Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p20860 Brassica napus
A08p04400 Brassica napus
Aa31LG10G4830 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_369.393 Anthoceros agrestis
Actinidia03057 Actinidia chinensis
Actinidia38274 Actinidia chinensis
Actinidia38848 Actinidia chinensis
Ah.06g192010 Amaranthus hybridus
AL1G55580 Arabidopsis lyrata
Aqoxy1G01249 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.6FL4NC Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.914CGH Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.V7IKH4 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.X76XU5 Arachis hypogaea
AT1G48850 Arabidopsis thaliana
ATR0115G006 Amborella trichopoda
Atru.chr12.740 Acer truncatum
AUR62037661 Chenopodium quinoa
AUR62041045 Chenopodium quinoa
BcaB02g11304 Brassica carinata
BcaB04g17381 Brassica carinata
BcaC05g27549 Brassica carinata
BcaC07g37102 Brassica carinata
BolC2t09870H Brassica oleracea
BolC5t32248H Brassica oleracea
BolC8t47272H Brassica oleracea
BraA05t20991Z Brassica rapa
BraA08t32466Z Brassica rapa
C02p38530 Brassica napus
C05p35350 Brassica napus
C05p40290 Brassica napus
C08p04710 Brassica napus
CAN.G186.44 Capsicum annuum
CAN.G186.45 Capsicum annuum
CANSAT56G3258 Cannabis sativa
CANSAT78G2428 Cannabis sativa
CARHR038850 Cardamine hirsuta
Carub.0001s3800 Capsella rubella
Ca_10573_v3 Cicer arietinum L.
Ca_29596_v3 Cicer arietinum L.
CBR_g41627 Chara braunii
CBR_g74262 Chara braunii
Cc09_g02030 Coffea canephora
Cc09_g02040 Coffea canephora
CDE04G2332 Ceratophyllum demersum
CDE07G1562 Ceratophyllum demersum
Cfa022484 Carpinus fangiana
Ciclev10031547m.g Citrus clementina
CiPaw.01G273500 Carya illinoinensis
CiPaw.02G174300 Carya illinoinensis
ClCG08G007450 Citrullus lanatus
COL.COLO4_23690 Corchorus olitorius
COL.COLO4_23691 Corchorus olitorius
Cpa.g.sc53.71 Carica papaya
Cre03.g145747 Chlamydomonas reinhardtii
CsaV3_6G036360 Cucumis sativus L.
CSS0011231 Camellia sinensis var. sinensis
CSS0025729 Camellia sinensis var. sinensis
DCAR_012659 Daucus carota
DCAR_015315 Daucus carota
Dinv11780 Davidia involucrata
Dinv31329 Davidia involucrata
Duzib106G0278 Durio zibethinus
Duzib114G1041 Durio zibethinus
ECA232G2521 Erigeron canadensis
EL10Ac2g03249 Beta vulgaris
Eucgr.G02824 Eucalyptus grandis
Eucgr.J01090 Eucalyptus grandis
FAN01G1080 Fragaria x ananassa
FAN01G1877 Fragaria x ananassa
FAN03G0046 Fragaria x ananassa
FAN06G0474 Fragaria x ananassa
FAN10G2344 Fragaria x ananassa
FAN10G2919 Fragaria x ananassa
FAN12G0587 Fragaria x ananassa
FAN12G0728 Fragaria x ananassa
FAN17G1952 Fragaria x ananassa
FvH4_7g19581 Fragaria vesca
FvH4_7g19670 Fragaria vesca
Glyma.10G211400 Glycine max
Glyma.14G185633 Glycine max
Glyma.14G185666 Glycine max
Glyma.20G179500 Glycine max
Gohir.A05G297100 Gossypium hirsutum
Gohir.A10G206400 Gossypium hirsutum
Gohir.A10G206500 Gossypium hirsutum
Gohir.D05G297000 Gossypium hirsutum
Gohir.D05G297025 Gossypium hirsutum
Gohir.D10G214466 Gossypium hirsutum
Gohir.D10G214532 Gossypium hirsutum
Gohir.D10G214600 Gossypium hirsutum
Gorai.009G314200 Gossypium raimondii
Gorai.011G240100 Gossypium raimondii
Gorai.011G240200 Gossypium raimondii
GSVIVG01016288001 Vitis vinifera
GSVIVG01025176001 Vitis vinifera
HanXRQChr09g0249701 Helianthus annuus
HanXRQChr15g0473851 Helianthus annuus
HanXRQChr15g0496661 Helianthus annuus
Haze_16899 Corylus avellana
Haze_27259 Corylus avellana
Hma1.2p1_1004F.1_g246800 Hydrangea macrophylla
HPP92_012666 Vanilla planifolia
Hund12041 Selenicereus undatus
Lalb_Chr02g0142141 Lupinus albus
Lalb_Chr06g0162271 Lupinus albus
Lj1A914T43 Lonicera japonica
Lj5g0008768 Lotus japonicus
Lsat_1_v5_gn_2_114381 Lactuca sativa
Manes.10G045200 Manihot esculenta
Mapoly0007s0052 Marchantia polymorpha
MBI02_g43493_MAGBIO Magnolia biondii
MBI10_g04889_MAGBIO Magnolia biondii
MCO05G587 Micromonas commoda
MD01G1108900 Malus domestica
MD01G1109200 Malus domestica
MD07G1175200 Malus domestica
Medtr0368s0020 Medicago truncatula
Medtr1g095250 Medicago truncatula
MELO3C019790.2 Cucumis melo
Migut.F01773 Erythranthe guttata
Migut.F01774 Erythranthe guttata
MSTRG.366 Avicennia marina
MSTRG.367 Avicennia marina
MSTRG.8153 Avicennia marina
Nitab4.5_0001029g0070 Nicotiana tabacum
Nitab4.5_0005490g0010 Nicotiana tabacum
Nn2g13085 Nelumbo nucifera
Oeu007390.4 Olea europaea
Oeu027479.1 Olea europaea
Oeu043945.1 Olea europaea
Oeu052763.1 Olea europaea
Os03g0254800 Oryza sativa ssp. japonica
Peaxi162Scf00747g00122 Petunia axillaris
PGR142G1908 Punica granatum
PGSC0003DMG400016016 Solanum tuberosum
PGSC0003DMG400024392 Solanum tuberosum
Phvul.007G094200 Phaseolus vulgaris
Potri.008G040700 Populus trichocarpa
Potri.010G221600 Populus trichocarpa
Pp3c1_35940 Physcomitrium patens
PRCOL_00001179 Prasinoderma coloniale
Prupe.2G214400 Prunus persica
Psat6g184400 Pisum sativum
PSO063G5795 Papaver somniferum
PSO339G3023 Papaver somniferum
QL07p006097 Quercus lobata
QL07p006183 Quercus lobata
QL08p056106 Quercus lobata
QL09p045974 Quercus lobata
RcHm_v2.0_Chr1g0363491 Rosa chinensis
RcHm_v2.0_Chr4g0427911 Rosa chinensis
Rhsim09G0152400 Rhododendron simsii
Sabra08G0027700 Salix brachista
Sabra10G0171500 Salix brachista
SalBow4G1339 Salvia bowleyana
Sc06g0004590 Simmondsia chinensis
Sc09g0006470 Simmondsia chinensis
Sed0016616 Sechium edule
SEGI_31492 Sequoiadendron giganteum
SGA_v2.0_scaffold51G18675 Striga asiatica
SMO146G0105 Selaginella moellendorffii
SMO173G0015 Selaginella moellendorffii
Solyc04g009620.4 Solanum lycopersicum
Solyc04g049350.4 Solanum lycopersicum
Sopen04g004770 Solanum pennellii
Sopen04g019270 Solanum pennellii
Sp1g35740 Schrenkiella parvula
TAR623G1268 Trochodendron aralioides
TAR633G1876 Trochodendron aralioides
TAR636G0034 Trochodendron aralioides
TAR636G0416 Trochodendron aralioides
THA.LOC104827296 Tarenaya hassleriana
Thecc.10G072600 Theobroma cacao
Thhalv10011486m.g Eutrema salsugineum
TPR.G1904 Trifolium pratense
TWI74G0111 Tripterygium wilfordii
TWI74G0263 Tripterygium wilfordii
unitig_736.g22517 Utricularia gibba
unitig_899.g14441 Utricularia gibba
vmacro04876 Vaccinium macrocarpon
VMungo0647G0194 Vigna mungo
VMungo0720G1162 Vigna mungo
VMungo0720G1818 Vigna mungo
Zm00001eb011020 Zea mays
Zm00001eb398410 Zea mays

User provided reference genes

Program Settings