow8G5628 Salvia bowleyana
Sc17g0004570 Simmondsia chinensis
Sed0022566 Sechium edule
SEGI_17865 Sequoiadendron giganteum
SEGI_24808 Sequoiadendron giganteum
SEGI_36566 Sequoiadendron giganteum
SGA_v2.0_scaffold298G47656 Striga asiatica
SMO271G0186 Selaginella moellendorffii
SMO367G0451 Selaginella moellendorffii
SMO367G0456 Selaginella moellendorffii
Solyc02g030460.2 Solanum lycopersicum
Solyc02g069390.2 Solanum lycopersicum
Sopen02g009780 Solanum pennellii
Sopen02g018540 Solanum pennellii
Sp1g27130 Schrenkiella parvula
Sp4g17890 Schrenkiella parvula
TAR396G0001 Trochodendron aralioides
TAR696G0002 Trochodendron aralioides
THA.LOC104798544 Tarenaya hassleriana
THA.LOC104814367 Tarenaya hassleriana
Thecc.02G298200 Theobroma cacao
Thecc.06G136700 Theobroma cacao
Thhalv10007862m.g Eutrema salsugineum
Thhalv10016925m.g Eutrema salsugineum
TPR.G9809 Trifolium pratense
TWI09G0504 Tripterygium wilfordii
TWI53G2052 Tripterygium wilfordii
TWI73G0582 Tripterygium wilfordii
unitig_37.g12059 Utricularia gibba
vmacro03493 Vaccinium macrocarpon
VMungo0720G0606 Vigna mungo
VMungo1215G3200 Vigna mungo
Zm00001eb065500 Zea mays
Zm00001eb066770 Zea mays
Zm00001eb217780 Zea mays

User provided reference genes

Program Settings