Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p21680 Brassica napus
A04p29630 Brassica napus
A06p28820 Brassica napus
Aa31LG5G20830 Aethionema arabicum
Actinidia04090 Actinidia chinensis
Actinidia04660 Actinidia chinensis
Actinidia21150 Actinidia chinensis
Actinidia24931 Actinidia chinensis
Ah.02g111370 Amaranthus hybridus
Ah.11g050060 Amaranthus hybridus
AL4G36150 Arabidopsis lyrata
Aqoxy2G03500 Aquilegia oxysepala
Aqoxy5G00373 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.1H3032 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.D5U6MU Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PHA4NK Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.R5NTZZ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RW1UC5 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Y88CQU Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YF2GLB Arachis hypogaea
AT2G38840 Arabidopsis thaliana
ATR0665G388 Amborella trichopoda
Atru.chr5.1552 Acer truncatum
AUR62011954 Chenopodium quinoa
AUR62021954 Chenopodium quinoa
AUR62032267 Chenopodium quinoa
BcaB01g03621 Brassica carinata
BcaC01g05515 Brassica carinata
BcaC02g07441 Brassica carinata
BolC3t14926H Brassica oleracea
BolC3t14954H Brassica oleracea
BolC4t28193H Brassica oleracea
BolC4t28312H Brassica oleracea
BolC4t28313H Brassica oleracea
BraA03t11403Z Brassica rapa
BraA04t18429Z Brassica rapa
BraA04t18522Z Brassica rapa
BraA06t25826Z Brassica rapa
C03p25320 Brassica napus
C03p25680 Brassica napus
C04p66920 Brassica napus
C04p68070 Brassica napus
C04p68080 Brassica napus
C09p47650 Brassica napus
CAN.G1488.2 Capsicum annuum
CAN.G1488.3 Capsicum annuum
CAN.G771.12 Capsicum annuum
CAN.G771.13 Capsicum annuum
CANSAT25G2047 Cannabis sativa
CARHR133570 Cardamine hirsuta
Carub.0004s2087 Capsella rubella
Ca_08640_v3 Cicer arietinum L.
CBR_g8307 Chara braunii
Cc01_g18910 Coffea canephora
CDE04G3179 Ceratophyllum demersum
CDE07G1976 Ceratophyllum demersum
Ciclev10019381m.g Citrus clementina
CiPaw.03G256800 Carya illinoinensis
ClCG09G007480 Citrullus lanatus
COL.COLO4_06092 Corchorus olitorius
Cpa.g.sc52.105 Carica papaya
Cpa.g.sc52.106 Carica papaya
Cre16.g663050 Chlamydomonas reinhardtii
CsaV3_7G027640 Cucumis sativus L.
CSS0026583 Camellia sinensis var. sinensis
DCAR_002690 Daucus carota
DCAR_018442 Daucus carota
Dinv22488 Davidia involucrata
Dinv34560 Davidia involucrata
Duzib133G0262 Durio zibethinus
Duzib138G0212 Durio zibethinus
Duzib211G0248 Durio zibethinus
ECA248G0710 Erigeron canadensis
EL10Ac5g10463 Beta vulgaris
Eucgr.B01485 Eucalyptus grandis
FAN12G4236 Fragaria x ananassa
FAN15G1876 Fragaria x ananassa
FAN20G1369 Fragaria x ananassa
FAN24G1113 Fragaria x ananassa
FAN27G2942 Fragaria x ananassa
FvH4_2g22730 Fragaria vesca
Glyma.02G143000 Glycine max
Glyma.10G031400 Glycine max
Gohir.A07G208500 Gossypium hirsutum
Gohir.A11G126500 Gossypium hirsutum
Gohir.D07G214400 Gossypium hirsutum
Gohir.D11G132000 Gossypium hirsutum
Gorai.001G242400 Gossypium raimondii
Gorai.007G141200 Gossypium raimondii
GSVIVG01000711001 Vitis vinifera
HanXRQChr01g0006891 Helianthus annuus
HanXRQChr03g0064341 Helianthus annuus
HanXRQChr04g0094761 Helianthus annuus
HanXRQChr04g0098101 Helianthus annuus
HanXRQChr06g0177911 Helianthus annuus
HanXRQChr09g0243441 Helianthus annuus
HanXRQChr11g0343431 Helianthus annuus
HanXRQChr13g0387481 Helianthus annuus
Haze_24521 Corylus avellana
Haze_24522 Corylus avellana
Hma1.2p1_0760F.1_g214220 Hydrangea macrophylla
HPP92_012304 Vanilla planifolia
Hund22719 Selenicereus undatus
Hund22720 Selenicereus undatus
Lalb_Chr01g0019921 Lupinus albus
Lalb_Chr06g0162701 Lupinus albus
Lj1g0000304 Lotus japonicus
Lj2C1161G6 Lonicera japonica
Lj5g0013019 Lotus japonicus
Lsat_1_v5_gn_5_186821 Lactuca sativa
Manes.01G202600 Manihot esculenta
Manes.05G083700 Manihot esculenta
Mapoly0093s0035 Marchantia polymorpha
MCO03G033 Micromonas commoda
MCO12G362 Micromonas commoda
MD03G1255900 Malus domestica
MD11G1276500 Malus domestica
Medtr1g070940 Medicago truncatula
Medtr7g096020 Medicago truncatula
MELO3C015756.2 Cucumis melo
Migut.D00342 Erythranthe guttata
MSTRG.18280 Avicennia marina
Nitab4.5_0000187g0140 Nicotiana tabacum
Nitab4.5_0001044g0030 Nicotiana tabacum
Nitab4.5_0003053g0040 Nicotiana tabacum
Nitab4.5_0004899g0140 Nicotiana tabacum
Nn1g02525 Nelumbo nucifera
Nn3g19352 Nelumbo nucifera
Nn6g34583 Nelumbo nucifera
Oeu011521.4 Olea europaea
Oeu025782.1 Olea europaea
Os03g0796800 Oryza sativa ssp. japonica
Os07g0181700 Oryza sativa ssp. japonica
Peaxi162Scf00049g02229 Petunia axillaris
Peaxi162Scf01311g00020 Petunia axillaris
PGR119G0829 Punica granatum
PGSC0003DMG400020060 Solanum tuberosum
Phvul.007G176200 Phaseolus vulgaris
Potri.002G046000 Populus trichocarpa
Potri.005G217300 Populus trichocarpa
Pp3c18_12950 Physcomitrium patens
Pp3c22_17680 Physcomitrium patens
Prupe.8G233000 Prunus persica
Psat3g060760 Pisum sativum
Psat6g058040 Pisum sativum
PSO210G6865 Papaver somniferum
PSO832G3077 Papaver somniferum
QL12p042578 Quercus lobata
RcHm_v2.0_Chr6g0289661 Rosa chinensis
Rhsim01G0270500 Rhododendron simsii
Rhsim13G0030400 Rhododendron simsii
Sabra02G0037000 Salix brachista
SalBow4G1850 Salvia bowleyana
Sc05g0001070 Simmondsia chinensis
Sed0021830 Sechium edule
Sed0026747 Sechium edule
SEGI_18155 Sequoiadendron giganteum
SGA_v2.0_scaffold138G35289 Striga asiatica
SHI09972 Sapria himalayana
SMO119G0123 Selaginella moellendorffii
SMO358G0641 Selaginella moellendorffii
Solyc06g084080.4 Solanum lycopersicum
Solyc09g065810.3 Solanum lycopersicum
Sopen06g035470 Solanum pennellii
Sopen09g027590 Solanum pennellii
Sp4g21230 Schrenkiella parvula
TAR362G0028 Trochodendron aralioides
TAR365G0099 Trochodendron aralioides
THA.LOC104804694 Tarenaya hassleriana
THA.LOC104824177 Tarenaya hassleriana
Thecc.01G268800 Theobroma cacao
Thhalv10016535m.g Eutrema salsugineum
TPR.G19113 Trifolium pratense
TPR.G39048 Trifolium pratense
TPR.G39077 Trifolium pratense
TWI18G1352 Tripterygium wilfordii
TWI75G1072 Tripterygium wilfordii
unitig_22.g5276 Utricularia gibba
vmacro02623 Vaccinium macrocarpon
vmacro14880 Vaccinium macrocarpon
VMungo0720G2873 Vigna mungo
Zm00001eb060800 Zea mays
Zm00001eb060850 Zea mays
Zm00001eb060900 Zea mays
Zm00001eb212950 Zea mays
Zm00001eb301480 Zea mays

User provided reference genes

Program Settings