Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p46740 Brassica napus
A10p28610 Brassica napus
Aa31LG11G2260 Aethionema arabicum
Aa31LG3G18520 Aethionema arabicum
Actinidia18990 Actinidia chinensis
Actinidia31938 Actinidia chinensis
Actinidia35037 Actinidia chinensis
Ah.02g114040 Amaranthus hybridus
Ah.11g047770 Amaranthus hybridus
AL6G18360 Arabidopsis lyrata
AL8G37700 Arabidopsis lyrata
Aqoxy1G00151 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.03S8MC Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.N0JE3Z Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.R6LVKU Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SKH1UB Arachis hypogaea
AT5G08010 Arabidopsis thaliana
AT5G61040 Arabidopsis thaliana
ATR0177G058 Amborella trichopoda
Atru.chr11.1624 Acer truncatum
Atru.chr9.577 Acer truncatum
AUR62008531 Chenopodium quinoa
AUR62021559 Chenopodium quinoa
BcaB07g34223 Brassica carinata
BcaB08g37298 Brassica carinata
BcaB08g37300 Brassica carinata
BcaC06g33181 Brassica carinata
BolC7t45002H Brassica oleracea
BolC9t59636H Brassica oleracea
BraA03t13796Z Brassica rapa
BraA10t44910Z Brassica rapa
C07p44780 Brassica napus
C09p68900 Brassica napus
CAN.G1228.24 Capsicum annuum
CAN.G1228.26 Capsicum annuum
CANSAT39G0004 Cannabis sativa
CANSAT80G1081 Cannabis sativa
CARHR205170 Cardamine hirsuta
CARHR274750 Cardamine hirsuta
Carub.0006s0690 Capsella rubella
Carub.0008s2173 Capsella rubella
Ca_14345_v3 Cicer arietinum L.
Cc00_g14840 Coffea canephora
Cc11_g11950 Coffea canephora
CDE04G0191 Ceratophyllum demersum
CDE07G1307 Ceratophyllum demersum
Cfa019341 Carpinus fangiana
Ciclev10019089m.g Citrus clementina
Ciclev10033781m.g Citrus clementina
CiPaw.05G125000 Carya illinoinensis
CiPaw.11G053900 Carya illinoinensis
CiPaw.12G008500 Carya illinoinensis
ClCG04G011810 Citrullus lanatus
ClCG06G015630 Citrullus lanatus
COL.COLO4_06856 Corchorus olitorius
Cpa.g.sc1.126 Carica papaya
Cpa.g.sc94.57 Carica papaya
CsaV3_1G002930 Cucumis sativus L.
CsaV3_1G005970 Cucumis sativus L.
CSS0005049 Camellia sinensis var. sinensis
CSS0037619 Camellia sinensis var. sinensis
DCAR_023172 Daucus carota
Dinv17414 Davidia involucrata
Dinv22781 Davidia involucrata
Dinv34068 Davidia involucrata
Duzib084G0362 Durio zibethinus
Duzib205G1655 Durio zibethinus
ECA232G2426 Erigeron canadensis
EL10Ac5g11131 Beta vulgaris
Eucgr.B00592 Eucalyptus grandis
Eucgr.B03149 Eucalyptus grandis
FAN08G3423 Fragaria x ananassa
FAN13G1740 Fragaria x ananassa
FAN18G3332 Fragaria x ananassa
FvH4_5g13830 Fragaria vesca
Glyma.04G162600 Glycine max
Glyma.05G021000 Glycine max
Glyma.06G203700 Glycine max
Gohir.A07G068500 Gossypium hirsutum
Gohir.A12G182700 Gossypium hirsutum
Gohir.D07G073000 Gossypium hirsutum
Gohir.D12G185800 Gossypium hirsutum
Gorai.001G077200 Gossypium raimondii
Gorai.008G199200 Gossypium raimondii
GSVIVG01007866001 Vitis vinifera
GSVIVG01012221001 Vitis vinifera
HanXRQChr09g0270231 Helianthus annuus
HanXRQChr12g0363081 Helianthus annuus
HanXRQChr16g0502451 Helianthus annuus
Haze_07732 Corylus avellana
Haze_11907 Corylus avellana
Hma1.2p1_0060F.1_g033090 Hydrangea macrophylla
HPP92_000460 Vanilla planifolia
HPP92_007830 Vanilla planifolia
Hund02585 Selenicereus undatus
Hund09914 Selenicereus undatus
Lalb_Chr07g0178301 Lupinus albus
Lalb_Chr13g0302861 Lupinus albus
Lj1g0027425 Lotus japonicus
Lj4g0018287 Lotus japonicus
Lj5A435T21 Lonicera japonica
Lj5C102T25 Lonicera japonica
Lsat_1_v5_gn_4_111040 Lactuca sativa
Lsat_1_v5_gn_8_46340 Lactuca sativa
Manes.01G028000 Manihot esculenta
Manes.06G084700 Manihot esculenta
Manes.14G085800 Manihot esculenta
MBI16_g36263_MAGBIO Magnolia biondii
MBI16_g38067_MAGBIO Magnolia biondii
MD00G1005400 Malus domestica
MD14G1212000 Malus domestica
Medtr3g025870 Medicago truncatula
MELO3C002028.2 Cucumis melo
MELO3C017225.2 Cucumis melo
Migut.D01656 Erythranthe guttata
Migut.L01189 Erythranthe guttata
MSTRG.22965 Avicennia marina
MSTRG.7745 Avicennia marina
Nitab4.5_0000231g0260 Nicotiana tabacum
Nitab4.5_0001485g0140 Nicotiana tabacum
Nitab4.5_0009401g0050 Nicotiana tabacum
Nitab4.5_0009585g0010 Nicotiana tabacum
Nn3g17451 Nelumbo nucifera
Nn4g23428 Nelumbo nucifera
Oeu004585.2 Olea europaea
Oeu044870.1 Olea europaea
Oeu061164.2 Olea europaea
Os12g0576300 Oryza sativa ssp. japonica
Peaxi162Scf00175g00022 Petunia axillaris
Peaxi162Scf00201g00329 Petunia axillaris
PGR083G2392 Punica granatum
PGR102G2240 Punica granatum
PGSC0003DMG400024637 Solanum tuberosum
PGSC0003DMG400028369 Solanum tuberosum
Phvul.003G184800 Phaseolus vulgaris
Phvul.010G007200 Phaseolus vulgaris
Potri.008G096100 Populus trichocarpa
Potri.015G057600 Populus trichocarpa
Prupe.5G205200 Prunus persica
Psat2g037720 Pisum sativum
PSO017G3206 Papaver somniferum
PSO478G1233 Papaver somniferum
QL03p074101 Quercus lobata
QL03p074186 Quercus lobata
QL10p019524 Quercus lobata
RcHm_v2.0_Chr7g0183101 Rosa chinensis
Rhsim12G0074700 Rhododendron simsii
Rhsim12G0075200 Rhododendron simsii
Rhsim12G0148200 Rhododendron simsii
Sabra08G0072400 Salix brachista
Sabra15G0083600 Salix brachista
SalBow2G2767 Salvia bowleyana
SalBow7G3172 Salvia bowleyana
Sc12g0007260 Simmondsia chinensis
Sed0002350 Sechium edule
Sed0025785 Sechium edule
SEGI_10408 Sequoiadendron giganteum
SEGI_35614 Sequoiadendron giganteum
SGA_v2.0_scaffold25G10960 Striga asiatica
SGA_v2.0_scaffold36G14460 Striga asiatica
Solyc03g115100.4 Solanum lycopersicum
Solyc05g012230.4 Solanum lycopersicum
Sopen03g034170 Solanum pennellii
Sopen05g007060 Solanum pennellii
Sp2g24340 Schrenkiella parvula
Sp6g34930 Schrenkiella parvula
TAR265G0001 Trochodendron aralioides
TAR629G0952 Trochodendron aralioides
TAR629G1848 Trochodendron aralioides
THA.LOC104819401 Tarenaya hassleriana
Thecc.03G101900 Theobroma cacao
Thhalv10003875m.g Eutrema salsugineum
Thhalv10013089m.g Eutrema salsugineum
TPR.G12189 Trifolium pratense
TWI15G0151 Tripterygium wilfordii
TWI60G1197 Tripterygium wilfordii
TWI81G0716 Tripterygium wilfordii
unitig_749.g13432 Utricularia gibba
vmacro01315 Vaccinium macrocarpon
vmacro16495 Vaccinium macrocarpon
VMungo0331G1159 Vigna mungo
VMungo1215G2632 Vigna mungo
VMungo1215G3071 Vigna mungo
Zm00001eb029540 Zea mays
Zm00001eb136280 Zea mays
Zm00001eb227520 Zea mays
Zm00001eb283210 Zea mays

User provided reference genes

Program Settings