Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p26380 Brassica napus
A07p18960 Brassica napus
Aa31LG5G7830 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.1231 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.3586 Anthoceros agrestis
Actinidia07137 Actinidia chinensis
Actinidia12926 Actinidia chinensis
Actinidia13994 Actinidia chinensis
Actinidia13995 Actinidia chinensis
Actinidia24103 Actinidia chinensis
Ah.12g061180 Amaranthus hybridus
AL4G21640 Arabidopsis lyrata
Aqoxy4G03025 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.3H693L Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.567MYZ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.B5LWM3 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.IYQC31 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RTB9TW Arachis hypogaea
AT2G28390 Arabidopsis thaliana
ATR0033G036 Amborella trichopoda
Atru.chr3.3619 Acer truncatum
Atru.chr3.3622 Acer truncatum
AUR62020295 Chenopodium quinoa
AUR62037705 Chenopodium quinoa
BcaB01g03101 Brassica carinata
BcaB06g25420 Brassica carinata
BcaB06g25423 Brassica carinata
BcaC01g04965 Brassica carinata
BolC3t15507H Brassica oleracea
BolC4t23802H Brassica oleracea
BolC4t27275H Brassica oleracea
BraA03t11853Z Brassica rapa
BraA04t17717Z Brassica rapa
BraA07t29601Z Brassica rapa
C03p31650 Brassica napus
C04p23090 Brassica napus
C04p57550 Brassica napus
CAN.G479.67 Capsicum annuum
CANSAT54G1114 Cannabis sativa
CARHR121340 Cardamine hirsuta
Carub.0004s0931 Capsella rubella
Ca_01409_v3 Cicer arietinum L.
Ca_19262_v3 Cicer arietinum L.
Ca_23093_v3 Cicer arietinum L.
Cc00_g12880 Coffea canephora
CDE02G0373 Ceratophyllum demersum
CDE02G1163 Ceratophyllum demersum
CDE08G0353 Ceratophyllum demersum
CDE08G1291 Ceratophyllum demersum
Cfa011312 Carpinus fangiana
Cfa025752 Carpinus fangiana
Ciclev10028088m.g Citrus clementina
CiPaw.13G113600 Carya illinoinensis
CiPaw.14G080900 Carya illinoinensis
ClCG01G013730 Citrullus lanatus
COL.COLO4_18330 Corchorus olitorius
Cpa.g.sc216.2 Carica papaya
Cre03.g154500 Chlamydomonas reinhardtii
CsaV3_1G014040 Cucumis sativus L.
CSS0007464 Camellia sinensis var. sinensis
CSS0036787 Camellia sinensis var. sinensis
DCAR_006064 Daucus carota
Dinv09884 Davidia involucrata
Dinv32740 Davidia involucrata
Duzib084G1104 Durio zibethinus
Duzib168G1080 Durio zibethinus
Duzib170G0108 Durio zibethinus
Duzib235G1059 Durio zibethinus
ECA238G1380 Erigeron canadensis
ECA248G0778 Erigeron canadensis
EL10Ac2g02422 Beta vulgaris
Eucgr.B02502 Eucalyptus grandis
FAN11G0686 Fragaria x ananassa
FAN16G1206 Fragaria x ananassa
FAN21G1776 Fragaria x ananassa
FAN25G3303 Fragaria x ananassa
FvH4_3g32210 Fragaria vesca
Glyma.11G146000 Glycine max
Glyma.12G172200 Glycine max
Glyma.13G325700 Glycine max
Gohir.A03G033500 Gossypium hirsutum
Gohir.A05G103400 Gossypium hirsutum
Gohir.A08G198200 Gossypium hirsutum
Gohir.D03G134800 Gossypium hirsutum
Gohir.D05G103100 Gossypium hirsutum
Gohir.D08G215600 Gossypium hirsutum
Gorai.003G141900 Gossypium raimondii
Gorai.004G229200 Gossypium raimondii
Gorai.009G107400 Gossypium raimondii
GSVIVG01025191001 Vitis vinifera
HanXRQChr01g0019371 Helianthus annuus
HanXRQChr04g0103101 Helianthus annuus
HanXRQChr06g0179151 Helianthus annuus
HanXRQChr14g0452781 Helianthus annuus
Haze_23819 Corylus avellana
Hma1.2p1_0058F.1_g032480 Hydrangea macrophylla
HPP92_006598 Vanilla planifolia
Hund03712 Selenicereus undatus
Lalb_Chr08g0240531 Lupinus albus
Lalb_Chr19g0137231 Lupinus albus
Lalb_Chr22g0350251 Lupinus albus
Lalb_Chr22g0350671 Lupinus albus
Lalb_Chr24g0394651 Lupinus albus
Lj2C1027G11 Lonicera japonica
Lj3g0004290 Lotus japonicus
Lj3g0015527 Lotus japonicus
Lsat_1_v5_gn_1_64201 Lactuca sativa
Lsat_1_v5_gn_2_100120 Lactuca sativa
Lsat_1_v5_gn_6_39960 Lactuca sativa
Lsat_1_v5_gn_6_45780 Lactuca sativa
Lsat_1_v5_gn_6_80301 Lactuca sativa
Lsat_1_v5_gn_8_29480 Lactuca sativa
Lsat_1_v5_gn_8_31621 Lactuca sativa
Manes.11G145800 Manihot esculenta
Mapoly0115s0070 Marchantia polymorpha
MBI05_g08786_MAGBIO Magnolia biondii
MCO05G084 Micromonas commoda
MD03G1118200 Malus domestica
MD11G1136600 Malus domestica
Medtr2g094470 Medicago truncatula
Medtr4g059000 Medicago truncatula
MELO3C004874.2 Cucumis melo
Migut.D02227 Erythranthe guttata
MSTRG.18661 Avicennia marina
Nitab4.5_0001195g0040 Nicotiana tabacum
Nitab4.5_0001211g0250 Nicotiana tabacum
Nitab4.5_0001997g0130 Nicotiana tabacum
Nitab4.5_0005900g0050 Nicotiana tabacum
Nn2g12882 Nelumbo nucifera
Oeu002465.1 Olea europaea
Oeu030188.3 Olea europaea
Os01g0976000 Oryza sativa ssp. japonica
Peaxi162Scf00106g00431 Petunia axillaris
Peaxi162Scf00274g00347 Petunia axillaris
PGR102G1414 Punica granatum
PGR119G2069 Punica granatum
PGSC0003DMG400019504 Solanum tuberosum
Phvul.005G134800 Phaseolus vulgaris
Phvul.011G079600 Phaseolus vulgaris
Potri.004G211200 Populus trichocarpa
Potri.009G014400 Populus trichocarpa
Pp3c10_13820 Physcomitrium patens
Pp3c3_30360 Physcomitrium patens
Prupe.6G102100 Prunus persica
Psat0s134g0040 Pisum sativum
Psat5g278960 Pisum sativum
PSO339G3164 Papaver somniferum
PSO384G0045 Papaver somniferum
QL01p022122 Quercus lobata
RcHm_v2.0_Chr5g0058821 Rosa chinensis
Sabra04G0142700 Salix brachista
Sabra09G0007600 Salix brachista
SalBow3G4611 Salvia bowleyana
Sc06g0010260 Simmondsia chinensis
Sed0022671 Sechium edule
SEGI_12034 Sequoiadendron giganteum
SEGI_16973 Sequoiadendron giganteum
SGA_v2.0_scaffold61G21127 Striga asiatica
SGA_v2.0_scaffold97G29239 Striga asiatica
SHI09315 Sapria himalayana
SHI09316 Sapria himalayana
SHI09317 Sapria himalayana
SHI09319 Sapria himalayana
SHI09320 Sapria himalayana
SMO356G0046 Selaginella moellendorffii
Solyc03g115810.3 Solanum lycopersicum
Sopen03g034790 Solanum pennellii
Sp4g11190 Schrenkiella parvula
TAR369G0153 Trochodendron aralioides
TAR623G1097 Trochodendron aralioides
THA.LOC104815747 Tarenaya hassleriana
THA.LOC104826364 Tarenaya hassleriana
Thecc.09G341400 Theobroma cacao
Thhalv10016386m.g Eutrema salsugineum
TPR.G11547 Trifolium pratense
TPR.G15544 Trifolium pratense
TPR.G35439 Trifolium pratense
TWI31G1339 Tripterygium wilfordii
TWI79G0002 Tripterygium wilfordii
unitig_899.g14918 Utricularia gibba
vmacro03198 Vaccinium macrocarpon
VMungo0225G0001 Vigna mungo
VMungo0331G1420 Vigna mungo
VMungo1074G0001 Vigna mungo
VMungo1080G0406 Vigna mungo
VMungo1127G1530 Vigna mungo
Zm00001eb139700 Zea mays

User provided reference genes

Program Settings