Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p25370 Brassica napus
A04p34040 Brassica napus
A05p05780 Brassica napus
Aa31LG1G27240 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.907 Anthoceros agrestis
Actinidia09997 Actinidia chinensis
Ah.13g077050 Amaranthus hybridus
AL4G44990 Arabidopsis lyrata
Aqoxy7G00375 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0R79PA Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.51RIH8 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.L2MSK1 Arachis hypogaea
AT2G45790 Arabidopsis thaliana
ATR0680G146 Amborella trichopoda
Atru.chr5.444 Acer truncatum
AUR62013874 Chenopodium quinoa
AUR62036720 Chenopodium quinoa
BcaB01g03252 Brassica carinata
BcaB02g09006 Brassica carinata
BcaC01g05105 Brassica carinata
BcaC02g07054 Brassica carinata
BcaC02g12181 Brassica carinata
BolC3t15377H Brassica oleracea
BolC4t22293H Brassica oleracea
BolC4t28682H Brassica oleracea
BraA03t11743Z Brassica rapa
BraA04t18865Z Brassica rapa
BraA05t19544Z Brassica rapa
C03p30280 Brassica napus
C04p06720 Brassica napus
C04p71840 Brassica napus
CAN.G134.78 Capsicum annuum
CAN.G134.80 Capsicum annuum
CANSAT11G2537 Cannabis sativa
CANSAT25G0181 Cannabis sativa
CANSAT56G2897 Cannabis sativa
CARHR141060 Cardamine hirsuta
Carub.0004s2849 Capsella rubella
Ca_07888_v3 Cicer arietinum L.
CBR_g4022 Chara braunii
CBR_g41657 Chara braunii
CBR_g44345 Chara braunii
Cc02_g37580 Coffea canephora
CDE05G2621 Ceratophyllum demersum
CDE08G1212 Ceratophyllum demersum
Cfa003959 Carpinus fangiana
Cfa026644 Carpinus fangiana
Cfa027079 Carpinus fangiana
Ciclev10024269m.g Citrus clementina
CiPaw.01G057600 Carya illinoinensis
CiPaw.02G028200 Carya illinoinensis
ClCG03G012620 Citrullus lanatus
ClCG11G000500 Citrullus lanatus
COL.COLO4_12672 Corchorus olitorius
Cpa.g.c40434 Carica papaya
Cpa.g.c46781 Carica papaya
Cpa.g.sc170.35 Carica papaya
Cre14.g626900 Chlamydomonas reinhardtii
CsaV3_5G014110 Cucumis sativus L.
CSS0014093 Camellia sinensis var. sinensis
CSS0016921 Camellia sinensis var. sinensis
CSS0025539 Camellia sinensis var. sinensis
CSS0029944 Camellia sinensis var. sinensis
CSS0039842 Camellia sinensis var. sinensis
CSS0047600 Camellia sinensis var. sinensis
DCAR_008599 Daucus carota
Dinv32446 Davidia involucrata
Dinv43781 Davidia involucrata
Dinv43783 Davidia involucrata
Duzib133G0563 Durio zibethinus
ECA236G4925 Erigeron canadensis
EL10Ac1g02076 Beta vulgaris
EL10Ac7g16340 Beta vulgaris
Eucgr.E00182 Eucalyptus grandis
Eucgr.E00184 Eucalyptus grandis
FAN01G1997 Fragaria x ananassa
FAN03G0966 Fragaria x ananassa
FAN06G0259 Fragaria x ananassa
FAN06G0644 Fragaria x ananassa
FvH4_7g13630 Fragaria vesca
Glyma.09G262400 Glycine max
Glyma.18G229800 Glycine max
Gohir.A08G129900 Gossypium hirsutum
Gohir.A12G104900 Gossypium hirsutum
Gohir.D08G151400 Gossypium hirsutum
Gohir.D12G108800 Gossypium hirsutum
Gorai.004G157100 Gossypium raimondii
Gorai.008G117900 Gossypium raimondii
GSVIVG01026838001 Vitis vinifera
HanXRQChr04g0121661 Helianthus annuus
HanXRQChr06g0169891 Helianthus annuus
Haze_05811 Corylus avellana
Haze_05812 Corylus avellana
Haze_15453 Corylus avellana
Haze_24893 Corylus avellana
Hma1.2p1_0033F.1_g020410 Hydrangea macrophylla
HPP92_000764 Vanilla planifolia
Hund16943 Selenicereus undatus
Lalb_Chr04g0256721 Lupinus albus
Lj1g0021860 Lotus japonicus
Lj7A516T66 Lonicera japonica
Lj9A580G54 Lonicera japonica
Lsat_1_v5_gn_7_5261 Lactuca sativa
Manes.01G259900 Manihot esculenta
Manes.05G037500 Manihot esculenta
Mapoly0004s0121 Marchantia polymorpha
MBI17_g19513_MAGBIO Magnolia biondii
MBI17_g19514_MAGBIO Magnolia biondii
MBI17_g19515_MAGBIO Magnolia biondii
MBI18_g09776_MAGBIO Magnolia biondii
MCO01G022 Micromonas commoda
MD01G1053400 Malus domestica
MD07G1141700 Malus domestica
Medtr7g076670 Medicago truncatula
MELO3C026482.2 Cucumis melo
Migut.N01427 Erythranthe guttata
MSTRG.28213 Avicennia marina
MSTRG.4868 Avicennia marina
Nitab4.5_0001702g0210 Nicotiana tabacum
Nitab4.5_0010110g0030 Nicotiana tabacum
Nitab4.5_0010827g0020 Nicotiana tabacum
Nn1g01429 Nelumbo nucifera
Nn6g33536 Nelumbo nucifera
Oeu014677.1 Olea europaea
Oeu014681.1 Olea europaea
Os04g0682300 Oryza sativa ssp. japonica
Peaxi162Scf00246g01118 Petunia axillaris
Peaxi162Scf00397g00424 Petunia axillaris
PGR042G0708 Punica granatum
PGR044G0179 Punica granatum
PGR044G1122 Punica granatum
PGSC0003DMG400005806 Solanum tuberosum
PGSC0003DMG400013702 Solanum tuberosum
PGSC0003DMG400021636 Solanum tuberosum
Phvul.008G068100 Phaseolus vulgaris
Potri.014G080300 Populus trichocarpa
Potri.014G080500 Populus trichocarpa
Pp3c23_11670 Physcomitrium patens
PRCOL_00001907 Prasinoderma coloniale
Prupe.2G162400 Prunus persica
Prupe.8G033900 Prunus persica
Psat3g111000 Pisum sativum
PSO478G0134 Papaver somniferum
PSO782G3808 Papaver somniferum
QL08p049567 Quercus lobata
RcHm_v2.0_Chr1g0353671 Rosa chinensis
RcHm_v2.0_Chr1g0364561 Rosa chinensis
RcHm_v2.0_Chr4g0404481 Rosa chinensis
RcHm_v2.0_Chr5g0045001 Rosa chinensis
Rhsim07G0018200 Rhododendron simsii
RhsimUnG0002300 Rhododendron simsii
Sabra14G0058400 Salix brachista
SalBow5G4069 Salvia bowleyana
SalBow5G5099 Salvia bowleyana
Sc02g0002070 Simmondsia chinensis
Sed0025976 Sechium edule
SEGI_40114 Sequoiadendron giganteum
SGA_v2.0_scaffold11G05655 Striga asiatica
SGA_v2.0_scaffold43G16443 Striga asiatica
SHI30460 Sapria himalayana
SMO367G1007 Selaginella moellendorffii
Solyc05g046340.2 Solanum lycopersicum
Solyc05g048760.3 Solanum lycopersicum
Solyc08g008670.3 Solanum lycopersicum
Solyc08g076560.1 Solanum lycopersicum
Sopen05g027620 Solanum pennellii
Sopen05g028080 Solanum pennellii
Sopen08g004500 Solanum pennellii
Sp4g27860 Schrenkiella parvula
TAR629G2702 Trochodendron aralioides
TAR636G2570 Trochodendron aralioides
THA.LOC104817282 Tarenaya hassleriana
THA.LOC104827595 Tarenaya hassleriana
Thecc.01G363600 Theobroma cacao
Thhalv10001604m.g Eutrema salsugineum
TPR.G18261 Trifolium pratense
TPR.G40455 Trifolium pratense
TPR.G42 Trifolium pratense
TWI14G1008 Tripterygium wilfordii
TWI59G0409 Tripterygium wilfordii
TWI59G0439 Tripterygium wilfordii
TWI59G0950 Tripterygium wilfordii
unitig_22.g6808 Utricularia gibba
vmacro20957 Vaccinium macrocarpon
VMungo1383G3090 Vigna mungo
Zm00001eb065790 Zea mays

User provided reference genes

Program Settings