Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p34380 Brassica napus
A09p06960 Brassica napus
Aa31LG11G2840 Aethionema arabicum
Actinidia14055 Actinidia chinensis
Ah.03g141660 Amaranthus hybridus
Ah.08g219840 Amaranthus hybridus
Ah.13g066700 Amaranthus hybridus
AL6G34670 Arabidopsis lyrata
Aqoxy3G03201 Aquilegia oxysepala
Aqoxy3G04323 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.9YN8B0 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.UDT0Z0 Arachis hypogaea
AT5G23400 Arabidopsis thaliana
ATR0124G032 Amborella trichopoda
Atru.chr11.1887 Acer truncatum
Atru.chr11.62 Acer truncatum
AUR62004031 Chenopodium quinoa
AUR62007539 Chenopodium quinoa
AUR62017748 Chenopodium quinoa
AUR62027161 Chenopodium quinoa
AUR62030057 Chenopodium quinoa
AUR62032905 Chenopodium quinoa
AUR62038925 Chenopodium quinoa
AUR62038929 Chenopodium quinoa
AUR62039001 Chenopodium quinoa
BcaB04g19870 Brassica carinata
BcaC04g23494 Brassica carinata
BcaC04g23496 Brassica carinata
BcaNung03728 Brassica carinata
BcaNung03849 Brassica carinata
BolC7t44939H Brassica oleracea
BolC9t53686H Brassica oleracea
BolC9t53689H Brassica oleracea
BraA06t26368Z Brassica rapa
BraA09t36344Z Brassica rapa
C07p44150 Brassica napus
C09p07690 Brassica napus
C09p07720 Brassica napus
CAN.G419.8 Capsicum annuum
CANSAT25G3818 Cannabis sativa
CANSAT78G0563 Cannabis sativa
CARHR190100 Cardamine hirsuta
Ca_11275_v3 Cicer arietinum L.
Ca_22829_v3 Cicer arietinum L.
Cc00_g34130 Coffea canephora
Cc07_g10880 Coffea canephora
Cc11_g04520 Coffea canephora
Cc11_g13790 Coffea canephora
Cfa009051 Carpinus fangiana
Cfa018676 Carpinus fangiana
Ciclev10014664m.g Citrus clementina
Ciclev10030933m.g Citrus clementina
CiPaw.06G078800 Carya illinoinensis
CiPaw.15G001000 Carya illinoinensis
ClCG05G024800 Citrullus lanatus
ClCG11G012730 Citrullus lanatus
COL.COLO4_33134 Corchorus olitorius
Cpa.g.sc247.2 Carica papaya
Cpa.g.sc5.300 Carica papaya
CsaV3_5G029110 Cucumis sativus L.
CSS0015770 Camellia sinensis var. sinensis
CSS0018763 Camellia sinensis var. sinensis
CSS0050258 Camellia sinensis var. sinensis
DCAR_002613 Daucus carota
DCAR_026875 Daucus carota
DCAR_030350 Daucus carota
DCAR_031072 Daucus carota
Dinv02933 Davidia involucrata
Dinv31151 Davidia involucrata
Duzib132G0369 Durio zibethinus
Duzib248G0348 Durio zibethinus
Duzib248G0880 Durio zibethinus
ECA234G2588 Erigeron canadensis
EL10Ac6g13117 Beta vulgaris
EL10Ac6g15595 Beta vulgaris
EL10As1g23058 Beta vulgaris
Eucgr.B02583 Eucalyptus grandis
Eucgr.J00335 Eucalyptus grandis
FAN07G0376 Fragaria x ananassa
FAN12G2515 Fragaria x ananassa
FAN17G0997 Fragaria x ananassa
FAN17G2689 Fragaria x ananassa
FvH4_4g35490 Fragaria vesca
FvH4_4g37290 Fragaria vesca
Glyma.08G294200 Glycine max
Glyma.10G288400 Glycine max
Glyma.20G100500 Glycine max
Gohir.A04G109488 Gossypium hirsutum
Gohir.A13G062600 Gossypium hirsutum
Gohir.D02G168400 Gossypium hirsutum
Gohir.D04G149600 Gossypium hirsutum
Gohir.D13G059300 Gossypium hirsutum
Gorai.005G188800 Gossypium raimondii
Gorai.012G136100 Gossypium raimondii
Gorai.013G067100 Gossypium raimondii
GSVIVG01020115001 Vitis vinifera
GSVIVG01034362001 Vitis vinifera
HanXRQChr05g0129661 Helianthus annuus
HanXRQChr17g0565511 Helianthus annuus
Haze_12084 Corylus avellana
Haze_17404 Corylus avellana
Hma1.2p1_0513F.1_g169520 Hydrangea macrophylla
HPP92_005410 Vanilla planifolia
Lalb_Chr06g0164351 Lupinus albus
Lalb_Chr21g0307451 Lupinus albus
Lj3P845T43 Lonicera japonica
Lj5g0004456 Lotus japonicus
Lsat_1_v5_gn_4_26320 Lactuca sativa
Manes.04G161700 Manihot esculenta
MBI03_g13449_MAGBIO Magnolia biondii
MD04G1242300 Malus domestica
MD13G1001800 Malus domestica
MD13G1082800 Malus domestica
MD16G1004400 Malus domestica
Medtr1g115225 Medicago truncatula
MELO3C011763.2 Cucumis melo
Migut.E00665 Erythranthe guttata
MSTRG.2078 Avicennia marina
Nitab4.5_0002542g0070 Nicotiana tabacum
Nitab4.5_0002707g0050 Nicotiana tabacum
Nitab4.5_0007445g0060 Nicotiana tabacum
Nn3g17076 Nelumbo nucifera
Nn3g18556 Nelumbo nucifera
Nn4g22989 Nelumbo nucifera
Nn4g25174 Nelumbo nucifera
Nn6g31513 Nelumbo nucifera
Oeu017056.1 Olea europaea
Oeu044547.1 Olea europaea
Os04g0677200 Oryza sativa ssp. japonica
Peaxi162Scf00209g00095 Petunia axillaris
Peaxi162Scf00329g10011 Petunia axillaris
Peaxi162Scf01023g00011 Petunia axillaris
PGR044G0096 Punica granatum
PGR119G1302 Punica granatum
PGSC0003DMG400022599 Solanum tuberosum
PGSC0003DMG400025295 Solanum tuberosum
Phvul.002G079700 Phaseolus vulgaris
Phvul.003G071800 Phaseolus vulgaris
Phvul.007G012600 Phaseolus vulgaris
Potri.007G001000 Populus trichocarpa
Potri.010G040200 Populus trichocarpa
Prupe.1G264100 Prunus persica
Prupe.1G350800 Prunus persica
Psat3g129920 Pisum sativum
Psat6g235760 Pisum sativum
PSO063G7530 Papaver somniferum
PSO384G2660 Papaver somniferum
PSO591G0487 Papaver somniferum
PSO782G1796 Papaver somniferum
QL01p000462 Quercus lobata
QL01p000551 Quercus lobata
QL03p066654 Quercus lobata
RcHm_v2.0_Chr4g0445141 Rosa chinensis
RcHm_v2.0_Chr4g0447111 Rosa chinensis
Rhsim12G0128000 Rhododendron simsii
Sabra10G0026800 Salix brachista
SalBow1G1174 Salvia bowleyana
SalBow2G0672 Salvia bowleyana
SalBow8G1717 Salvia bowleyana
Sed0022802 Sechium edule
Sed0025699 Sechium edule
SEGI_16014 Sequoiadendron giganteum
SEGI_32213 Sequoiadendron giganteum
SEGI_35018 Sequoiadendron giganteum
SGA_v2.0_scaffold127G33974 Striga asiatica
Solyc04g008830.1 Solanum lycopersicum
Solyc05g006670.2 Solanum lycopersicum
Sopen04g004010 Solanum pennellii
Sopen05g002610 Solanum pennellii
Sp2g23760 Schrenkiella parvula
TAR371G0400 Trochodendron aralioides
TAR629G0220 Trochodendron aralioides
TAR629G2945 Trochodendron aralioides
TAR636G0434 Trochodendron aralioides
THA.LOC104800622 Tarenaya hassleriana
Thecc.02G153100 Theobroma cacao
Thecc.02G236300 Theobroma cacao
Thhalv10003885m.g Eutrema salsugineum
TPR.G29001 Trifolium pratense
TPR.G4085 Trifolium pratense
TWI53G0779 Tripterygium wilfordii
TWI75G1349 Tripterygium wilfordii
unitig_27.g25290 Utricularia gibba
VMungo0251G2196 Vigna mungo
VMungo0720G0185 Vigna mungo

User provided reference genes

Program Settings