Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p12510 Brassica napus
A03p52670 Brassica napus
A08p15230 Brassica napus
Aa31LG6G3160 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_340.234 Anthoceros agrestis
Actinidia07305 Actinidia chinensis
Actinidia09536 Actinidia chinensis
Actinidia09537 Actinidia chinensis
Actinidia09538 Actinidia chinensis
Actinidia25800 Actinidia chinensis
Actinidia25801 Actinidia chinensis
Actinidia30157 Actinidia chinensis
Actinidia30158 Actinidia chinensis
Actinidia37517 Actinidia chinensis
Ah.05g177770 Amaranthus hybridus
AL7G32970 Arabidopsis lyrata
Aqoxy1G01842 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.6B4W14 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.B1YDGW Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.EWE7BX Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.FU7SP6 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LM6F6Z Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.N0B60F Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QXN52H Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.S1G2KX Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.TWLQ99 Arachis hypogaea
AT4G21150 Arabidopsis thaliana
ATR0736G006 Amborella trichopoda
Atru.chr5.1725 Acer truncatum
AUR62013766 Chenopodium quinoa
AUR62023389 Chenopodium quinoa
AUR62043414 Chenopodium quinoa
BcaC01g00710 Brassica carinata
BcaC09g51252 Brassica carinata
BcaNung03839 Brassica carinata
BolC1t01458H Brassica oleracea
BolC3t20629H Brassica oleracea
BolC7t45610H Brassica oleracea
BraA01t01195Z Brassica rapa
BraA03t14340Z Brassica rapa
C01p15100 Brassica napus
C03p83480 Brassica napus
C07p51100 Brassica napus
CAN.G106.18 Capsicum annuum
CAN.G54.7 Capsicum annuum
CANSAT01G0671 Cannabis sativa
CARHR227730 Cardamine hirsuta
Carub.0007s2028 Capsella rubella
Ca_08683_v3 Cicer arietinum L.
Ca_09672_v3 Cicer arietinum L.
CBR_g32152 Chara braunii
Cc01_g18200 Coffea canephora
CDE04G2599 Ceratophyllum demersum
CDE07G1087 Ceratophyllum demersum
Cfa013046 Carpinus fangiana
Cfa026969 Carpinus fangiana
Ciclev10019124m.g Citrus clementina
CiPaw.03G266000 Carya illinoinensis
CiPaw.04G187700 Carya illinoinensis
ClCG03G002590 Citrullus lanatus
COL.COLO4_04023 Corchorus olitorius
Cpa.g.sc20.44 Carica papaya
Cre08.g368450 Chlamydomonas reinhardtii
CsaV3_1G015830 Cucumis sativus L.
CsaV3_UNG055460 Cucumis sativus L.
CsaV3_UNG055470 Cucumis sativus L.
CSS0040480 Camellia sinensis var. sinensis
CSS0049010 Camellia sinensis var. sinensis
DCAR_000921 Daucus carota
Dinv34637 Davidia involucrata
Duzib133G1085 Durio zibethinus
Duzib138G1036 Durio zibethinus
Duzib211G0290 Durio zibethinus
ECA236G3831 Erigeron canadensis
EL10Ac1g00739 Beta vulgaris
EL10Ac1g02094 Beta vulgaris
Eucgr.K03255 Eucalyptus grandis
FAN15G3248 Fragaria x ananassa
FAN20G1425 Fragaria x ananassa
FAN24G2691 Fragaria x ananassa
FAN27G0576 Fragaria x ananassa
FAN27G1677 Fragaria x ananassa
FvH4_2g21250 Fragaria vesca
Glyma.03G164400 Glycine max
Glyma.10G038000 Glycine max
Glyma.19G165800 Glycine max
Glyma.20G047351 Glycine max
Gohir.A01G185580 Gossypium hirsutum
Gohir.A07G149800 Gossypium hirsutum
Gohir.A11G131600 Gossypium hirsutum
Gohir.D07G156100 Gossypium hirsutum
Gohir.D11G137575 Gossypium hirsutum
Gorai.001G179000 Gossypium raimondii
Gorai.007G147600 Gossypium raimondii
GSVIVG01028357001 Vitis vinifera
HanXRQChr04g0110491 Helianthus annuus
HanXRQChr11g0336771 Helianthus annuus
Haze_21407 Corylus avellana
Hma1.2p1_0273F.1_g109540 Hydrangea macrophylla
Hma1.2p1_0576F.1_g181950 Hydrangea macrophylla
HPP92_000351 Vanilla planifolia
HPP92_000418 Vanilla planifolia
Hund17111 Selenicereus undatus
Lalb_Chr02g0152551 Lupinus albus
Lalb_Chr21g0313961 Lupinus albus
Lj1C68G8 Lonicera japonica
Lj5g0026512 Lotus japonicus
Lsat_1_v5_gn_3_107020 Lactuca sativa
Lsat_1_v5_gn_4_881 Lactuca sativa
Lsat_1_v5_gn_5_182920 Lactuca sativa
Lsat_1_v5_gn_8_92540 Lactuca sativa
Lsat_1_v5_gn_9_27880 Lactuca sativa
Manes.12G033700 Manihot esculenta
Manes.13G035300 Manihot esculenta
Mapoly0028s0115 Marchantia polymorpha
MD05G1194900 Malus domestica
MD10G1181500 Malus domestica
Medtr1g069780 Medicago truncatula
MELO3C025537.2 Cucumis melo
Migut.D00439 Erythranthe guttata
MSTRG.21485 Avicennia marina
Nitab4.5_0000413g0180 Nicotiana tabacum
Nitab4.5_0001572g0020 Nicotiana tabacum
Nitab4.5_0005095g0020 Nicotiana tabacum
Nitab4.5_0005411g0050 Nicotiana tabacum
Nn1g02814 Nelumbo nucifera
Nn3g19693 Nelumbo nucifera
Oeu052043.2 Olea europaea
Os01g0911200 Oryza sativa ssp. japonica
Peaxi162Scf00320g00717 Petunia axillaris
Peaxi162Scf00906g00225 Petunia axillaris
PGR031G0689 Punica granatum
Phvul.001G162000 Phaseolus vulgaris
Phvul.007G191800 Phaseolus vulgaris
Potri.002G036600 Populus trichocarpa
Potri.005G226100 Populus trichocarpa
Pp3c11_18110 Physcomitrium patens
Pp3c7_6480 Physcomitrium patens
Prupe.8G221600 Prunus persica
Psat0ss9065g0080 Pisum sativum
Psat3g056400 Pisum sativum
Psat6g054080 Pisum sativum
Psat6g086960 Pisum sativum
Psat6g087000 Pisum sativum
Psat7g093680 Pisum sativum
PSO210G5136 Papaver somniferum
PSO832G2930 Papaver somniferum
QL09p039591 Quercus lobata
RcHm_v2.0_Chr6g0287811 Rosa chinensis
Rhsim01G0262400 Rhododendron simsii
Rhsim13G0036100 Rhododendron simsii
Sabra02G0029600 Salix brachista
Sabra05G0174600 Salix brachista
SalBow4G0483 Salvia bowleyana
Sc02g0003190 Simmondsia chinensis
Sed0001928 Sechium edule
SEGI_27157 Sequoiadendron giganteum
SEGI_31370 Sequoiadendron giganteum
SGA_v2.0_scaffold138G35211 Striga asiatica
SGA_v2.0_scaffold1G00624 Striga asiatica
SHI09762 Sapria himalayana
SMO367G0218 Selaginella moellendorffii
Solyc05g046330.4 Solanum lycopersicum
Solyc07g014700.4 Solanum lycopersicum
Sopen05g027610 Solanum pennellii
Sopen07g005600 Solanum pennellii
Sp7g19230 Schrenkiella parvula
TAR362G0778 Trochodendron aralioides
TAR633G0796 Trochodendron aralioides
THA.LOC104806254 Tarenaya hassleriana
THA.LOC104812416 Tarenaya hassleriana
Thecc.01G255900 Theobroma cacao
Thhalv10024580m.g Eutrema salsugineum
TPR.G5874 Trifolium pratense
TPR.G9204 Trifolium pratense
TWI12G1081 Tripterygium wilfordii
TWI75G1389 Tripterygium wilfordii
unitig_22.g5287 Utricularia gibba
unitig_8.g3735 Utricularia gibba
vmacro02673 Vaccinium macrocarpon
vmacro14814 Vaccinium macrocarpon
VMungo0720G0687 Vigna mungo
VMungo1383G2169 Vigna mungo
Zm00001eb143710 Zea mays
Zm00001eb365020 Zea mays

User provided reference genes

Program Settings