Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p42310 Brassica napus
A06p29150 Brassica napus
A09p07680 Brassica napus
Aa31LG11G1190 Aethionema arabicum
Aa31LG4G16330 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.5404 Anthoceros agrestis
Actinidia04888 Actinidia chinensis
Actinidia37626 Actinidia chinensis
AL8G39330 Arabidopsis lyrata
Aqoxy3G03389 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.4WDU0A Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.6Q68A3 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.DV8NSN Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.G7C7PJ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.H69J8I Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.L6WE06 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.N073K6 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Y09UDZ Arachis hypogaea
AT5G62440 Arabidopsis thaliana
ATR1127G116 Amborella trichopoda
Atru.chr11.2689 Acer truncatum
Atru.chr9.273 Acer truncatum
AUR62008420 Chenopodium quinoa
AUR62021675 Chenopodium quinoa
BcaB02g09647 Brassica carinata
BcaB07g29837 Brassica carinata
BcaC01g02471 Brassica carinata
BcaC03g18149 Brassica carinata
BcaC04g23414 Brassica carinata
BolC2t12276H Brassica oleracea
BolC3t18700H Brassica oleracea
BolC9t53768H Brassica oleracea
BraA02t09160Z Brassica rapa
BraA06t25863Z Brassica rapa
BraA09t36419Z Brassica rapa
C02p62180 Brassica napus
C03p64440 Brassica napus
C09p08590 Brassica napus
CAN.G310.1 Capsicum annuum
CAN.G587.1 Capsicum annuum
CAN.G628.1 Capsicum annuum
CAN.G837.20 Capsicum annuum
CANSAT56G3341 Cannabis sativa
CARHR276240 Cardamine hirsuta
Carub.0008s2312 Capsella rubella
Ca_05341_v3 Cicer arietinum L.
Ca_13772_v3 Cicer arietinum L.
Ca_21822_v3 Cicer arietinum L.
CBR_g38730 Chara braunii
CBR_g54107 Chara braunii
Cc04_g16600 Coffea canephora
CDE08G0283 Ceratophyllum demersum
Cfa018940 Carpinus fangiana
Ciclev10022133m.g Citrus clementina
CiPaw.11G044800 Carya illinoinensis
ClCG06G016210 Citrullus lanatus
COL.COLO4_32291 Corchorus olitorius
COL.COLO4_35537 Corchorus olitorius
COL.COLO4_35889 Corchorus olitorius
Cpa.g.sc111.10 Carica papaya
Cre02.g085950 Chlamydomonas reinhardtii
CsaV3_1G002330 Cucumis sativus L.
DCAR_016563 Daucus carota
DCAR_021520 Daucus carota
Dinv19966 Davidia involucrata
Dinv38714 Davidia involucrata
Duzib205G1944 Durio zibethinus
ECA247G0346 Erigeron canadensis
EL10Ac5g11021 Beta vulgaris
Eucgr.B00508 Eucalyptus grandis
FAN04G3111 Fragaria x ananassa
FAN08G2213 Fragaria x ananassa
FAN13G0167 Fragaria x ananassa
FAN13G0273 Fragaria x ananassa
FAN18G4275 Fragaria x ananassa
FvH4_5g14920 Fragaria vesca
Glyma.04G169200 Glycine max
Glyma.05G026600 Glycine max
Glyma.06G194200 Glycine max
Glyma.17G100300 Glycine max
Gohir.A03G066800 Gossypium hirsutum
Gohir.A11G031331 Gossypium hirsutum
Gohir.A11G031511 Gossypium hirsutum
Gohir.D03G093300 Gossypium hirsutum
Gohir.D11G034700 Gossypium hirsutum
Gohir.D11G035000 Gossypium hirsutum
Gorai.003G097200 Gossypium raimondii
Gorai.007G037600 Gossypium raimondii
Gorai.007G037700 Gossypium raimondii
GSVIVG01007999001 Vitis vinifera
HanXRQChr02g0043591 Helianthus annuus
HanXRQChr04g0107321 Helianthus annuus
Haze_07324 Corylus avellana
Hma1.2p1_1936F.1_g308170 Hydrangea macrophylla
Hma1.2p1_1936F.1_g308180 Hydrangea macrophylla
Hma1.2p1_2516F.1_g323665 Hydrangea macrophylla
HPP92_005935 Vanilla planifolia
Hund02648 Selenicereus undatus
Lalb_Chr07g0178061 Lupinus albus
Lalb_Chr08g0235721 Lupinus albus
Lalb_Chr23g0273811 Lupinus albus
Lj1g0000196 Lotus japonicus
Lj4g0000044 Lotus japonicus
Lj5A110T129 Lonicera japonica
Lsat_1_v5_gn_1_13920 Lactuca sativa
Manes.06G092100 Manihot esculenta
Mapoly0139s0003 Marchantia polymorpha
MBI17_g39902_MAGBIO Magnolia biondii
MCO11G674 Micromonas commoda
MD06G1193500 Malus domestica
MD14G1200600 Malus domestica
Medtr0140s0050 Medicago truncatula
Medtr2g094530 Medicago truncatula
Medtr3g435580 Medicago truncatula
Medtr4g050460 Medicago truncatula
MELO3C017173.2 Cucumis melo
Migut.D01816 Erythranthe guttata
MSTRG.9629 Avicennia marina
Nitab4.5_0001128g0150 Nicotiana tabacum
Nitab4.5_0002078g0040 Nicotiana tabacum
Nitab4.5_0002339g0020 Nicotiana tabacum
Nitab4.5_0006000g0030 Nicotiana tabacum
Nitab4.5_0007189g0070 Nicotiana tabacum
Nitab4.5_0011015g0030 Nicotiana tabacum
Nn3g17245 Nelumbo nucifera
Nn4g23176 Nelumbo nucifera
Oeu047295.1 Olea europaea
Os03g0187000 Oryza sativa ssp. japonica
Peaxi162Scf00013g00333 Petunia axillaris
PGR083G2029 Punica granatum
PGSC0003DMG400019531 Solanum tuberosum
PGSC0003DMG400033045 Solanum tuberosum
Phvul.003G190000 Phaseolus vulgaris
Phvul.009G187000 Phaseolus vulgaris
Potri.005G033100 Populus trichocarpa
Potri.013G021800 Populus trichocarpa
Potri.013G022500 Populus trichocarpa
Pp3c10_17790 Physcomitrium patens
Pp3c20_9520 Physcomitrium patens
Pp3c23_7150 Physcomitrium patens
Pp3c24_12900 Physcomitrium patens
Pp3c24_12910 Physcomitrium patens
PRCOL_00000129 Prasinoderma coloniale
Prupe.5G193800 Prunus persica
Psat4g050880 Pisum sativum
Psat5g193120 Pisum sativum
PSO013G0046 Papaver somniferum
PSO832G2691 Papaver somniferum
QL04p039014 Quercus lobata
QL10p017042 Quercus lobata
RcHm_v2.0_Chr7g0181461 Rosa chinensis
Rhsim07G0194700 Rhododendron simsii
Rhsim08G0137200 Rhododendron simsii
Sabra05G0035300 Salix brachista
Sabra13G0024600 Salix brachista
SalBow7G0736 Salvia bowleyana
Sc04g0002660 Simmondsia chinensis
Sc12g0006380 Simmondsia chinensis
Sed0006743 Sechium edule
Sed0020544 Sechium edule
SEGI_41222 Sequoiadendron giganteum
SGA_v2.0_scaffold114G31908 Striga asiatica
SGA_v2.0_scaffold7G04064 Striga asiatica
SMO141G0011 Selaginella moellendorffii
Solyc03g116020.3 Solanum lycopersicum
Solyc06g069770.3 Solanum lycopersicum
Sopen03g035010 Solanum pennellii
Sopen06g027060 Solanum pennellii
Sp2g25630 Schrenkiella parvula
TAR371G1074 Trochodendron aralioides
TAR381G1035 Trochodendron aralioides
TAR622G0031 Trochodendron aralioides
TAR622G0407 Trochodendron aralioides
TAR633G2224 Trochodendron aralioides
THA.LOC104821421 Tarenaya hassleriana
Thecc.03G087800 Theobroma cacao
TPR.G11909 Trifolium pratense
TPR.G15244 Trifolium pratense
TPR.G9264 Trifolium pratense
TWI81G0244 Tripterygium wilfordii
unitig_62.g23549 Utricularia gibba
vmacro11460 Vaccinium macrocarpon
VMungo1215G2263 Vigna mungo
VMungo1309G1081 Vigna mungo
Zm00001eb006550 Zea mays
Zm00001eb401550 Zea mays

User provided reference genes

Program Settings