Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p11700 Brassica napus
Aa31sc200G80 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_369.444 Anthoceros agrestis
Actinidia21961 Actinidia chinensis
Actinidia21962 Actinidia chinensis
Actinidia21963 Actinidia chinensis
Actinidia26375 Actinidia chinensis
Actinidia26376 Actinidia chinensis
Ah.14g079420 Amaranthus hybridus
Ah.14g079450 Amaranthus hybridus
AL8G27060 Arabidopsis lyrata
Aqoxy1G03770 Aquilegia oxysepala
Aqoxy2G01281 Aquilegia oxysepala
Aqoxy4G01575 Aquilegia oxysepala
Aqoxy6G02456 Aquilegia oxysepala
Aqoxy7G02295 Aquilegia oxysepala
Aqoxy7G03099 Aquilegia oxysepala
Aqoxy7G03107 Aquilegia oxysepala
Aqoxy7G03655 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.JNHH0Q Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.MEAQ3W Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QEV4QV Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ZHFU2E Arachis hypogaea
AT5G52580 Arabidopsis thaliana
ATR0724G026 Amborella trichopoda
Atru.chr7.1107 Acer truncatum
AUR62011169 Chenopodium quinoa
AUR62013315 Chenopodium quinoa
BcaB08g35617 Brassica carinata
BcaC03g14516 Brassica carinata
BNapus_Darmor_BZH_scaffold_232p00030 Brassica napus
BolC2t08086H Brassica oleracea
BraA02t06235Z Brassica rapa
CAN.G551.81 Capsicum annuum
CAN.G778.1 Capsicum annuum
CANSAT11G0921 Cannabis sativa
CARHR265580 Cardamine hirsuta
Carub.0008s1272 Capsella rubella
Ca_06936_v3 Cicer arietinum L.
Ca_30465_v3 Cicer arietinum L.
CBR_g5611 Chara braunii
CBR_g5615 Chara braunii
Cc06_g08140 Coffea canephora
CDE06G0531 Ceratophyllum demersum
CDE06G1365 Ceratophyllum demersum
Cfa003414 Carpinus fangiana
Ciclev10007683m.g Citrus clementina
CiPaw.03G247500 Carya illinoinensis
CiPaw.04G174300 Carya illinoinensis
ClCG11G003270 Citrullus lanatus
COL.COLO4_13247 Corchorus olitorius
COL.COLO4_35140 Corchorus olitorius
Cpa.g.sc46.33 Carica papaya
Cre12.g537750 Chlamydomonas reinhardtii
CsaV3_2G003070 Cucumis sativus L.
CSS0018269 Camellia sinensis var. sinensis
CSS0025306 Camellia sinensis var. sinensis
CSS0028261 Camellia sinensis var. sinensis
CSS0038528 Camellia sinensis var. sinensis
CSS0040306 Camellia sinensis var. sinensis
CSS0041787 Camellia sinensis var. sinensis
DCAR_002961 Daucus carota
DCAR_009320 Daucus carota
DCAR_014898 Daucus carota
Dinv36486 Davidia involucrata
Dinv36487 Davidia involucrata
Dinv41482 Davidia involucrata
Duzib168G1487 Durio zibethinus
Duzib187G1288 Durio zibethinus
ECA240G3427 Erigeron canadensis
EL10Ac8g18710 Beta vulgaris
Eucgr.C01375 Eucalyptus grandis
FAN03G2184 Fragaria x ananassa
FAN06G0971 Fragaria x ananassa
FAN10G3828 Fragaria x ananassa
FAN19G0930 Fragaria x ananassa
FAN23G0973 Fragaria x ananassa
FAN26G2736 Fragaria x ananassa
FAN28G2297 Fragaria x ananassa
FvH4_1g02680 Fragaria vesca
FvH4_7g25820 Fragaria vesca
Glyma.13G159100 Glycine max
Glyma.17G112200 Glycine max
Gohir.A05G014800 Gossypium hirsutum
Gohir.A05G384100 Gossypium hirsutum
Gohir.A06G054000 Gossypium hirsutum
Gohir.A08G238200 Gossypium hirsutum
Gohir.A10G147066 Gossypium hirsutum
Gohir.A11G177700 Gossypium hirsutum
Gohir.D05G016000 Gossypium hirsutum
Gohir.D06G053000 Gossypium hirsutum
Gohir.D06G068266 Gossypium hirsutum
Gohir.D08G258900 Gossypium hirsutum
Gorai.004G276400 Gossypium raimondii
Gorai.009G016100 Gossypium raimondii
Gorai.010G061900 Gossypium raimondii
GSVIVG01015576001 Vitis vinifera
GSVIVG01015579001 Vitis vinifera
HanXRQChr03g0060941 Helianthus annuus
HanXRQChr03g0063211 Helianthus annuus
HanXRQChr09g0243961 Helianthus annuus
Haze_25522 Corylus avellana
Haze_25523 Corylus avellana
Hma1.2p1_0634F.1_g192980 Hydrangea macrophylla
HPP92_010889 Vanilla planifolia
HPP92_010898 Vanilla planifolia
Hund09277 Selenicereus undatus
Hund26546 Selenicereus undatus
Lalb_Chr07g0179131 Lupinus albus
Lalb_Chr12g0198081 Lupinus albus
Lj4g0002653 Lotus japonicus
Lj7A427G45 Lonicera japonica
Lsat_1_v5_gn_0_33740 Lactuca sativa
Lsat_1_v5_gn_5_91980 Lactuca sativa
Lsat_1_v5_gn_7_44181 Lactuca sativa
Lsat_1_v5_gn_8_62521 Lactuca sativa
Manes.06G048400 Manihot esculenta
Manes.14G115300 Manihot esculenta
Mapoly0045s0037 Marchantia polymorpha
MBI15_g08165_MAGBIO Magnolia biondii
MD02G1027400 Malus domestica
MD15G1168800 Malus domestica
Medtr4g115090 Medicago truncatula
MELO3C004462.2 Cucumis melo
Migut.J01218 Erythranthe guttata
MSTRG.6072 Avicennia marina
Nitab4.5_0000028g0040 Nicotiana tabacum
Nitab4.5_0001349g0040 Nicotiana tabacum
Nitab4.5_0006319g0050 Nicotiana tabacum
Nitab4.5_0012287g0010 Nicotiana tabacum
Nn2g12095 Nelumbo nucifera
Oeu055968.1 Olea europaea
Os02g0709800 Oryza sativa ssp. japonica
Peaxi162Scf00088g01619 Petunia axillaris
Peaxi162Scf00313g00819 Petunia axillaris
PGR142G2827 Punica granatum
PGSC0003DMG400001516 Solanum tuberosum
PGSC0003DMG401030895 Solanum tuberosum
PGSC0003DMG402030895 Solanum tuberosum
Phvul.003G167800 Phaseolus vulgaris
Potri.006G066300 Populus trichocarpa
Potri.018G127500 Populus trichocarpa
Pp3c20_14740 Physcomitrium patens
Pp3c8_12860 Physcomitrium patens
Pp3c8_12870 Physcomitrium patens
PRCOL_00001840 Prasinoderma coloniale
Prupe.7G247700 Prunus persica
Psat4g040040 Pisum sativum
PSO210G0578 Papaver somniferum
PSO210G7704 Papaver somniferum
QL02p089699 Quercus lobata
QL12p005271 Quercus lobata
RcHm_v2.0_Chr2g0087771 Rosa chinensis
RcHm_v2.0_Chr7g0194011 Rosa chinensis
Rhsim01G0064300 Rhododendron simsii
Sabra06G0049200 Salix brachista
Sabra18G0108200 Salix brachista
SalBow6G6762 Salvia bowleyana
Sc14g0000170 Simmondsia chinensis
Sed0019028 Sechium edule
Sed0027813 Sechium edule
SEGI_13709 Sequoiadendron giganteum
SGA_v2.0_scaffold229G43305 Striga asiatica
SHI28844 Sapria himalayana
SHI28847 Sapria himalayana
SMO137G0381 Selaginella moellendorffii
Solyc12g009610.2 Solanum lycopersicum
Sopen07g003880 Solanum pennellii
Sopen12g004600 Solanum pennellii
Sp6g14780 Schrenkiella parvula
TAR625G0037 Trochodendron aralioides
TAR636G2912 Trochodendron aralioides
THA.LOC104826549 Tarenaya hassleriana
Thecc.09G130900 Theobroma cacao
Thhalv10012867m.g Eutrema salsugineum
TPR.G26469 Trifolium pratense
TWI32G0090 Tripterygium wilfordii
TWI63G0928 Tripterygium wilfordii
unitig_60.g25513 Utricularia gibba
vmacro06150 Vaccinium macrocarpon
vmacro06151 Vaccinium macrocarpon
vmacro07715 Vaccinium macrocarpon
VMungo1215G1390 Vigna mungo
VMungo1215G2674 Vigna mungo
Zm00001eb188660 Zea mays

User provided reference genes

Program Settings