Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p47480 Brassica napus
A10p02480 Brassica napus
Aa31LG1G20850 Aethionema arabicum
Aa31LG5G3190 Aethionema arabicum
Actinidia00228 Actinidia chinensis
Actinidia10645 Actinidia chinensis
Actinidia17788 Actinidia chinensis
Actinidia39065 Actinidia chinensis
Ah.05g167970 Amaranthus hybridus
AL1G13580 Arabidopsis lyrata
AL1G64620 Arabidopsis lyrata
AL7G25630 Arabidopsis lyrata
AL8G15970 Arabidopsis lyrata
AL8G18130 Arabidopsis lyrata
arahy.Tifrunner.gnm1.ann1.53DGJE Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.A7US25 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.G5ZZFA Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.IFT9HD Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RT05XZ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.S6MTJ1 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.U157SK Arachis hypogaea
AT1G03970 Arabidopsis thaliana
AT5G44080 Arabidopsis thaliana
Atru.chr13.2097 Acer truncatum
Atru.chr3.87 Acer truncatum
Atru.chr6.996 Acer truncatum
AUR62013594 Chenopodium quinoa
AUR62026695 Chenopodium quinoa
BcaC05g24480 Brassica carinata
BcaC06g31656 Brassica carinata
BcaC06g34596 Brassica carinata
BolC5t29007H Brassica oleracea
BolC7t43199H Brassica oleracea
BraA06t27617Z Brassica rapa
BraA10t42515Z Brassica rapa
C05p02290 Brassica napus
C07p26710 Brassica napus
CAN.G675.1 Capsicum annuum
CANSAT25G1346 Cannabis sativa
CARHR003320 Cardamine hirsuta
CARHR179200 Cardamine hirsuta
CARHR284760 Cardamine hirsuta
Carub.0001s0312 Capsella rubella
Carub.0008s0445 Capsella rubella
Ca_10678_v3 Cicer arietinum L.
Ca_18319_v3 Cicer arietinum L.
Cc10_g14440 Coffea canephora
Cfa005557 Carpinus fangiana
Ciclev10002029m.g Citrus clementina
Ciclev10002059m.g Citrus clementina
CiPaw.15G015700 Carya illinoinensis
ClCG08G007040 Citrullus lanatus
ClCG09G010160 Citrullus lanatus
COL.COLO4_29845 Corchorus olitorius
Cpa.g.sc21.207 Carica papaya
CsaV3_6G005170 Cucumis sativus L.
CsaV3_6G037310 Cucumis sativus L.
CSS0008087 Camellia sinensis var. sinensis
CSS0026967 Camellia sinensis var. sinensis
CSS0036560 Camellia sinensis var. sinensis
DCAR_001141 Daucus carota
DCAR_021825 Daucus carota
DCAR_031451 Daucus carota
Dinv25872 Davidia involucrata
Duzib041G0494 Durio zibethinus
Duzib116G0254 Durio zibethinus
Duzib132G1178 Durio zibethinus
Duzib268G0888 Durio zibethinus
ECA232G3156 Erigeron canadensis
EL10Ac1g01559 Beta vulgaris
Eucgr.G00615 Eucalyptus grandis
FAN04G0534 Fragaria x ananassa
FAN08G0606 Fragaria x ananassa
FAN15G1672 Fragaria x ananassa
FAN18G2222 Fragaria x ananassa
FAN20G2278 Fragaria x ananassa
FAN24G2558 Fragaria x ananassa
FAN27G2664 Fragaria x ananassa
FvH4_2g13640 Fragaria vesca
FvH4_5g30210 Fragaria vesca
Glyma.08G077400 Glycine max
Glyma.10G223800 Glycine max
Glyma.20G168102 Glycine max
Gohir.A02G063700 Gossypium hirsutum
Gohir.D02G069300 Gossypium hirsutum
Gorai.005G078500 Gossypium raimondii
GSVIVG01029696001 Vitis vinifera
GSVIVG01034540001 Vitis vinifera
HanXRQChr11g0320331 Helianthus annuus
HanXRQChr11g0337451 Helianthus annuus
Haze_01603 Corylus avellana
Haze_17759 Corylus avellana
Hma1.2p1_0299F.1_g117790 Hydrangea macrophylla
HPP92_025029 Vanilla planifolia
Hund17442 Selenicereus undatus
Hund26693 Selenicereus undatus
Lalb_Chr06g0161641 Lupinus albus
Lalb_Chr07g0189281 Lupinus albus
Lalb_Chr21g0305521 Lupinus albus
Lj3g0019068 Lotus japonicus
Lj5g0017671 Lotus japonicus
Lj6g0000417 Lotus japonicus
Lj7A374G24 Lonicera japonica
Lj9C313T3 Lonicera japonica
Lsat_1_v5_gn_7_79540 Lactuca sativa
Lsat_1_v5_gn_9_40961 Lactuca sativa
Manes.02G180200 Manihot esculenta
Manes.04G058300 Manihot esculenta
Manes.18G092700 Manihot esculenta
MD05G1027000 Malus domestica
MD08G1224700 Malus domestica
MD10G1026300 Malus domestica
MD15G1417900 Malus domestica
Medtr1g098590 Medicago truncatula
MELO3C008337.2 Cucumis melo
MELO3C014384.2 Cucumis melo
MELO3C024087.2 Cucumis melo
MELO3C029930.2 Cucumis melo
Migut.B00653 Erythranthe guttata
Migut.C00999 Erythranthe guttata
Migut.N01024 Erythranthe guttata
MSTRG.1088 Avicennia marina
MSTRG.27834 Avicennia marina
Nitab4.5_0000249g0370 Nicotiana tabacum
Nitab4.5_0001062g0080 Nicotiana tabacum
Nitab4.5_0009071g0010 Nicotiana tabacum
Nitab4.5_0009570g0050 Nicotiana tabacum
Oeu000648.1 Olea europaea
Oeu023263.1 Olea europaea
Oeu031096.1 Olea europaea
Oeu051270.1 Olea europaea
Os01g0867300 Oryza sativa ssp. japonica
Peaxi162Scf00599g00047 Petunia axillaris
Peaxi162Scf01290g00246 Petunia axillaris
PGR042G1164 Punica granatum
PGR042G1706 Punica granatum
PGSC0003DMG400029774 Solanum tuberosum
Phvul.002G203300 Phaseolus vulgaris
Phvul.007G081000 Phaseolus vulgaris
Potri.002G067400 Populus trichocarpa
Potri.005G192900 Populus trichocarpa
Prupe.1G562000 Prunus persica
Prupe.8G031500 Prunus persica
Psat6g192360 Pisum sativum
Psat7g095080 Pisum sativum
QL02p039006 Quercus lobata
RcHm_v2.0_Chr6g0275281 Rosa chinensis
RcHm_v2.0_Chr7g0224461 Rosa chinensis
Rhsim05G0113600 Rhododendron simsii
Rhsim06G0035300 Rhododendron simsii
Sabra02G0053300 Salix brachista
Sabra05G0147400 Salix brachista
SalBow6G0585 Salvia bowleyana
SalBow6G0812 Salvia bowleyana
SalBow6G1005 Salvia bowleyana
SalBow7G2373 Salvia bowleyana
Sc02g0004010 Simmondsia chinensis
Sed0009435 Sechium edule
SGA_v2.0_scaffold145G36060 Striga asiatica
SGA_v2.0_scaffold24G10320 Striga asiatica
SGA_v2.0_scaffold292G47360 Striga asiatica
SGA_v2.0_scaffold332G48932 Striga asiatica
SGA_v2.0_scaffold48G17999 Striga asiatica
SHI09064 Sapria himalayana
Solyc01g104650.3 Solanum lycopersicum
Solyc04g071510.3 Solanum lycopersicum
Sopen01g047160 Solanum pennellii
Sopen04g027480 Solanum pennellii
Sp2g08910 Schrenkiella parvula
THA.LOC104807034 Tarenaya hassleriana
THA.LOC104809203 Tarenaya hassleriana
THA.LOC104810660 Tarenaya hassleriana
Thecc.08G153700 Theobroma cacao
Thhalv10003246m.g Eutrema salsugineum
Thhalv10009710m.g Eutrema salsugineum
TPR.G17057 Trifolium pratense
TPR.G23806 Trifolium pratense
TWI14G1120 Tripterygium wilfordii
TWI32G0127 Tripterygium wilfordii
TWI60G1052 Tripterygium wilfordii
unitig_699.g19859 Utricularia gibba
unitig_747.g21256 Utricularia gibba
unitig_749.g13916 Utricularia gibba
vmacro21152 Vaccinium macrocarpon
VMungo0720G2434 Vigna mungo
Zm00001eb146690 Zea mays
Zm00001eb366690 Zea mays

User provided reference genes

Program Settings