Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p34590 Brassica napus
A06p33480 Brassica napus
Aa31LG8G15160 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.2597 Anthoceros agrestis
Actinidia18006 Actinidia chinensis
Actinidia20564 Actinidia chinensis
Ah.02g124580 Amaranthus hybridus
Ah.11g043800 Amaranthus hybridus
AL3G51020 Arabidopsis lyrata
AL6G43520 Arabidopsis lyrata
AL7G14940 Arabidopsis lyrata
AL7G20270 Arabidopsis lyrata
Aqoxy5G01038 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.50NG3N Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.I3VYS4 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.KDN8FX Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Q95X63 Arachis hypogaea
AT2G17980 Arabidopsis thaliana
AT4G31740 Arabidopsis thaliana
AT4G36100 Arabidopsis thaliana
ATR0661G017 Amborella trichopoda
Atru.chr9.527 Acer truncatum
Atru.chr9.531 Acer truncatum
AUR62012932 Chenopodium quinoa
AUR62027130 Chenopodium quinoa
AUR62034267 Chenopodium quinoa
BcaB01g00720 Brassica carinata
BcaB03g12716 Brassica carinata
BcaB07g29908 Brassica carinata
BcaB07g29909 Brassica carinata
BcaB08g34780 Brassica carinata
BcaC01g01063 Brassica carinata
BcaC01g01064 Brassica carinata
BcaC03g17368 Brassica carinata
BolC2t11383H Brassica oleracea
BolC3t21077H Brassica oleracea
BraA02t08467Z Brassica rapa
C02p53090 Brassica napus
C03p58880 Brassica napus
C03p87590 Brassica napus
CAN.G1235.1 Capsicum annuum
CANSAT25G1589 Cannabis sativa
CARHR108470 Cardamine hirsuta
CARHR239630 Cardamine hirsuta
CARHR239640 Cardamine hirsuta
CARHR286350 Cardamine hirsuta
Carub.0003s3212 Capsella rubella
Ca_18316_v3 Cicer arietinum L.
CBR_g41372 Chara braunii
Cc09_g10660 Coffea canephora
CDE04G2739 Ceratophyllum demersum
CDE07G1944 Ceratophyllum demersum
Cfa005327 Carpinus fangiana
Cfa025643 Carpinus fangiana
Ciclev10028035m.g Citrus clementina
CiPaw.05G088700 Carya illinoinensis
CiPaw.06G118100 Carya illinoinensis
ClCG02G003540 Citrullus lanatus
ClCG02G010010 Citrullus lanatus
COL.COLO4_17937 Corchorus olitorius
Cpa.g.sc20.199 Carica papaya
Cre12.g521350 Chlamydomonas reinhardtii
CsaV3_5G012530 Cucumis sativus L.
CsaV3_7G001760 Cucumis sativus L.
CSS0016232 Camellia sinensis var. sinensis
CSS0026215 Camellia sinensis var. sinensis
CSS0032013 Camellia sinensis var. sinensis
CSS0036850 Camellia sinensis var. sinensis
DCAR_006289 Daucus carota
DCAR_015668 Daucus carota
Dinv14161 Davidia involucrata
Dinv41883 Davidia involucrata
Duzib052G0095 Durio zibethinus
Duzib132G1261 Durio zibethinus
ECA232G0128 Erigeron canadensis
EL10Ac9g21259 Beta vulgaris
Eucgr.G01854 Eucalyptus grandis
FAN04G0554 Fragaria x ananassa
FAN04G0582 Fragaria x ananassa
FAN08G1272 Fragaria x ananassa
FAN15G0675 Fragaria x ananassa
FAN24G2440 Fragaria x ananassa
FAN27G2019 Fragaria x ananassa
FvH4_2g16530 Fragaria vesca
FvH4_5g21340 Fragaria vesca
FvH4_5g21350 Fragaria vesca
Glyma.05G122800 Glycine max
Glyma.08G077800 Glycine max
Gohir.A01G174400 Gossypium hirsutum
Gohir.A12G033600 Gossypium hirsutum
Gohir.D01G165600 Gossypium hirsutum
Gohir.D12G038900 Gossypium hirsutum
Gorai.002G206000 Gossypium raimondii
Gorai.008G040800 Gossypium raimondii
GSVIVG01013609001 Vitis vinifera
GSVIVG01019333001 Vitis vinifera
GSVIVG01023951001 Vitis vinifera
HanXRQChr14g0459051 Helianthus annuus
Haze_02053 Corylus avellana
Hma1.2p1_0271F.1_g108980 Hydrangea macrophylla
HPP92_008376 Vanilla planifolia
Hund28543 Selenicereus undatus
Hund28545 Selenicereus undatus
Lalb_Chr07g0189201 Lupinus albus
Lj4g0019363 Lotus japonicus
Lj5A173T63 Lonicera japonica
Lsat_1_v5_gn_1_280 Lactuca sativa
Lsat_1_v5_gn_3_116720 Lactuca sativa
Lsat_1_v5_gn_4_117161 Lactuca sativa
Lsat_1_v5_gn_9_39861 Lactuca sativa
Manes.02G063200 Manihot esculenta
Manes.02G064001 Manihot esculenta
Mapoly0007s0195 Marchantia polymorpha
MBI05_g12019_MAGBIO Magnolia biondii
MCO11G234 Micromonas commoda
MD05G1133700 Malus domestica
MD10G1138700 Malus domestica
Medtr4g094405 Medicago truncatula
Medtr8g052140 Medicago truncatula
MELO3C013262.2 Cucumis melo
MELO3C022592.2 Cucumis melo
Migut.E00721 Erythranthe guttata
MSTRG.27620 Avicennia marina
MSTRG.5469 Avicennia marina
Nitab4.5_0000783g0140 Nicotiana tabacum
Nitab4.5_0001700g0110 Nicotiana tabacum
Nitab4.5_0003828g0040 Nicotiana tabacum
Nitab4.5_0011212g0010 Nicotiana tabacum
Nn5g30948 Nelumbo nucifera
Nn6g31732 Nelumbo nucifera
Oeu021964.1 Olea europaea
Oeu062472.1 Olea europaea
Oeu062473.1 Olea europaea
Os03g0620800 Oryza sativa ssp. japonica
Peaxi162Scf00205g00012 Petunia axillaris
Peaxi162Scf00362g00220 Petunia axillaris
PGR142G4002 Punica granatum
PGSC0003DMG400014674 Solanum tuberosum
PGSC0003DMG400016827 Solanum tuberosum
Phvul.002G202700 Phaseolus vulgaris
Potri.004G204400 Populus trichocarpa
Potri.009G165300 Populus trichocarpa
Pp3c12_11250 Physcomitrium patens
Pp3c4_5220 Physcomitrium patens
PRCOL_00000573 Prasinoderma coloniale
Prupe.8G177500 Prunus persica
Psat0s3047g0120 Pisum sativum
Psat7g095320 Pisum sativum
PSO170G1984 Papaver somniferum
QL02p073794 Quercus lobata
QL11p053951 Quercus lobata
RcHm_v2.0_Chr6g0280551 Rosa chinensis
RcHm_v2.0_Chr7g0225341 Rosa chinensis
Rhsim09G0204000 Rhododendron simsii
Rhsim11G0196800 Rhododendron simsii
Sabra04G0138000 Salix brachista
Sabra09G0129300 Salix brachista
SalBow1G1498 Salvia bowleyana
Sc18g0005940 Simmondsia chinensis
Sed0014704 Sechium edule
Sed0023045 Sechium edule
SEGI_21511 Sequoiadendron giganteum
SGA_v2.0_scaffold32G13340 Striga asiatica
SHI55151 Sapria himalayana
SMO134G0246 Selaginella moellendorffii
Solyc01g112150.3 Solanum lycopersicum
Sopen01g054200 Solanum pennellii
Sopen10g027010 Solanum pennellii
Sp3g31410 Schrenkiella parvula
TAR381G0785 Trochodendron aralioides
TAR625G0891 Trochodendron aralioides
THA.LOC104807186 Tarenaya hassleriana
THA.LOC104819511 Tarenaya hassleriana
Thecc.02G045500 Theobroma cacao
Thhalv10003843m.g Eutrema salsugineum
Thhalv10022599m.g Eutrema salsugineum
TPR.G23776 Trifolium pratense
TPR.G31636 Trifolium pratense
TWI31G0731 Tripterygium wilfordii
unitig_62.g23821 Utricularia gibba
vmacro08752 Vaccinium macrocarpon
vmacro21804 Vaccinium macrocarpon
VMungo0251G1743 Vigna mungo
VMungo1215G1700 Vigna mungo
Zm00001eb027830 Zea mays
Zm00001eb190510 Zea mays

User provided reference genes

Program Settings