Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p02610 Brassica napus
Aa31LG11G15310 Aethionema arabicum
Aa31LG5G10720 Aethionema arabicum
Actinidia06002 Actinidia chinensis
Actinidia19347 Actinidia chinensis
Actinidia33092 Actinidia chinensis
Actinidia35765 Actinidia chinensis
Actinidia36107 Actinidia chinensis
Ah.06g187080 Amaranthus hybridus
AL3G10590 Arabidopsis lyrata
AL6G25290 Arabidopsis lyrata
Aqoxy1G03743 Aquilegia oxysepala
Aqoxy3G01124 Aquilegia oxysepala
Aqoxy3G02827 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.WP4DQS Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YJRC23 Arachis hypogaea
AT3G01560 Arabidopsis thaliana
AT5G14540 Arabidopsis thaliana
ATR1158G006 Amborella trichopoda
Atru.chr6.2363 Acer truncatum
Atru.chr9.2543 Acer truncatum
Atru.chr9.2544 Acer truncatum
AUR62043212 Chenopodium quinoa
BcaC09g48838 Brassica carinata
BcaNung03147 Brassica carinata
BolC2t06642H Brassica oleracea
BraA02t05229Z Brassica rapa
C02p07090 Brassica napus
CAN.G473.2 Capsicum annuum
CAN.G473.3 Capsicum annuum
CANSAT64G1511 Cannabis sativa
CANSAT80G2707 Cannabis sativa
CARHR075340 Cardamine hirsuta
CARHR198770 Cardamine hirsuta
Carub.0003s0051 Capsella rubella
Carub.0006s1272 Capsella rubella
Carub.0011s0012 Capsella rubella
Ca_04157_v3 Cicer arietinum L.
CBR_g70713 Chara braunii
Cc07_g01830 Coffea canephora
CDE06G0754 Ceratophyllum demersum
CDE07G1653 Ceratophyllum demersum
Cfa007382 Carpinus fangiana
Cfa019179 Carpinus fangiana
Ciclev10014743m.g Citrus clementina
Ciclev10019708m.g Citrus clementina
CiPaw.03G042200 Carya illinoinensis
CiPaw.04G027800 Carya illinoinensis
CiPaw.12G029200 Carya illinoinensis
COL.COLO4_05339 Corchorus olitorius
COL.COLO4_29093 Corchorus olitorius
COL.COLO4_38211 Corchorus olitorius
Cpa.g.sc108.54 Carica papaya
Cpa.g.sc35.76 Carica papaya
CSS0037811 Camellia sinensis var. sinensis
CSS0042153 Camellia sinensis var. sinensis
CSS0043829 Camellia sinensis var. sinensis
DCAR_021716 Daucus carota
Dinv33451 Davidia involucrata
Dinv35099 Davidia involucrata
Dinv38553 Davidia involucrata
Duzib147G1439 Durio zibethinus
ECA232G2741 Erigeron canadensis
ECA240G4150 Erigeron canadensis
ECA246G0141 Erigeron canadensis
EL10Ac4g08567 Beta vulgaris
Eucgr.I00119 Eucalyptus grandis
Eucgr.J02234 Eucalyptus grandis
Eucgr.K02812 Eucalyptus grandis
FAN02G4059 Fragaria x ananassa
FAN04G1021 Fragaria x ananassa
FAN05G0183 Fragaria x ananassa
FAN08G0581 Fragaria x ananassa
FAN12G0372 Fragaria x ananassa
FAN12G1559 Fragaria x ananassa
FAN13G0261 Fragaria x ananassa
FAN14G2184 Fragaria x ananassa
FAN25G3522 Fragaria x ananassa
FvH4_4g26262 Fragaria vesca
FvH4_5g05870 Fragaria vesca
FvH4_6g28150 Fragaria vesca
Glyma.05G004000 Glycine max
Glyma.19G004100 Glycine max
Gohir.A05G357400 Gossypium hirsutum
Gohir.A11G066900 Gossypium hirsutum
Gohir.D04G056700 Gossypium hirsutum
Gohir.D11G070800 Gossypium hirsutum
Gorai.007G076000 Gossypium raimondii
Gorai.012G063600 Gossypium raimondii
GSVIVG01007680001 Vitis vinifera
GSVIVG01032424001 Vitis vinifera
HanXRQChr11g0334651 Helianthus annuus
HanXRQChr16g0504641 Helianthus annuus
HanXRQChr17g0548551 Helianthus annuus
Haze_07557 Corylus avellana
Haze_14726 Corylus avellana
HPP92_020272 Vanilla planifolia
HPP92_020273 Vanilla planifolia
Hund02282 Selenicereus undatus
Lalb_Chr06g0175821 Lupinus albus
Lj2g0009789 Lotus japonicus
Lj7A598G52 Lonicera japonica
Lj9P445T42 Lonicera japonica
Lsat_1_v5_gn_0_32160 Lactuca sativa
Lsat_1_v5_gn_4_76320 Lactuca sativa
Manes.06G108400 Manihot esculenta
Manes.15G166200 Manihot esculenta
Manes.15G166300 Manihot esculenta
Mapoly0092s0027 Marchantia polymorpha
MBI10_g00728_MAGBIO Magnolia biondii
MBI10_g00729_MAGBIO Magnolia biondii
MCO04G074 Micromonas commoda
MD06G1169700 Malus domestica
MD09G1028500 Malus domestica
MD14G1175200 Malus domestica
MD17G1030000 Malus domestica
Medtr6g004930 Medicago truncatula
Medtr6g004940 Medicago truncatula
Migut.H00085 Erythranthe guttata
MSTRG.3150 Avicennia marina
MSTRG.3151 Avicennia marina
Nitab4.5_0000145g0140 Nicotiana tabacum
Nitab4.5_0000419g0090 Nicotiana tabacum
Nitab4.5_0001890g0010 Nicotiana tabacum
Nitab4.5_0002682g0050 Nicotiana tabacum
Nitab4.5_0006802g0060 Nicotiana tabacum
Oeu006814.2 Olea europaea
Oeu054618.2 Olea europaea
Oeu057059.1 Olea europaea
Os01g0169900 Oryza sativa ssp. japonica
Os05g0169400 Oryza sativa ssp. japonica
Peaxi162Scf00129g01425 Petunia axillaris
PGR044G1290 Punica granatum
PGR083G1310 Punica granatum
PGSC0003DMG400012598 Solanum tuberosum
PGSC0003DMG400028065 Solanum tuberosum
Phvul.004G007500 Phaseolus vulgaris
Potri.001G348500 Populus trichocarpa
Potri.012G083200 Populus trichocarpa
Potri.T125008 Populus trichocarpa
Pp3c11_23810 Physcomitrium patens
Pp3c24_13440 Physcomitrium patens
Pp3c7_1641 Physcomitrium patens
Pp3c8_19720 Physcomitrium patens
Prupe.1G550900 Prunus persica
Prupe.3G290000 Prunus persica
Prupe.5G168500 Prunus persica
Psat1g055600 Pisum sativum
Psat4g034520 Pisum sativum
Psat5g253560 Pisum sativum
Psat5g253600 Pisum sativum
PSO017G2107 Papaver somniferum
PSO478G2404 Papaver somniferum
QL02p075129 Quercus lobata
QL10p008427 Quercus lobata
QL10p008439 Quercus lobata
RcHm_v2.0_Chr2g0132111 Rosa chinensis
RcHm_v2.0_Chr5g0029881 Rosa chinensis
RcHm_v2.0_Chr7g0192951 Rosa chinensis
Rhsim08G0051500 Rhododendron simsii
Rhsim08G0175600 Rhododendron simsii
Sabra12G0059900 Salix brachista
Sabra16G0228100 Salix brachista
Sc03g0007570 Simmondsia chinensis
Sc12g0005110 Simmondsia chinensis
SEGI_20908 Sequoiadendron giganteum
SMO266G0040 Selaginella moellendorffii
Solyc02g086520.3 Solanum lycopersicum
Solyc12g035240.2 Solanum lycopersicum
Sopen02g031250 Solanum pennellii
Sopen12g014830 Solanum pennellii
Sp3g00490 Schrenkiella parvula
TAR374G0695 Trochodendron aralioides
TAR622G0154 Trochodendron aralioides
THA.LOC104822398 Tarenaya hassleriana
Thecc.03G023400 Theobroma cacao
Thecc.04G015600 Theobroma cacao
Thhalv10020517m.g Eutrema salsugineum
TPR.G14068 Trifolium pratense
TWI36G0939 Tripterygium wilfordii
unitig_52.g17660 Utricularia gibba
vmacro18275 Vaccinium macrocarpon
vmacro19321 Vaccinium macrocarpon
vmacro23077 Vaccinium macrocarpon
VMungo0464G0243 Vigna mungo
Zm00001eb122990 Zea mays
Zm00001eb336590 Zea mays

User provided reference genes

Program Settings