Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p06120 Brassica napus
Actinidia31220 Actinidia chinensis
Actinidia32678 Actinidia chinensis
Ah.14g082150 Amaranthus hybridus
Ah.16g105250 Amaranthus hybridus
AL6G37510 Arabidopsis lyrata
Aqoxy7G03846 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.3U27PV Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.6C9669 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.EDC6ME Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.K2CPZ4 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SBHH31 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WWE821 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Z43HYI Arachis hypogaea
AT5G25630 Arabidopsis thaliana
ATR0315G024 Amborella trichopoda
Atru.chr7.2161 Acer truncatum
AUR62009331 Chenopodium quinoa
AUR62010979 Chenopodium quinoa
AUR62021489 Chenopodium quinoa
AUR62023017 Chenopodium quinoa
BcaB04g19771 Brassica carinata
BcaC04g19515 Brassica carinata
BcaC04g23586 Brassica carinata
BolC9t53595H Brassica oleracea
BraA09t36253Z Brassica rapa
C09p06740 Brassica napus
CAN.G238.2 Capsicum annuum
CAN.G797.4 Capsicum annuum
CANSAT56G1603 Cannabis sativa
CANSAT56G4471 Cannabis sativa
CARHR187690 Cardamine hirsuta
Carub.0006s2350 Capsella rubella
Ca_12812_v3 Cicer arietinum L.
Ca_17333_v3 Cicer arietinum L.
CBR_g29447 Chara braunii
Cc00_g17700 Coffea canephora
Cc06_g09790 Coffea canephora
CDE02G3880 Ceratophyllum demersum
CDE04G3773 Ceratophyllum demersum
Cfa003251 Carpinus fangiana
Cfa013343 Carpinus fangiana
Ciclev10007728m.g Citrus clementina
Ciclev10007776m.g Citrus clementina
CiPaw.07G207300 Carya illinoinensis
ClCG06G008630 Citrullus lanatus
COL.COLO4_18698 Corchorus olitorius
Cpa.g.sc23.95 Carica papaya
Cpa.g.sc78.81 Carica papaya
Cpa.g.sc78.82 Carica papaya
CsaV3_1G025520 Cucumis sativus L.
CsaV3_1G025530 Cucumis sativus L.
CSS0006196 Camellia sinensis var. sinensis
CSS0016195 Camellia sinensis var. sinensis
DCAR_004497 Daucus carota
Dinv41614 Davidia involucrata
Duzib150G1680 Durio zibethinus
Duzib187G1779 Durio zibethinus
ECA234G0433 Erigeron canadensis
ECA238G3870 Erigeron canadensis
EL10Ac2g04074 Beta vulgaris
EL10Ac8g18465 Beta vulgaris
EL10Ac8g18466 Beta vulgaris
EL10Ac8g18468 Beta vulgaris
EL10Ac8g18472 Beta vulgaris
EL10Ac8g18473 Beta vulgaris
EL10Ac8g18475 Beta vulgaris
EL10Ac8g18479 Beta vulgaris
Eucgr.C02891 Eucalyptus grandis
Eucgr.C03818 Eucalyptus grandis
FAN15G3321 Fragaria x ananassa
FAN20G2410 Fragaria x ananassa
FAN23G2385 Fragaria x ananassa
FAN23G2461 Fragaria x ananassa
FAN26G3272 Fragaria x ananassa
FAN27G3406 Fragaria x ananassa
FAN28G1273 Fragaria x ananassa
FvH4_1g04540 Fragaria vesca
FvH4_2g36130 Fragaria vesca
Glyma.05G230700 Glycine max
Glyma.08G038200 Glycine max
Glyma.14G141800 Glycine max
Gohir.A06G063300 Gossypium hirsutum
Gohir.A08G250800 Gossypium hirsutum
Gohir.D06G062000 Gossypium hirsutum
Gohir.D08G272300 Gossypium hirsutum
Gorai.004G290700 Gossypium raimondii
Gorai.010G072200 Gossypium raimondii
GSVIVG01015378001 Vitis vinifera
GSVIVG01035672001 Vitis vinifera
HanXRQChr06g0180011 Helianthus annuus
Haze_21848 Corylus avellana
Haze_25759 Corylus avellana
Hma1.2p1_0140F.1_g063530 Hydrangea macrophylla
Hma1.2p1_1151F.1_g262016 Hydrangea macrophylla
Hma1.2p1_3266F.1_g334670 Hydrangea macrophylla
Hund09215 Selenicereus undatus
Lalb_Chr05g0222931 Lupinus albus
Lalb_Chr14g0362401 Lupinus albus
Lalb_Chr14g0371561 Lupinus albus
Lalb_Chr16g0388171 Lupinus albus
Lj4g0026082 Lotus japonicus
Lj7A652T76 Lonicera japonica
Lj8A603G55 Lonicera japonica
Lj8C603T16 Lonicera japonica
Lj8C603T17 Lonicera japonica
Lsat_1_v5_gn_8_95421 Lactuca sativa
Manes.03G021600 Manihot esculenta
Manes.16G066100 Manihot esculenta
MBI04_g29969_MAGBIO Magnolia biondii
MBI04_g43860_MAGBIO Magnolia biondii
MD02G1045000 Malus domestica
MD02G1045100 Malus domestica
MD08G1118600 Malus domestica
MD15G1097800 Malus domestica
MD15G1097900 Malus domestica
MD15G1183500 Malus domestica
Medtr1g008310 Medicago truncatula
Medtr8g103480 Medicago truncatula
MELO3C003585.2 Cucumis melo
MELO3C025352.2 Cucumis melo
Migut.E01508 Erythranthe guttata
Migut.J01154 Erythranthe guttata
MSTRG.14008 Avicennia marina
MSTRG.6008 Avicennia marina
Nitab4.5_0000052g0100 Nicotiana tabacum
Nitab4.5_0000114g0090 Nicotiana tabacum
Nitab4.5_0003338g0050 Nicotiana tabacum
Nitab4.5_0004562g0020 Nicotiana tabacum
Nn7g35992 Nelumbo nucifera
Nn8g39148 Nelumbo nucifera
Oeu002241.1 Olea europaea
Os01g0228400 Oryza sativa ssp. japonica
Peaxi162Scf00231g00023 Petunia axillaris
Peaxi162Scf00523g00624 Petunia axillaris
PGR044G1205 Punica granatum
PGR102G1523 Punica granatum
PGSC0003DMG400014513 Solanum tuberosum
PGSC0003DMG400024327 Solanum tuberosum
Phvul.010G165600 Phaseolus vulgaris
Potri.006G242600 Populus trichocarpa
Potri.018G037200 Populus trichocarpa
Potri.018G081700 Populus trichocarpa
Prupe.1G452700 Prunus persica
Prupe.7G232600 Prunus persica
Psat0s586g0040 Pisum sativum
Psat7g013440 Pisum sativum
PSO210G3978 Papaver somniferum
PSO210G7239 Papaver somniferum
QL02p044325 Quercus lobata
QL02p045402 Quercus lobata
QL12p026389 Quercus lobata
RcHm_v2.0_Chr2g0090251 Rosa chinensis
RcHm_v2.0_Chr6g0305741 Rosa chinensis
Rhsim01G0097100 Rhododendron simsii
Rhsim02G0182300 Rhododendron simsii
Sabra06G0189700 Salix brachista
Sabra18G0038000 Salix brachista
Sabra18G0068800 Salix brachista
Sc18g0001340 Simmondsia chinensis
Sc23g0005900 Simmondsia chinensis
Sed0002455 Sechium edule
Sed0017853 Sechium edule
Sed0019331 Sechium edule
SEGI_12691 Sequoiadendron giganteum
SGA_v2.0_scaffold163G38088 Striga asiatica
SGA_v2.0_scaffold163G38089 Striga asiatica
SMO339G0004 Selaginella moellendorffii
SMO367G0047 Selaginella moellendorffii
Solyc07g032380.4 Solanum lycopersicum
Solyc08g068230.4 Solanum lycopersicum
Sopen07g016320 Solanum pennellii
Sopen08g022090 Solanum pennellii
Sp2g21900 Schrenkiella parvula
TAR624G0021 Trochodendron aralioides
TAR624G0802 Trochodendron aralioides
THA.LOC104799204 Tarenaya hassleriana
THA.LOC104811116 Tarenaya hassleriana
Thecc.09G039700 Theobroma cacao
Thecc.09G108800 Theobroma cacao
Thhalv10003915m.g Eutrema salsugineum
TWI34G0694 Tripterygium wilfordii
TWI63G0545 Tripterygium wilfordii
vmacro20709 Vaccinium macrocarpon
VMungo0331G0581 Vigna mungo
Zm00001eb315460 Zea mays

User provided reference genes

Program Settings