Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p23560 Brassica napus
A09p10110 Brassica napus
Aa31LG1G14730 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.2718 Anthoceros agrestis
Actinidia17444 Actinidia chinensis
Actinidia22976 Actinidia chinensis
Actinidia30997 Actinidia chinensis
Ah.03g148760 Amaranthus hybridus
AL5G31630 Arabidopsis lyrata
AL8G45300 Arabidopsis lyrata
Aqoxy6G02292 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.3LB61T Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.CCI0LY Arachis hypogaea
AT3G51230 Arabidopsis thaliana
AT5G66230 Arabidopsis thaliana
ATR0149G006 Amborella trichopoda
Atru.chr1.3639 Acer truncatum
Atru.chr1.3640 Acer truncatum
Atru.chr1.3647 Acer truncatum
Atru.chr3.798 Acer truncatum
AUR62003369 Chenopodium quinoa
AUR62029464 Chenopodium quinoa
BcaC09g50089 Brassica carinata
BcaNung00393 Brassica carinata
BcaNung04494 Brassica carinata
BolC9t54086H Brassica oleracea
BraA01t02262Z Brassica rapa
BraA09t36654Z Brassica rapa
C01p29220 Brassica napus
C09p11980 Brassica napus
CAN.G1671.14 Capsicum annuum
CANSAT01G0038 Cannabis sativa
CARHR160810 Cardamine hirsuta
CARHR281500 Cardamine hirsuta
Carub.0005s1760 Capsella rubella
Carub.0008s2827 Capsella rubella
Ca_22374_v3 Cicer arietinum L.
Ca_25824_v3 Cicer arietinum L.
Cc07_g10720 Coffea canephora
CDE05G0776 Ceratophyllum demersum
CDE05G2608 Ceratophyllum demersum
Cfa006972 Carpinus fangiana
Ciclev10025949m.g Citrus clementina
CiPaw.07G058500 Carya illinoinensis
ClCG10G000750 Citrullus lanatus
COL.COLO4_21910 Corchorus olitorius
Cpa.g.sc6.251 Carica papaya
CsaV3_3G000800 Cucumis sativus L.
CSS0018215 Camellia sinensis var. sinensis
CSS0021991 Camellia sinensis var. sinensis
CSS0022685 Camellia sinensis var. sinensis
DCAR_016607 Daucus carota
DCAR_025998 Daucus carota
Dinv33627 Davidia involucrata
Dinv40087 Davidia involucrata
Duzib187G0981 Durio zibethinus
Duzib264G0036 Durio zibethinus
ECA232G1625 Erigeron canadensis
ECA246G1385 Erigeron canadensis
Eucgr.I02350 Eucalyptus grandis
FAN19G1818 Fragaria x ananassa
FAN23G0443 Fragaria x ananassa
FAN26G1220 Fragaria x ananassa
FAN28G1902 Fragaria x ananassa
FvH4_1g11840 Fragaria vesca
Glyma.01G166300 Glycine max
Glyma.02G048700 Glycine max
Glyma.11G077200 Glycine max
Glyma.16G128800 Glycine max
Gohir.A02G170700 Gossypium hirsutum
Gohir.A11G175400 Gossypium hirsutum
Gohir.A12G059600 Gossypium hirsutum
Gohir.D03G009400 Gossypium hirsutum
Gohir.D09G239350 Gossypium hirsutum
Gohir.D11G182900 Gossypium hirsutum
Gohir.D11G183000 Gossypium hirsutum
Gohir.D12G060000 Gossypium hirsutum
Gorai.003G009600 Gossypium raimondii
Gorai.006G262100 Gossypium raimondii
Gorai.007G194900 Gossypium raimondii
Gorai.007G195000 Gossypium raimondii
Gorai.008G063100 Gossypium raimondii
Gorai.010G060700 Gossypium raimondii
GSVIVG01018782001 Vitis vinifera
HanXRQChr09g0256601 Helianthus annuus
HanXRQChr15g0487251 Helianthus annuus
HanXRQChr16g0531461 Helianthus annuus
Haze_03763 Corylus avellana
Hma1.2p1_0258F.1_g104145 Hydrangea macrophylla
Hma1.2p1_0956F.1_g241320 Hydrangea macrophylla
HPP92_020902 Vanilla planifolia
Hund14045 Selenicereus undatus
Hund16490 Selenicereus undatus
Lalb_Chr05g0212401 Lupinus albus
Lalb_Chr09g0321731 Lupinus albus
Lj2A468T73 Lonicera japonica
Lj4A218T52 Lonicera japonica
Lj4g0000664 Lotus japonicus
Lsat_1_v5_gn_3_74521 Lactuca sativa
Lsat_1_v5_gn_4_146360 Lactuca sativa
Manes.01G145700 Manihot esculenta
Manes.02G104500 Manihot esculenta
Mapoly0004s0127 Marchantia polymorpha
MBI05_g30743_MAGBIO Magnolia biondii
MBI05_g37447_MAGBIO Magnolia biondii
MD02G1132500 Malus domestica
MD15G1246000 Malus domestica
Medtr5g022010 Medicago truncatula
Medtr8g075950 Medicago truncatula
MELO3C013767.2 Cucumis melo
Migut.H01153 Erythranthe guttata
MSTRG.2714 Avicennia marina
Nitab4.5_0000188g0110 Nicotiana tabacum
Nitab4.5_0002337g0030 Nicotiana tabacum
Nitab4.5_0003382g0020 Nicotiana tabacum
Nitab4.5_0005660g0010 Nicotiana tabacum
Nn1g05888 Nelumbo nucifera
Nn1g05889 Nelumbo nucifera
Nn1g06616 Nelumbo nucifera
Nn5g29370 Nelumbo nucifera
Nn5g30150 Nelumbo nucifera
Nn8g38913 Nelumbo nucifera
Oeu012589.1 Olea europaea
Oeu048461.1 Olea europaea
Oeu063192.2 Olea europaea
Os10g0577400 Oryza sativa ssp. japonica
Peaxi162Scf00083g00320 Petunia axillaris
PGR119G1864 Punica granatum
PGSC0003DMG400003640 Solanum tuberosum
PGSC0003DMG400023891 Solanum tuberosum
Phvul.002G108800 Phaseolus vulgaris
Phvul.003G262100 Phaseolus vulgaris
Potri.005G114100 Populus trichocarpa
Potri.007G057800 Populus trichocarpa
Prupe.7G168100 Prunus persica
Psat2g154560 Pisum sativum
Psat4g099080 Pisum sativum
PSO541G5658 Papaver somniferum
PSO675G7127 Papaver somniferum
QL06p032755 Quercus lobata
RcHm_v2.0_Chr2g0099451 Rosa chinensis
RcHm_v2.0_Chr5g0035301 Rosa chinensis
RcHm_v2.0_Chr6g0272671 Rosa chinensis
Rhsim08G0033700 Rhododendron simsii
Rhsim10G0212200 Rhododendron simsii
Sabra05G0093400 Salix brachista
SalBow3G1193 Salvia bowleyana
Sc07g0000980 Simmondsia chinensis
Sc16g0002190 Simmondsia chinensis
Sed0017342 Sechium edule
SEGI_09532 Sequoiadendron giganteum
SEGI_21114 Sequoiadendron giganteum
SEGI_23643 Sequoiadendron giganteum
SEGI_24904 Sequoiadendron giganteum
SGA_v2.0_scaffold78G25382 Striga asiatica
SHI32179 Sapria himalayana
SMO340G0107 Selaginella moellendorffii
Solyc02g030190.1 Solanum lycopersicum
Solyc02g062170.3 Solanum lycopersicum
Solyc02g083890.4 Solanum lycopersicum
Sopen02g013140 Solanum pennellii
Sopen02g028680 Solanum pennellii
Sp2g30470 Schrenkiella parvula
Sp5g10990 Schrenkiella parvula
TAR376G0994 Trochodendron aralioides
TAR381G0332 Trochodendron aralioides
TAR628G0168 Trochodendron aralioides
TAR629G3197 Trochodendron aralioides
THA.LOC104819178 Tarenaya hassleriana
Thecc.01G019000 Theobroma cacao
Thhalv10004614m.g Eutrema salsugineum
TPR.G18183 Trifolium pratense
TPR.G30058 Trifolium pratense
TWI09G1351 Tripterygium wilfordii
TWI53G0168 Tripterygium wilfordii
unitig_736.g22721 Utricularia gibba
unitig_899.g14713 Utricularia gibba
vmacro18414 Vaccinium macrocarpon
vmacro18415 Vaccinium macrocarpon
vmacro21924 Vaccinium macrocarpon
vmacro22131 Vaccinium macrocarpon
vmacro23249 Vaccinium macrocarpon
vmacro23473 Vaccinium macrocarpon
VMungo0251G0225 Vigna mungo
Zm00001eb024930 Zea mays
Zm00001eb167470 Zea mays
Zm00001eb224920 Zea mays

User provided reference genes

Program Settings