Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p13760 Brassica napus
A07p20510 Brassica napus
Aa31LG9G900 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.437 Anthoceros agrestis
Actinidia16950 Actinidia chinensis
Actinidia18423 Actinidia chinensis
Actinidia35791 Actinidia chinensis
Actinidia36165 Actinidia chinensis
AL7G49000 Arabidopsis lyrata
Aqoxy3G01435 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0QF2GW Arachis hypogaea
AT5G40740 Arabidopsis thaliana
ATR0824G011 Amborella trichopoda
Atru.chr6.2486 Acer truncatum
AUR62035509 Chenopodium quinoa
AUR62036017 Chenopodium quinoa
BcaB02g07929 Brassica carinata
BcaB06g27549 Brassica carinata
BcaC05g26953 Brassica carinata
BcaC08g44481 Brassica carinata
BolC4t26356H Brassica oleracea
BolC5t31529H Brassica oleracea
BolC6t37131H Brassica oleracea
BraA04t17035Z Brassica rapa
BraA07t29742Z Brassica rapa
C04p47540 Brassica napus
C05p28020 Brassica napus
C06p19360 Brassica napus
CAN.G1057.25 Capsicum annuum
CAN.G473.58 Capsicum annuum
CANSAT64G2654 Cannabis sativa
CARHR213770 Cardamine hirsuta
Carub.0007s3474 Capsella rubella
Ca_04403_v3 Cicer arietinum L.
CBR_g66670 Chara braunii
Cc07_g00400 Coffea canephora
CDE04G2610 Ceratophyllum demersum
CDE07G0234 Ceratophyllum demersum
Cfa007279 Carpinus fangiana
Ciclev10014307m.g Citrus clementina
CiPaw.03G050400 Carya illinoinensis
CiPaw.04G033000 Carya illinoinensis
ClCG05G013220 Citrullus lanatus
COL.COLO4_29274 Corchorus olitorius
Cpa.g.sc130.41 Carica papaya
Cre17.g738500 Chlamydomonas reinhardtii
CsaV3_3G027310 Cucumis sativus L.
CSS0007013 Camellia sinensis var. sinensis
CSS0025950 Camellia sinensis var. sinensis
CSS0035050 Camellia sinensis var. sinensis
DCAR_011288 Daucus carota
DCAR_011289 Daucus carota
Dinv25694 Davidia involucrata
Dinv33384 Davidia involucrata
Duzib187G0106 Durio zibethinus
ECA238G4183 Erigeron canadensis
ECA247G3396 Erigeron canadensis
EL10Ac4g08610 Beta vulgaris
Eucgr.I01693 Eucalyptus grandis
FAN02G0756 Fragaria x ananassa
FAN02G4174 Fragaria x ananassa
FAN05G4404 Fragaria x ananassa
FAN09G4630 Fragaria x ananassa
FAN14G5093 Fragaria x ananassa
FvH4_6g52640 Fragaria vesca
Glyma.05G073400 Glycine max
Glyma.19G077600 Glycine max
Gohir.A09G033400 Gossypium hirsutum
Gohir.A10G160600 Gossypium hirsutum
Gohir.A11G065000 Gossypium hirsutum
Gohir.D09G033600 Gossypium hirsutum
Gohir.D10G085200 Gossypium hirsutum
Gohir.D11G069300 Gossypium hirsutum
Gorai.006G038600 Gossypium raimondii
Gorai.007G074100 Gossypium raimondii
Gorai.011G093100 Gossypium raimondii
GSVIVG01001851001 Vitis vinifera
HanXRQChr07g0199161 Helianthus annuus
Haze_14813 Corylus avellana
Hma1.2p1_0006F.1_g004670 Hydrangea macrophylla
Hma1.2p1_0026F.1_g016370 Hydrangea macrophylla
Hma1.2p1_0279F.1_g112260 Hydrangea macrophylla
HPP92_006269 Vanilla planifolia
Hund06716 Selenicereus undatus
Lalb_Chr02g0157941 Lupinus albus
Lalb_Chr21g0317601 Lupinus albus
Lj1g0019639 Lotus japonicus
Lj2g0006828 Lotus japonicus
Lj7A605G77 Lonicera japonica
Lsat_1_v5_gn_2_93641 Lactuca sativa
Lsat_1_v5_gn_3_79520 Lactuca sativa
Manes.15G156300 Manihot esculenta
Manes.17G107300 Manihot esculenta
Mapoly0032s0042 Marchantia polymorpha
MBI02_g11376_MAGBIO Magnolia biondii
MBI06_g35146_MAGBIO Magnolia biondii
MBI11_g11079_MAGBIO Magnolia biondii
MD09G1017400 Malus domestica
MD17G1018200 Malus domestica
Medtr6g022730 Medicago truncatula
MELO3C014854.2 Cucumis melo
Migut.H00059 Erythranthe guttata
MSTRG.3111 Avicennia marina
Nitab4.5_0000040g0490 Nicotiana tabacum
Nitab4.5_0001863g0130 Nicotiana tabacum
Nitab4.5_0008718g0020 Nicotiana tabacum
Nn3g16565 Nelumbo nucifera
Nn4g22444 Nelumbo nucifera
Oeu050433.3 Olea europaea
Oeu058755.3 Olea europaea
Os02g0329300 Oryza sativa ssp. japonica
Peaxi162Scf00080g01724 Petunia axillaris
Peaxi162Scf00420g00351 Petunia axillaris
PGR142G3554 Punica granatum
PGSC0003DMG400006971 Solanum tuberosum
PGSC0003DMG400020227 Solanum tuberosum
Phvul.004G057300 Phaseolus vulgaris
Potri.001G337600 Populus trichocarpa
Potri.001G337700 Populus trichocarpa
Pp3c13_14720 Physcomitrium patens
Pp3c13_14730 Physcomitrium patens
Pp3c3_25790 Physcomitrium patens
Pp3c4_18170 Physcomitrium patens
Prupe.3G299500 Prunus persica
Psat1g082400 Pisum sativum
PSO017G2495 Papaver somniferum
PSO478G5006 Papaver somniferum
QL02p072923 Quercus lobata
QL07p006188 Quercus lobata
QL09p045970 Quercus lobata
RcHm_v2.0_Chr2g0096321 Rosa chinensis
RcHm_v2.0_Chr2g0166591 Rosa chinensis
RcHm_v2.0_Chr2g0174171 Rosa chinensis
RcHm_v2.0_Chr5g0045391 Rosa chinensis
RcHm_v2.0_Chr6g0248711 Rosa chinensis
Rhsim08G0046300 Rhododendron simsii
Rhsim10G0011100 Rhododendron simsii
Sabra16G0218400 Salix brachista
Sabra16G0218500 Salix brachista
SalBow1G2960 Salvia bowleyana
SalBow1G7977 Salvia bowleyana
Sc03g0006880 Simmondsia chinensis
Sc03g0007020 Simmondsia chinensis
Sed0015235 Sechium edule
Sed0021158 Sechium edule
SEGI_03694 Sequoiadendron giganteum
SEGI_12803 Sequoiadendron giganteum
SEGI_13919 Sequoiadendron giganteum
SEGI_23209 Sequoiadendron giganteum
SEGI_30851 Sequoiadendron giganteum
SGA_v2.0_scaffold135G34941 Striga asiatica
SGA_v2.0_scaffold135G34947 Striga asiatica
SGA_v2.0_scaffold18G08242 Striga asiatica
SHI03860 Sapria himalayana
SMO275G0001 Selaginella moellendorffii
SMO275G0043 Selaginella moellendorffii
SMO367G0212 Selaginella moellendorffii
SMO367G0417 Selaginella moellendorffii
SMO367G0834 Selaginella moellendorffii
SMO367G0854 Selaginella moellendorffii
Solyc02g067990.3 Solanum lycopersicum
Solyc02g093810.3 Solanum lycopersicum
Sopen02g017120 Solanum pennellii
Sopen02g038450 Solanum pennellii
Sp7g01150 Schrenkiella parvula
TAR371G0788 Trochodendron aralioides
TAR374G1355 Trochodendron aralioides
TAR374G1530 Trochodendron aralioides
TAR622G1195 Trochodendron aralioides
TAR629G3339 Trochodendron aralioides
THA.LOC104805345 Tarenaya hassleriana
Thecc.04G027500 Theobroma cacao
Thhalv10027657m.g Eutrema salsugineum
TPR.G36528 Trifolium pratense
TWI12G0555 Tripterygium wilfordii
TWI36G0744 Tripterygium wilfordii
unitig_21.g20482 Utricularia gibba
unitig_744.g24365 Utricularia gibba
vmacro05923 Vaccinium macrocarpon
vmacro18313 Vaccinium macrocarpon
VMungo0133G0001 Vigna mungo
VMungo0251G3383 Vigna mungo
VMungo0464G1197 Vigna mungo
VMungo0720G1637 Vigna mungo
VMungo1127G0394 Vigna mungo
Zm00001eb235200 Zea mays

User provided reference genes

Program Settings