Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p22680 Brassica napus
A06p12380 Brassica napus
A07p27230 Brassica napus
A07p44350 Brassica napus
Aa31LG4G1790 Aethionema arabicum
Aa31LG7G1000 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.2139 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.5346 Anthoceros agrestis
Actinidia12766 Actinidia chinensis
Ah.10g033690 Amaranthus hybridus
AL1G28600 Arabidopsis lyrata
AL2G39700 Arabidopsis lyrata
Aqoxy1G01484 Aquilegia oxysepala
Aqoxy1G03000 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.36F1KB Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YZ7E83 Arachis hypogaea
AT1G16460 Arabidopsis thaliana
AT1G79230 Arabidopsis thaliana
ATR0763G120 Amborella trichopoda
AUR62037644 Chenopodium quinoa
AUR62039184 Chenopodium quinoa
BcaB02g06624 Brassica carinata
BcaB02g07206 Brassica carinata
BcaB05g25180 Brassica carinata
BcaC01g00674 Brassica carinata
BcaC02g07679 Brassica carinata
BcaC03g15876 Brassica carinata
BcaC04g18607 Brassica carinata
BcaC05g25571 Brassica carinata
BcaC05g28269 Brassica carinata
BcaC06g34801 Brassica carinata
BcaC08g45368 Brassica carinata
BcaC08g47490 Brassica carinata
BolC1t01654H Brassica oleracea
BolC5t30186H Brassica oleracea
BolC6t38160H Brassica oleracea
BolC6t39098H Brassica oleracea
BolC6t40330H Brassica oleracea
BolC7t42971H Brassica oleracea
BolC9t58925H Brassica oleracea
BraA06t24401Z Brassica rapa
BraA07t30367Z Brassica rapa
BraA07t31943Z Brassica rapa
C01p17180 Brassica napus
C02p36310 Brassica napus
C03p82980 Brassica napus
C05p14650 Brassica napus
C06p30000 Brassica napus
C06p40160 Brassica napus
C06p53140 Brassica napus
CAN.G891.1 Capsicum annuum
CAN.G943.51 Capsicum annuum
CANSAT80G2697 Cannabis sativa
CARHR016930 Cardamine hirsuta
CARHR072860 Cardamine hirsuta
Carub.0001s1620 Capsella rubella
Carub.0002s2610 Capsella rubella
Ca_03600_v3 Cicer arietinum L.
CBR_g17038 Chara braunii
Cc05_g16310 Coffea canephora
CDE02G0962 Ceratophyllum demersum
CDE06G0877 Ceratophyllum demersum
CDE06G0983 Ceratophyllum demersum
CDE06G2006 Ceratophyllum demersum
Cfa022976 Carpinus fangiana
Cfa026738 Carpinus fangiana
Ciclev10005196m.g Citrus clementina
CiPaw.11G061900 Carya illinoinensis
ClCG05G009800 Citrullus lanatus
COL.COLO4_32264 Corchorus olitorius
Cpa.g.sc34.16 Carica papaya
Cpa.g.sc34.17 Carica papaya
Cre01.g008891 Chlamydomonas reinhardtii
Cre13.g607050 Chlamydomonas reinhardtii
CsaV3_3G018980 Cucumis sativus L.
CSS0006756 Camellia sinensis var. sinensis
DCAR_016837 Daucus carota
DCAR_019919 Daucus carota
Dinv19592 Davidia involucrata
Duzib187G0441 Durio zibethinus
Duzib213G1009 Durio zibethinus
ECA236G3562 Erigeron canadensis
EL10Ac2g03264 Beta vulgaris
Eucgr.F04458 Eucalyptus grandis
FAN11G2825 Fragaria x ananassa
FAN16G2550 Fragaria x ananassa
FAN21G1395 Fragaria x ananassa
FAN25G1710 Fragaria x ananassa
FvH4_3g14990 Fragaria vesca
Glyma.08G167100 Glycine max
Glyma.15G260300 Glycine max
Gohir.A13G123400 Gossypium hirsutum
Gohir.D13G127300 Gossypium hirsutum
Gorai.013G142500 Gossypium raimondii
GSVIVG01036786001 Vitis vinifera
HanXRQChr11g0335601 Helianthus annuus
Haze_07818 Corylus avellana
Hma1.2p1_0151F.1_g067325 Hydrangea macrophylla
Hma1.2p1_0269F.1_g107810 Hydrangea macrophylla
HPP92_013192 Vanilla planifolia
HPP92_013209 Vanilla planifolia
Hund20101 Selenicereus undatus
Lalb_Chr25g0284691 Lupinus albus
Lj2A15G76 Lonicera japonica
Lj3g0014239 Lotus japonicus
Lsat_1_v5_gn_4_93521 Lactuca sativa
Lsat_1_v5_gn_7_110680 Lactuca sativa
Lsat_1_v5_gn_8_160501 Lactuca sativa
Manes.06G175700 Manihot esculenta
Manes.14G010300 Manihot esculenta
Mapoly0032s0014 Marchantia polymorpha
Mapoly0058s0078 Marchantia polymorpha
MBI02_g18168_MAGBIO Magnolia biondii
MCO09G588 Micromonas commoda
MD05G1228000 Malus domestica
MD05G1228600 Malus domestica
MD05G1228700 Malus domestica
MD10G1208500 Malus domestica
Medtr2g067080 Medicago truncatula
MELO3C019489.2 Cucumis melo
Migut.H01671 Erythranthe guttata
MSTRG.14566 Avicennia marina
MSTRG.7076 Avicennia marina
Nitab4.5_0000029g0340 Nicotiana tabacum
Nitab4.5_0000388g0140 Nicotiana tabacum
Nitab4.5_0005765g0040 Nicotiana tabacum
Nitab4.5_0006241g0010 Nicotiana tabacum
Nn7g37780 Nelumbo nucifera
Oeu002796.1 Olea europaea
Oeu010650.2 Olea europaea
Oeu020956.1 Olea europaea
Oeu034061.1 Olea europaea
Oeu043724.2 Olea europaea
Os02g0167100 Oryza sativa ssp. japonica
Os12g0608600 Oryza sativa ssp. japonica
Peaxi162Scf00006g00159 Petunia axillaris
Peaxi162Scf00452g00333 Petunia axillaris
PGR031G1669 Punica granatum
PGSC0003DMG400022232 Solanum tuberosum
Phvul.005G050400 Phaseolus vulgaris
Potri.005G095300 Populus trichocarpa
Potri.007G069300 Populus trichocarpa
Pp3c9_17670 Physcomitrium patens
PRCOL_00006295 Prasinoderma coloniale
Prupe.4G134300 Prunus persica
Psat1g013760 Pisum sativum
PSO541G1524 Papaver somniferum
PSO675G6901 Papaver somniferum
QL04p088520 Quercus lobata
QL04p088965 Quercus lobata
QL04p088979 Quercus lobata
RcHm_v2.0_Chr5g0024611 Rosa chinensis
RcHm_v2.0_Chr5g0024731 Rosa chinensis
Rhsim05G0210500 Rhododendron simsii
Rhsim06G0242300 Rhododendron simsii
Sabra05G0078800 Salix brachista
Sabra07G0056700 Salix brachista
Sc06g0002800 Simmondsia chinensis
Sed0012107 Sechium edule
SEGI_21826 Sequoiadendron giganteum
SGA_v2.0_scaffold186G40197 Striga asiatica
SGA_v2.0_scaffold49G18190 Striga asiatica
SMO119G0061 Selaginella moellendorffii
Solyc02g078990.4 Solanum lycopersicum
Solyc06g009850.3 Solanum lycopersicum
Solyc06g009860.1 Solanum lycopersicum
Solyc07g066580.3 Solanum lycopersicum
Sopen02g023800 Solanum pennellii
Sopen06g004510 Solanum pennellii
Sopen07g034740 Solanum pennellii
Sp1g14610 Schrenkiella parvula
Sp5g34280 Schrenkiella parvula
TAR583G0001 Trochodendron aralioides
THA.LOC104812362 Tarenaya hassleriana
THA.LOC104813608 Tarenaya hassleriana
Thecc.07G180400 Theobroma cacao
Thhalv10007910m.g Eutrema salsugineum
Thhalv10018699m.g Eutrema salsugineum
TPR.G33813 Trifolium pratense
TWI38G1711 Tripterygium wilfordii
TWI39G0091 Tripterygium wilfordii
unitig_578.g16333 Utricularia gibba
unitig_8.g4750 Utricularia gibba
vmacro11699 Vaccinium macrocarpon
VMungo1080G1660 Vigna mungo
Zm00001eb031400 Zea mays
Zm00001eb207410 Zea mays

User provided reference genes

Program Settings