Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p04200 Brassica napus
A09p48820 Brassica napus
Aa31LG5G19610 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.2984 Anthoceros agrestis
Actinidia13534 Actinidia chinensis
Actinidia29685 Actinidia chinensis
Actinidia32916 Actinidia chinensis
Ah.07g208150 Amaranthus hybridus
Ah.07g208500 Amaranthus hybridus
AL5G37120 Arabidopsis lyrata
Aqoxy2G00938 Aquilegia oxysepala
Aqoxy7G00521 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.68I314 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.828BJC Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.8Y7MPM Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.DF90RT Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.DW27I3 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.KJJE32 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VSX1SJ Arachis hypogaea
AT3G55830 Arabidopsis thaliana
ATR0618G031 Amborella trichopoda
ATR0661G209 Amborella trichopoda
ATR0661G314 Amborella trichopoda
Atru.chr10.101 Acer truncatum
Atru.chr10.119 Acer truncatum
Atru.chr10.7 Acer truncatum
AUR62012223 Chenopodium quinoa
AUR62016075 Chenopodium quinoa
AUR62021284 Chenopodium quinoa
AUR62022855 Chenopodium quinoa
BcaB01g00058 Brassica carinata
BolC8t50736H Brassica oleracea
BraA04t16136Z Brassica rapa
BraA09t40335Z Brassica rapa
C08p31150 Brassica napus
CANSAT21G1948 Cannabis sativa
CANSAT56G1358 Cannabis sativa
CARHR165940 Cardamine hirsuta
Carub.0005s2261 Capsella rubella
Ca_05944_v3 Cicer arietinum L.
CBR_g12499 Chara braunii
CBR_g12500 Chara braunii
Cc02_g03690 Coffea canephora
Cc02_g06810 Coffea canephora
CDE08G1313 Ceratophyllum demersum
Cfa001354 Carpinus fangiana
Cfa008249 Carpinus fangiana
Ciclev10032067m.g Citrus clementina
CiPaw.01G296600 Carya illinoinensis
CiPaw.02G190700 Carya illinoinensis
CiPaw.04G064600 Carya illinoinensis
ClCG07G004050 Citrullus lanatus
COL.COLO4_25638 Corchorus olitorius
Cpa.g.sc19.204 Carica papaya
Cpa.g.sc4.178 Carica papaya
Cre12.g508700 Chlamydomonas reinhardtii
CsaV3_5G008970 Cucumis sativus L.
CSS0013577 Camellia sinensis var. sinensis
CSS0037512 Camellia sinensis var. sinensis
CSS0045025 Camellia sinensis var. sinensis
DCAR_011795 Daucus carota
DCAR_027549 Daucus carota
Dinv20964 Davidia involucrata
Dinv20979 Davidia involucrata
Dinv28516 Davidia involucrata
Dinv34414 Davidia involucrata
Duzib114G0850 Durio zibethinus
Duzib128G1461 Durio zibethinus
ECA238G4741 Erigeron canadensis
EL10Ac2g04802 Beta vulgaris
EL10Ac3g05759 Beta vulgaris
Eucgr.G03038 Eucalyptus grandis
Eucgr.K00135 Eucalyptus grandis
FAN01G2395 Fragaria x ananassa
FAN03G3166 Fragaria x ananassa
FAN03G3475 Fragaria x ananassa
FAN06G0797 Fragaria x ananassa
FAN06G1157 Fragaria x ananassa
FAN06G2762 Fragaria x ananassa
FAN06G2830 Fragaria x ananassa
FAN06G4720 Fragaria x ananassa
FAN10G1328 Fragaria x ananassa
FAN10G1948 Fragaria x ananassa
FvH4_7g24130 Fragaria vesca
FvH4_7g27500 Fragaria vesca
Glyma.02G255100 Glycine max
Glyma.09G150200 Glycine max
Glyma.14G061400 Glycine max
Glyma.16G201600 Glycine max
Gohir.A05G316100 Gossypium hirsutum
Gohir.D04G066900 Gossypium hirsutum
Gorai.012G075900 Gossypium raimondii
GSVIVG01032860001 Vitis vinifera
HanXRQChr07g0202501 Helianthus annuus
Haze_13802 Corylus avellana
Haze_17194 Corylus avellana
Hma1.2p1_0488F.1_g163830 Hydrangea macrophylla
Hma1.2p1_1409F.1_g281620 Hydrangea macrophylla
HPP92_012632 Vanilla planifolia
Hund04668 Selenicereus undatus
Hund15969 Selenicereus undatus
Lalb_Chr03g0032981 Lupinus albus
Lalb_Chr04g0250691 Lupinus albus
Lalb_Chr10g0105061 Lupinus albus
Lalb_Chr17g0346661 Lupinus albus
Lj1C951T5 Lonicera japonica
Lj2g0006173 Lotus japonicus
Lj6g0001965 Lotus japonicus
Lj8A71T56 Lonicera japonica
Lj8C71T12 Lonicera japonica
LjContig00357g0025877 Lotus japonicus
Lsat_1_v5_gn_2_121421 Lactuca sativa
Manes.06G140300 Manihot esculenta
Manes.07G126700 Manihot esculenta
Manes.10G016400 Manihot esculenta
Mapoly0006s0046 Marchantia polymorpha
MBI04_g06627_MAGBIO Magnolia biondii
MBI14_g09435_MAGBIO Magnolia biondii
MCO16G537 Micromonas commoda
MD01G1148500 Malus domestica
MD01G1191300 Malus domestica
MD07G1215500 Malus domestica
Medtr5g082110 Medicago truncatula
MELO3C034122.2 Cucumis melo
Migut.F00407 Erythranthe guttata
Migut.F01417 Erythranthe guttata
MSTRG.222 Avicennia marina
MSTRG.8317 Avicennia marina
Nn1g01150 Nelumbo nucifera
Nn2g11418 Nelumbo nucifera
Nn6g34343 Nelumbo nucifera
Oeu017569.2 Olea europaea
Oeu030154.1 Olea europaea
Os06g0705000 Oryza sativa ssp. japonica
PGR142G0530 Punica granatum
Phvul.004G124500 Phaseolus vulgaris
Phvul.008G225700 Phaseolus vulgaris
Phvul.008G225900 Phaseolus vulgaris
Potri.008G065800 Populus trichocarpa
Potri.010G191700 Populus trichocarpa
Pp3c7_11620 Physcomitrium patens
PRCOL_00003037 Prasinoderma coloniale
PRCOL_00005734 Prasinoderma coloniale
Prupe.2G247400 Prunus persica
Prupe.2G285700 Prunus persica
Psat2g034840 Pisum sativum
PSO210G5252 Papaver somniferum
QL12p039078 Quercus lobata
RcHm_v2.0_Chr1g0369551 Rosa chinensis
RcHm_v2.0_Chr1g0375981 Rosa chinensis
Rhsim03G0173500 Rhododendron simsii
Rhsim08G0206900 Rhododendron simsii
Sabra08G0048200 Salix brachista
SalBow4G1619 Salvia bowleyana
SalBow6G1828 Salvia bowleyana
Sc14g0005270 Simmondsia chinensis
Sc19g0001790 Simmondsia chinensis
Sed0020578 Sechium edule
SEGI_11650 Sequoiadendron giganteum
SEGI_16324 Sequoiadendron giganteum
SEGI_25549 Sequoiadendron giganteum
SHI03482 Sapria himalayana
SHI03483 Sapria himalayana
SMO197G0083 Selaginella moellendorffii
SMO356G0263 Selaginella moellendorffii
SMO364G0532 Selaginella moellendorffii
Sp5g06650 Schrenkiella parvula
TAR375G0673 Trochodendron aralioides
TAR633G0267 Trochodendron aralioides
THA.LOC104810061 Tarenaya hassleriana
THA.LOC104810185 Tarenaya hassleriana
THA.LOC104824308 Tarenaya hassleriana
Thecc.03G165300 Theobroma cacao
Thecc.03G165400 Theobroma cacao
Thecc.10G023400 Theobroma cacao
Thhalv10010522m.g Eutrema salsugineum
TPR.G10823 Trifolium pratense
TPR.G19864 Trifolium pratense
TWI09G1096 Tripterygium wilfordii
TWI53G0524 Tripterygium wilfordii
unitig_62.g23932 Utricularia gibba
vmacro06753 Vaccinium macrocarpon
vmacro06985 Vaccinium macrocarpon
VMungo0464G0389 Vigna mungo
VMungo0647G0453 Vigna mungo
Zm00001eb227330 Zea mays

User provided reference genes

Program Settings