Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p17900 Brassica napus
Aa31LG5G8890 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.1081 Anthoceros agrestis
Actinidia07451 Actinidia chinensis
Actinidia26424 Actinidia chinensis
Actinidia27747 Actinidia chinensis
Actinidia27748 Actinidia chinensis
Actinidia27749 Actinidia chinensis
Actinidia32696 Actinidia chinensis
Actinidia34068 Actinidia chinensis
AL4G20110 Arabidopsis lyrata
AL552U10010 Arabidopsis lyrata
Aqoxy7G01852 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.6PJW91 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.7C8SEE Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.CMVH84 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.D8BJR2 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.F3YJTF Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.GFGC5E Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.H6EN9A Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.HL09EZ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.JURE59 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.NRTP45 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PKVI3C Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PTA25Z Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QKW76S Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.S8F21X Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.T5A0DZ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.UX9YIA Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XZYA5I Arachis hypogaea
AT2G26890 Arabidopsis thaliana
ATR0561G176 Amborella trichopoda
Atru.chr7.1285 Acer truncatum
Atru.chr7.1286 Acer truncatum
AUR62027382 Chenopodium quinoa
AUR62031297 Chenopodium quinoa
BcaB02g10050 Brassica carinata
BcaC02g10846 Brassica carinata
BolC4t23961H Brassica oleracea
BraA07t29508Z Brassica rapa
C04p24570 Brassica napus
CAN.G368.4 Capsicum annuum
CANSAT56G4488 Cannabis sativa
CARHR119040 Cardamine hirsuta
Carub.0004s0739 Capsella rubella
Ca_02544_v3 Cicer arietinum L.
CBR_g4479 Chara braunii
Cc06_g09260 Coffea canephora
CDE06G0602 Ceratophyllum demersum
CDE06G1063 Ceratophyllum demersum
CDE06G2493 Ceratophyllum demersum
CDE07G0361 Ceratophyllum demersum
CDE07G0366 Ceratophyllum demersum
CDE07G1594 Ceratophyllum demersum
CDE07G1715 Ceratophyllum demersum
Cfa003295 Carpinus fangiana
Ciclev10007224m.g Citrus clementina
CiPaw.03G235900 Carya illinoinensis
ClCG06G010450 Citrullus lanatus
COL.COLO4_34940 Corchorus olitorius
COL.COLO4_34941 Corchorus olitorius
Cpa.g.sc23.151 Carica papaya
Cpa.g.sc23.154 Carica papaya
Cpa.g.sc23.156 Carica papaya
Cpa.g.sc23.157 Carica papaya
Cre12.g486209 Chlamydomonas reinhardtii
CsaV3_1G030910 Cucumis sativus L.
CSS0011692 Camellia sinensis var. sinensis
CSS0041174 Camellia sinensis var. sinensis
DCAR_028737 Daucus carota
Dinv36598 Davidia involucrata
Dinv41561 Davidia involucrata
Dinv41570 Davidia involucrata
Duzib168G1140 Durio zibethinus
ECA234G2971 Erigeron canadensis
EL10Ac8g19346 Beta vulgaris
Eucgr.C04138 Eucalyptus grandis
FAN19G0708 Fragaria x ananassa
FAN19G2601 Fragaria x ananassa
FAN23G1072 Fragaria x ananassa
FAN23G1240 Fragaria x ananassa
FAN23G1875 Fragaria x ananassa
FAN23G2146 Fragaria x ananassa
FAN26G1450 Fragaria x ananassa
FAN26G2098 Fragaria x ananassa
FAN28G0537 Fragaria x ananassa
FvH4_1g04290 Fragaria vesca
FvH4_1g04983 Fragaria vesca
FvH4_1g04984 Fragaria vesca
FvH4_1g04990 Fragaria vesca
FvH4_5g25070 Fragaria vesca
Glyma.05G012400 Glycine max
Glyma.17G120500 Glycine max
Gohir.A05G021000 Gossypium hirsutum
Gohir.A06G060200 Gossypium hirsutum
Gohir.A06G060266 Gossypium hirsutum
Gohir.D05G022400 Gossypium hirsutum
Gohir.D06G058501 Gossypium hirsutum
Gorai.009G022700 Gossypium raimondii
Gorai.010G068600 Gossypium raimondii
GSVIVG01015441001 Vitis vinifera
GSVIVG01015442001 Vitis vinifera
HanXRQChr10g0317421 Helianthus annuus
Haze_25676 Corylus avellana
Hma1.2p1_0245F.1_g101380 Hydrangea macrophylla
Hma1.2p1_0245F.1_g101400 Hydrangea macrophylla
HPP92_014850 Vanilla planifolia
HPP92_014851 Vanilla planifolia
HPP92_014852 Vanilla planifolia
Hund12706 Selenicereus undatus
Hund12707 Selenicereus undatus
Lalb_Chr12g0197621 Lupinus albus
Lalb_Chr13g0302281 Lupinus albus
Lj4g0009521 Lotus japonicus
Lj7C641G5 Lonicera japonica
Lsat_1_v5_gn_1_94860 Lactuca sativa
Lsat_1_v5_gn_5_99761 Lactuca sativa
Lsat_1_v5_gn_7_20540 Lactuca sativa
Manes.03G068200 Manihot esculenta
Manes.16G064500 Manihot esculenta
Mapoly0043s0138 Marchantia polymorpha
MBI09_g30143_MAGBIO Magnolia biondii
MD02G1042600 Malus domestica
MD15G1181200 Malus domestica
Medtr4g112045 Medicago truncatula
MELO3C025310.2 Cucumis melo
Migut.J01184 Erythranthe guttata
MSTRG.6069 Avicennia marina
Nitab4.5_0000100g0300 Nicotiana tabacum
Nitab4.5_0000237g0010 Nicotiana tabacum
Nitab4.5_0002116g0020 Nicotiana tabacum
Nitab4.5_0002116g0030 Nicotiana tabacum
Nitab4.5_0002116g0040 Nicotiana tabacum
Nn8g39280 Nelumbo nucifera
Oeu002223.1 Olea europaea
Os10g0575200 Oryza sativa ssp. japonica
Peaxi162Scf00256g00812 Petunia axillaris
Peaxi162Scf00256g00815 Petunia axillaris
Peaxi162Scf00256g00817 Petunia axillaris
PGR102G1985 Punica granatum
PGSC0003DMG400013949 Solanum tuberosum
Phvul.003G176300 Phaseolus vulgaris
Potri.018G072600 Populus trichocarpa
Pp3c13_3460 Physcomitrium patens
Pp3c3_6650 Physcomitrium patens
Pp3c3_6660 Physcomitrium patens
Pp3c4_24650 Physcomitrium patens
PRCOL_00006435 Prasinoderma coloniale
Prupe.7G234400 Prunus persica
Psat4g042800 Pisum sativum
PSO170G5328 Papaver somniferum
PSO357G0216 Papaver somniferum
QL02p086231 Quercus lobata
RcHm_v2.0_Chr2g0088851 Rosa chinensis
RcHm_v2.0_Chr2g0089861 Rosa chinensis
Rhsim03G0245400 Rhododendron simsii
Sabra18G0064000 Salix brachista
SalBow6G2056 Salvia bowleyana
Sc08g0004790 Simmondsia chinensis
Sed0024242 Sechium edule
SEGI_03183 Sequoiadendron giganteum
SEGI_35777 Sequoiadendron giganteum
SGA_v2.0_scaffold45G17079 Striga asiatica
SHI03184 Sapria himalayana
SHI03186 Sapria himalayana
SMO358G0126 Selaginella moellendorffii
Solyc08g021920.4 Solanum lycopersicum
Sopen08g011820 Solanum pennellii
Sp4g08590 Schrenkiella parvula
TAR374G0606 Trochodendron aralioides
TAR383G0813 Trochodendron aralioides
TAR626G1854 Trochodendron aralioides
THA.LOC104809021 Tarenaya hassleriana
Thecc.09G115700 Theobroma cacao
Thhalv10001876m.g Eutrema salsugineum
TPR.G26776 Trifolium pratense
TWI63G0927 Tripterygium wilfordii
unitig_22.g6632 Utricularia gibba
unitig_22.g6633 Utricularia gibba
vmacro00971 Vaccinium macrocarpon
vmacro06189 Vaccinium macrocarpon
VMungo1215G1596 Vigna mungo
Zm00001eb024320 Zea mays
Zm00001eb383750 Zea mays
Zm00001eb390320 Zea mays

User provided reference genes

Program Settings