Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p03870 Brassica napus
A02p39370 Brassica napus
A03p34380 Brassica napus
A06p36830 Brassica napus
A09p05770 Brassica napus
Aa31LG5G16360 Aethionema arabicum
Actinidia33794 Actinidia chinensis
Actinidia34308 Actinidia chinensis
Ah.13g072750 Amaranthus hybridus
AL3G16710 Arabidopsis lyrata
AL6G27920 Arabidopsis lyrata
AL6G38450 Arabidopsis lyrata
Aqoxy1G04227 Aquilegia oxysepala
Aqoxy1G04228 Aquilegia oxysepala
Aqoxy1G04229 Aquilegia oxysepala
Aqoxy3G02161 Aquilegia oxysepala
Aqoxy3G02718 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.5NF29Y Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.8QBK2E Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.CR9YGF Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.P7DY53 Arachis hypogaea
AT3G05936 Arabidopsis thaliana
AT5G16920 Arabidopsis thaliana
AT5G26730 Arabidopsis thaliana
ATR0624G116 Amborella trichopoda
ATR0829G139 Amborella trichopoda
AUR62002065 Chenopodium quinoa
BcaB04g19228 Brassica carinata
BcaB04g19233 Brassica carinata
BcaB04g19726 Brassica carinata
BcaB04g19727 Brassica carinata
BcaB07g29963 Brassica carinata
BcaC01g04309 Brassica carinata
BcaC03g18525 Brassica carinata
BcaC04g23625 Brassica carinata
BcaC04g23626 Brassica carinata
BcaNung00434 Brassica carinata
BcaNung02824 Brassica carinata
BcaNung02825 Brassica carinata
BcaNung03959 Brassica carinata
BolC2t06783H Brassica oleracea
BolC2t11965H Brassica oleracea
BolC3t16468H Brassica oleracea
BolC7t44701H Brassica oleracea
BolC9t53556H Brassica oleracea
BraA02t05351Z Brassica rapa
BraA02t08902Z Brassica rapa
BraA03t12614Z Brassica rapa
BraA06t26609Z Brassica rapa
BraA09t36218Z Brassica rapa
C02p08670 Brassica napus
C02p59100 Brassica napus
C03p41850 Brassica napus
C07p41660 Brassica napus
C09p06370 Brassica napus
CAN.G65.131 Capsicum annuum
CANSAT21G0248 Cannabis sativa
CARHR080410 Cardamine hirsuta
CARHR186960 Cardamine hirsuta
CARHR186970 Cardamine hirsuta
CARHR196240 Cardamine hirsuta
Carub.0003s0532 Capsella rubella
Carub.0006s1513 Capsella rubella
Carub.0006s2421 Capsella rubella
Carub.0006s2422 Capsella rubella
Carub.0006s2423 Capsella rubella
Ca_00744_v3 Cicer arietinum L.
Ca_06459_v3 Cicer arietinum L.
Cc00_g28240 Coffea canephora
Cfa016035 Carpinus fangiana
Ciclev10017620m.g Citrus clementina
Ciclev10021912m.g Citrus clementina
CiPaw.06G032900 Carya illinoinensis
ClCG01G010650 Citrullus lanatus
ClCG02G002710 Citrullus lanatus
COL.COLO4_06064 Corchorus olitorius
Cpa.g.sc504.5 Carica papaya
CsaV3_7G002660 Cucumis sativus L.
CsaV3_7G023690 Cucumis sativus L.
CSS0037566 Camellia sinensis var. sinensis
DCAR_010543 Daucus carota
Duzib106G1874 Durio zibethinus
Duzib128G0448 Durio zibethinus
Duzib177G0557 Durio zibethinus
ECA233G1163 Erigeron canadensis
EL10Ac3g05074 Beta vulgaris
Eucgr.K00086 Eucalyptus grandis
Eucgr.L03441 Eucalyptus grandis
FAN05G2299 Fragaria x ananassa
FAN25G1738 Fragaria x ananassa
FvH4_3g00560 Fragaria vesca
Glyma.02G305800 Glycine max
Glyma.09G012100 Glycine max
Glyma.14G007200 Glycine max
Glyma.15G116750 Glycine max
Glyma.17G149700 Glycine max
Gohir.A11G303600 Gossypium hirsutum
Gohir.D11G318900 Gossypium hirsutum
Gorai.007G348900 Gossypium raimondii
HanXRQChr14g0462981 Helianthus annuus
Haze_00422 Corylus avellana
Hma1.2p1_1267F.1_g271530 Hydrangea macrophylla
Hma1.2p1_1680F.1_g297170 Hydrangea macrophylla
Hma1.2p1_2614F.1_g325410 Hydrangea macrophylla
Lalb_Chr05g0220821 Lupinus albus
Lalb_Chr16g0386341 Lupinus albus
Lalb_Chr17g0349111 Lupinus albus
Lalb_Chr20g0119391 Lupinus albus
Lj3P887T57 Lonicera japonica
Lj4g0026545 Lotus japonicus
Lj6g0026147 Lotus japonicus
LjContig00081g0009748 Lotus japonicus
Lsat_1_v5_gn_2_136720 Lactuca sativa
Manes.09G126900 Manihot esculenta
MBI04_g20973_MAGBIO Magnolia biondii
MD09G1122000 Malus domestica
Medtr2g026520 Medicago truncatula
Medtr4g099150 Medicago truncatula
Medtr5g097370 Medicago truncatula
MELO3C024107.2 Cucumis melo
MELO3C028604.2 Cucumis melo
Migut.F00942 Erythranthe guttata
Nitab4.5_0000021g0580 Nicotiana tabacum
Nitab4.5_0001762g0070 Nicotiana tabacum
Nn1g01862 Nelumbo nucifera
Nn1g03229 Nelumbo nucifera
Nn3g19378 Nelumbo nucifera
Oeu027885.1 Olea europaea
Os12g0233900 Oryza sativa ssp. japonica
Peaxi162Scf00815g00311 Petunia axillaris
PGR142G2458 Punica granatum
PGR142G2930 Punica granatum
PGSC0003DMG400027034 Solanum tuberosum
Phvul.003G226500 Phaseolus vulgaris
Phvul.006G141400 Phaseolus vulgaris
Phvul.008G285700 Phaseolus vulgaris
Potri.006G016700 Populus trichocarpa
Potri.016G009000 Populus trichocarpa
Potri.019G049600 Populus trichocarpa
Prupe.2G326500 Prunus persica
Prupe.3G201600 Prunus persica
Prupe.4G006800 Prunus persica
Psat1g178200 Pisum sativum
Psat2g004440 Pisum sativum
Psat4g076520 Pisum sativum
PSO063G6858 Papaver somniferum
PSO210G1796 Papaver somniferum
PSO302G0013 Papaver somniferum
PSO782G5365 Papaver somniferum
QL09p023778 Quercus lobata
RcHm_v2.0_Chr2g0156681 Rosa chinensis
Rhsim03G0221600 Rhododendron simsii
Rhsim09G0213000 Rhododendron simsii
Sabra19G0059300 Salix brachista
SalBow2G0094 Salvia bowleyana
Sc13g0010870 Simmondsia chinensis
Sed0002316 Sechium edule
Sed0003500 Sechium edule
Sed0016160 Sechium edule
Sed0020467 Sechium edule
SGA_v2.0_scaffold50G18444 Striga asiatica
Sopen06g029160 Solanum pennellii
Sp2g21370 Schrenkiella parvula
Sp2g21380 Schrenkiella parvula
Sp3g04840 Schrenkiella parvula
Sp6g27190 Schrenkiella parvula
TAR374G1477 Trochodendron aralioides
TAR627G0054 Trochodendron aralioides
THA.LOC104803108 Tarenaya hassleriana
THA.LOC104818768 Tarenaya hassleriana
THA.LOC104826655 Tarenaya hassleriana
THA.LOC104827213 Tarenaya hassleriana
Thecc.05G213800 Theobroma cacao
Thhalv10005177m.g Eutrema salsugineum
Thhalv10005288m.g Eutrema salsugineum
Thhalv10014405m.g Eutrema salsugineum
Thhalv10021806m.g Eutrema salsugineum
TPR.G10569 Trifolium pratense
TPR.G1287 Trifolium pratense
TPR.G17125 Trifolium pratense
TWI34G0428 Tripterygium wilfordii
TWI36G0551 Tripterygium wilfordii
TWI38G0283 Tripterygium wilfordii
vmacro22176 Vaccinium macrocarpon
VMungo0251G1526 Vigna mungo
VMungo0540G0424 Vigna mungo
VMungo0647G1338 Vigna mungo

User provided reference genes

Program Settings