Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p33640 Brassica napus
A05p42980 Brassica napus
Aa31LG5G14940 Aethionema arabicum
Aa31LG5G20630 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.2901 Anthoceros agrestis
Actinidia34752 Actinidia chinensis
Actinidia38938 Actinidia chinensis
AL3G14510 Arabidopsis lyrata
Aqoxy2G03669 Aquilegia oxysepala
Aqoxy5G00213 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.5GL5JK Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.64W5EF Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.U10W7S Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.UY3EWL Arachis hypogaea
AT3G04500 Arabidopsis thaliana
ATR0736G218 Amborella trichopoda
Atru.chr2.953 Acer truncatum
Atru.chr2.976 Acer truncatum
Atru.chr4.2875 Acer truncatum
AUR62004836 Chenopodium quinoa
AUR62040925 Chenopodium quinoa
BcaC01g03318 Brassica carinata
BcaC01g04368 Brassica carinata
BcaC01g04372 Brassica carinata
BcaC05g29937 Brassica carinata
BcaC05g30193 Brassica carinata
BolC3t16355H Brassica oleracea
BolC3t17632H Brassica oleracea
BolC5t34928H Brassica oleracea
BraA03t12539Z Brassica rapa
BraA05t23042Z Brassica rapa
C03p40840 Brassica napus
C03p53720 Brassica napus
C05p62750 Brassica napus
CAN.G1465.9 Capsicum annuum
CANSAT54G2642 Cannabis sativa
CARHR078690 Cardamine hirsuta
CARHR219880 Cardamine hirsuta
Carub.0003s0366 Capsella rubella
Ca_10015_v3 Cicer arietinum L.
CBR_g52330 Chara braunii
Cc00_g16450 Coffea canephora
Cc02_g08860 Coffea canephora
Cc11_g04280 Coffea canephora
CDE04G2392 Ceratophyllum demersum
CDE07G1504 Ceratophyllum demersum
Cfa006347 Carpinus fangiana
Ciclev10021882m.g Citrus clementina
CiPaw.02G020400 Carya illinoinensis
ClCG06G009560 Citrullus lanatus
ClCG11G010570 Citrullus lanatus
COL.COLO4_15475 Corchorus olitorius
Cpa.g.c35686 Carica papaya
Cre02.g088800 Chlamydomonas reinhardtii
CsaV3_2G009740 Cucumis sativus L.
CSS0027708 Camellia sinensis var. sinensis
CSS0028631 Camellia sinensis var. sinensis
CSS0031912 Camellia sinensis var. sinensis
CSS0033866 Camellia sinensis var. sinensis
DCAR_009653 Daucus carota
DCAR_024364 Daucus carota
Dinv24683 Davidia involucrata
Dinv35470 Davidia involucrata
Dinv36116 Davidia involucrata
Duzib106G0879 Durio zibethinus
Duzib128G0961 Durio zibethinus
ECA238G1929 Erigeron canadensis
EL10Ac4g09010 Beta vulgaris
Eucgr.H04231 Eucalyptus grandis
FAN05G1443 Fragaria x ananassa
FAN05G3813 Fragaria x ananassa
FAN09G1189 Fragaria x ananassa
FAN14G1798 Fragaria x ananassa
FAN14G5891 Fragaria x ananassa
FvH4_5g31050 Fragaria vesca
FvH4_6g01880 Fragaria vesca
Glyma.10G166200 Glycine max
Glyma.11G011000 Glycine max
Glyma.20G223000 Glycine max
Gohir.A11G247500 Gossypium hirsutum
Gohir.A13G167400 Gossypium hirsutum
Gohir.D11G257800 Gossypium hirsutum
Gohir.D13G172900 Gossypium hirsutum
Gorai.007G276100 Gossypium raimondii
Gorai.013G187700 Gossypium raimondii
GSVIVG01016104001 Vitis vinifera
GSVIVG01023509001 Vitis vinifera
HanXRQChr04g0108621 Helianthus annuus
HanXRQChr13g0397681 Helianthus annuus
Haze_04435 Corylus avellana
Haze_26142 Corylus avellana
Hma1.2p1_1512F.1_g287960 Hydrangea macrophylla
HPP92_002516 Vanilla planifolia
HPP92_002535 Vanilla planifolia
Hund06908 Selenicereus undatus
Hund22161 Selenicereus undatus
Lalb_Chr02g0149101 Lupinus albus
Lalb_Chr02g0149111 Lupinus albus
Lalb_Chr09g0329801 Lupinus albus
Lalb_Chr16g0386451 Lupinus albus
Lj2A42G39 Lonicera japonica
Lj4g0016038 Lotus japonicus
Lj5g0022615 Lotus japonicus
Lsat_1_v5_gn_1_9200 Lactuca sativa
Lsat_1_v5_gn_2_16040 Lactuca sativa
Manes.09G148000 Manihot esculenta
Mapoly0213s0004 Marchantia polymorpha
MBI07_g16912_MAGBIO Magnolia biondii
MCO06G051 Micromonas commoda
MD04G1229900 Malus domestica
MD12G1247000 Malus domestica
MD12G1247100 Malus domestica
MD12G1247300 Malus domestica
Medtr1g080150 Medicago truncatula
MELO3C008710.2 Cucumis melo
Migut.F01271 Erythranthe guttata
Migut.I00390 Erythranthe guttata
Migut.I00391 Erythranthe guttata
MSTRG.24142 Avicennia marina
MSTRG.24694 Avicennia marina
Nitab4.5_0000687g0030 Nicotiana tabacum
Nitab4.5_0000718g0030 Nicotiana tabacum
Nitab4.5_0001372g0020 Nicotiana tabacum
Nitab4.5_0002478g0040 Nicotiana tabacum
Nitab4.5_0002915g0010 Nicotiana tabacum
Nitab4.5_0003780g0080 Nicotiana tabacum
Nitab4.5_0003780g0100 Nicotiana tabacum
Nitab4.5_0006737g0100 Nicotiana tabacum
Nitab4.5_0010738g0010 Nicotiana tabacum
Nn1g02804 Nelumbo nucifera
Nn3g19689 Nelumbo nucifera
Oeu001999.1 Olea europaea
Oeu002000.1 Olea europaea
Oeu039587.1 Olea europaea
Oeu064744.1 Olea europaea
Os02g0622500 Oryza sativa ssp. japonica
Os08g0567200 Oryza sativa ssp. japonica
Peaxi162Scf00015g00308 Petunia axillaris
Peaxi162Scf00152g00828 Petunia axillaris
Peaxi162Scf00528g00119 Petunia axillaris
PGR004G1803 Punica granatum
PGSC0003DMG400023407 Solanum tuberosum
Phvul.008G151836 Phaseolus vulgaris
Potri.013G046900 Populus trichocarpa
Potri.019G018900 Populus trichocarpa
Pp3c23_14650 Physcomitrium patens
PRCOL_00001552 Prasinoderma coloniale
Prupe.6G350000 Prunus persica
Psat6g142680 Pisum sativum
PSO210G0146 Papaver somniferum
PSO210G2652 Papaver somniferum
PSO210G7560 Papaver somniferum
PSO832G1483 Papaver somniferum
QL03p030537 Quercus lobata
RcHm_v2.0_Chr3g0449621 Rosa chinensis
Rhsim09G0137200 Rhododendron simsii
Sabra13G0042900 Salix brachista
Sc20g0000650 Simmondsia chinensis
Sed0020318 Sechium edule
SEGI_18661 Sequoiadendron giganteum
SGA_v2.0_scaffold28G12049 Striga asiatica
SMO367G0071 Selaginella moellendorffii
Solyc04g010000.3 Solanum lycopersicum
Solyc04g010040.3 Solanum lycopersicum
Solyc05g055010.4 Solanum lycopersicum
Sopen04g005130 Solanum pennellii
Sopen04g005150 Solanum pennellii
Sopen04g005170 Solanum pennellii
Sopen05g033470 Solanum pennellii
Sp3g03350 Schrenkiella parvula
TAR362G0866 Trochodendron aralioides
TAR633G1327 Trochodendron aralioides
THA.LOC104802833 Tarenaya hassleriana
THA.LOC104805782 Tarenaya hassleriana
THA.LOC104827474 Tarenaya hassleriana
Thecc.05G271100 Theobroma cacao
Thhalv10021407m.g Eutrema salsugineum
TPR.G22331 Trifolium pratense
TPR.G9915 Trifolium pratense
TWI81G0231 Tripterygium wilfordii
unitig_61.g26069 Utricularia gibba
vmacro10364 Vaccinium macrocarpon
VMungo0720G1875 Vigna mungo
Zm00001eb108490 Zea mays
Zm00001eb185100 Zea mays
Zm00001eb283270 Zea mays
Zm00001eb326740 Zea mays

User provided reference genes

Program Settings