Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A10p17940 Brassica napus
Aa31LG1G12660 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.2800 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.1662 Anthoceros agrestis
Actinidia03720 Actinidia chinensis
Actinidia07146 Actinidia chinensis
Actinidia07147 Actinidia chinensis
Actinidia13049 Actinidia chinensis
Actinidia24111 Actinidia chinensis
Ah.01g003010 Amaranthus hybridus
AL8G37290 Arabidopsis lyrata
Aqoxy1G01219 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.8QPZ90 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.BKDH6Z Arachis hypogaea
AT5G60700 Arabidopsis thaliana
ATR0048G003 Amborella trichopoda
Atru.chr3.3608 Acer truncatum
AUR62022789 Chenopodium quinoa
AUR62042199 Chenopodium quinoa
BcaB05g22662 Brassica carinata
BcaB08g36372 Brassica carinata
BcaC02g10354 Brassica carinata
BcaC03g13945 Brassica carinata
BcaC04g19732 Brassica carinata
BcaC04g20013 Brassica carinata
BcaC06g36081 Brassica carinata
BcaC07g41150 Brassica carinata
BcaC08g44367 Brassica carinata
BNapus_Darmor_BZH_scaffold_38p00110 Brassica napus
BolC2t07227H Brassica oleracea
BolC6t37008H Brassica oleracea
BolC7t41224H Brassica oleracea
BolC8t51708H Brassica oleracea
BolC9t58217H Brassica oleracea
BraA02t05710Z Brassica rapa
BraA03t15005Z Brassica rapa
BraA08t33776Z Brassica rapa
BraA10t43869Z Brassica rapa
C02p11520 Brassica napus
C03p42240 Brassica napus
C06p18020 Brassica napus
C07p08060 Brassica napus
C08p41470 Brassica napus
C09p53430 Brassica napus
CAN.G1966.3 Capsicum annuum
CAN.G631.39 Capsicum annuum
CANSAT54G2133 Cannabis sativa
CARHR274380 Cardamine hirsuta
Carub.0008s2138 Capsella rubella
Ca_20855_v3 Cicer arietinum L.
CBR_g21817 Chara braunii
CBR_g38047 Chara braunii
Cc01_g10960 Coffea canephora
CDE03G0469 Ceratophyllum demersum
CDE04G3105 Ceratophyllum demersum
CDE07G1448 Ceratophyllum demersum
Cfa022234 Carpinus fangiana
Ciclev10030090m.g Citrus clementina
CiPaw.13G115700 Carya illinoinensis
ClCG01G013560 Citrullus lanatus
COL.COLO4_18316 Corchorus olitorius
Cpa.g.sc279.5 Carica papaya
CsaV3_1G013950 Cucumis sativus L.
CSS0039471 Camellia sinensis var. sinensis
CSS0046644 Camellia sinensis var. sinensis
DCAR_017883 Daucus carota
DCAR_018798 Daucus carota
DCAR_022764 Daucus carota
Dinv32729 Davidia involucrata
Duzib150G0819 Durio zibethinus
Duzib168G1405 Durio zibethinus
ECA238G0686 Erigeron canadensis
EL10Ac9g22541 Beta vulgaris
Eucgr.B02513 Eucalyptus grandis
FAN11G3344 Fragaria x ananassa
FAN16G2552 Fragaria x ananassa
FAN21G0199 Fragaria x ananassa
FAN25G0709 Fragaria x ananassa
FvH4_3g31890 Fragaria vesca
Glyma.11G145200 Glycine max
Glyma.12G076600 Glycine max
Gohir.A03G032400 Gossypium hirsutum
Gohir.A05G104300 Gossypium hirsutum
Gohir.A08G199100 Gossypium hirsutum
Gohir.D03G136000 Gossypium hirsutum
Gohir.D05G104100 Gossypium hirsutum
Gohir.D08G216500 Gossypium hirsutum
Gorai.003G143100 Gossypium raimondii
Gorai.004G230400 Gossypium raimondii
Gorai.009G108300 Gossypium raimondii
GSVIVG01025204001 Vitis vinifera
HanXRQChr14g0452661 Helianthus annuus
Haze_23797 Corylus avellana
Haze_23798 Corylus avellana
Hma1.2p1_0307F.1_g119810 Hydrangea macrophylla
HPP92_013379 Vanilla planifolia
HPP92_025357 Vanilla planifolia
HPP92_025358 Vanilla planifolia
Hund08163 Selenicereus undatus
Lalb_Chr01g0004371 Lupinus albus
Lalb_Chr03g0027461 Lupinus albus
Lj1A202T36 Lonicera japonica
Lj2C1024T6 Lonicera japonica
Lj3g0001899 Lotus japonicus
Lj3g0004216 Lotus japonicus
Lsat_1_v5_gn_2_100500 Lactuca sativa
Manes.04G019400 Manihot esculenta
Manes.11G147100 Manihot esculenta
Mapoly0151s0026 Marchantia polymorpha
MBI07_g42224_MAGBIO Magnolia biondii
MBI10_g19605_MAGBIO Magnolia biondii
MD03G1120400 Malus domestica
MD11G1138800 Malus domestica
Medtr4g058760 Medicago truncatula
MELO3C004898.2 Cucumis melo
Migut.D02239 Erythranthe guttata
Migut.N02587 Erythranthe guttata
Migut.O00751 Erythranthe guttata
MSTRG.18670 Avicennia marina
Nitab4.5_0000106g0250 Nicotiana tabacum
Nitab4.5_0000106g0280 Nicotiana tabacum
Nitab4.5_0000602g0070 Nicotiana tabacum
Nitab4.5_0001939g0040 Nicotiana tabacum
Nitab4.5_0010325g0010 Nicotiana tabacum
Nn2g10822 Nelumbo nucifera
Nn2g13122 Nelumbo nucifera
Oeu001285.1 Olea europaea
Os02g0806500 Oryza sativa ssp. japonica
Os09g0434600 Oryza sativa ssp. japonica
Peaxi162Scf00029g01511 Petunia axillaris
Peaxi162Scf00270g00113 Petunia axillaris
PGR102G2693 Punica granatum
PGSC0003DMG400008087 Solanum tuberosum
Phvul.011G080500 Phaseolus vulgaris
Potri.004G212000 Populus trichocarpa
Potri.009G010900 Populus trichocarpa
Pp3c12_13710 Physcomitrium patens
Pp3c3_14800 Physcomitrium patens
Pp3c3_5960 Physcomitrium patens
Pp3c4_16750 Physcomitrium patens
Prupe.6G103800 Prunus persica
Psat7g144800 Pisum sativum
PSO063G6987 Papaver somniferum
PSO339G1383 Papaver somniferum
PSO339G1676 Papaver somniferum
PSO384G2520 Papaver somniferum
QL01p021761 Quercus lobata
RcHm_v2.0_Chr5g0058661 Rosa chinensis
Rhsim01G0215800 Rhododendron simsii
Rhsim13G0095500 Rhododendron simsii
Sabra04G0143400 Salix brachista
Sabra09G0006800 Salix brachista
SalBow3G2648 Salvia bowleyana
Sc15g0001490 Simmondsia chinensis
Sed0011730 Sechium edule
SEGI_02314 Sequoiadendron giganteum
SEGI_03824 Sequoiadendron giganteum
SEGI_21871 Sequoiadendron giganteum
SEGI_28974 Sequoiadendron giganteum
SGA_v2.0_scaffold116G32255 Striga asiatica
SGA_v2.0_scaffold180G39648 Striga asiatica
SMO118G0436 Selaginella moellendorffii
SMO165G0075 Selaginella moellendorffii
Solyc06g075100.3 Solanum lycopersicum
Solyc11g069560.2 Solanum lycopersicum
Sopen06g031520 Solanum pennellii
Sopen11g028270 Solanum pennellii
Sp6g22270 Schrenkiella parvula
TAR633G1536 Trochodendron aralioides
THA.LOC104810862 Tarenaya hassleriana
Thecc.09G342900 Theobroma cacao
Thhalv10012601m.g Eutrema salsugineum
TPR.G6161 Trifolium pratense
TWI75G0420 Tripterygium wilfordii
TWI79G0067 Tripterygium wilfordii
unitig_27.g25054 Utricularia gibba
unitig_8.g3002 Utricularia gibba
unitig_8.g3003 Utricularia gibba
unitig_8.g3004 Utricularia gibba
unitig_8.g3298 Utricularia gibba
unitig_8.g3299 Utricularia gibba
vmacro03207 Vaccinium macrocarpon
vmacro14427 Vaccinium macrocarpon
VMungo1127G1929 Vigna mungo
Zm00001eb258310 Zea mays

User provided reference genes

Program Settings