Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p42160 Brassica napus
A03p35840 Brassica napus
A05p39380 Brassica napus
A07p21590 Brassica napus
A09p46380 Brassica napus
Aa31LG10G8550 Aethionema arabicum
Aa31LG3G2170 Aethionema arabicum
Aa31LG5G22410 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.1629 Anthoceros agrestis
Actinidia13096 Actinidia chinensis
Ah.01g015060 Amaranthus hybridus
AL3G20960 Arabidopsis lyrata
AL4G33470 Arabidopsis lyrata
AL5G34280 Arabidopsis lyrata
Aqoxy4G03232 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.5V2EV5 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.FC0UQU Arachis hypogaea
AT2G37120 Arabidopsis thaliana
AT3G09735 Arabidopsis thaliana
AT3G53370 Arabidopsis thaliana
ATR0716G020 Amborella trichopoda
Atru.chr8.1893 Acer truncatum
AUR62025008 Chenopodium quinoa
BcaB01g00283 Brassica carinata
BcaB02g07791 Brassica carinata
BcaC05g29666 Brassica carinata
BcaC05g29696 Brassica carinata
BolC1t05435H Brassica oleracea
BolC5t34493H Brassica oleracea
BolC6t37304H Brassica oleracea
BolC8t50475H Brassica oleracea
BraA01t04284Z Brassica rapa
BraA03t12757Z Brassica rapa
BraA05t22719Z Brassica rapa
BraA07t29841Z Brassica rapa
BraA09t40103Z Brassica rapa
C03p43490 Brassica napus
C04p39250 Brassica napus
C05p58400 Brassica napus
C06p21180 Brassica napus
C08p28710 Brassica napus
CAN.G1091.10 Capsicum annuum
CAN.G933.3 Capsicum annuum
CANSAT54G1105 Cannabis sativa
CARHR084160 Cardamine hirsuta
CARHR131630 Cardamine hirsuta
CARHR163250 Cardamine hirsuta
Carub.0003s0883 Capsella rubella
Carub.0004s1901 Capsella rubella
Carub.0005s1992 Capsella rubella
CBR_g41122 Chara braunii
Cc06_g03710 Coffea canephora
CDE04G2181 Ceratophyllum demersum
CDE07G1192 Ceratophyllum demersum
Cfa017524 Carpinus fangiana
Ciclev10013218m.g Citrus clementina
CiPaw.09G178500 Carya illinoinensis
CiPaw.10G136100 Carya illinoinensis
ClCG04G008890 Citrullus lanatus
ClCG10G020440 Citrullus lanatus
Cpa.g.sc638.2 Carica papaya
CsaV3_6G039400 Cucumis sativus L.
CSS0018024 Camellia sinensis var. sinensis
CSS0043834 Camellia sinensis var. sinensis
DCAR_014972 Daucus carota
DCAR_017715 Daucus carota
Dinv32777 Davidia involucrata
Dinv37267 Davidia involucrata
Duzib093G1390 Durio zibethinus
Duzib106G1222 Durio zibethinus
Duzib128G1560 Durio zibethinus
ECA233G0967 Erigeron canadensis
EL10Ac9g22481 Beta vulgaris
Eucgr.A01168 Eucalyptus grandis
FAN02G2121 Fragaria x ananassa
FAN05G2348 Fragaria x ananassa
FAN09G1094 Fragaria x ananassa
FAN14G0104 Fragaria x ananassa
FvH4_6g15550 Fragaria vesca
Glyma.03G179000 Glycine max
Glyma.10G050700 Glycine max
Glyma.13G138200 Glycine max
Glyma.19G179700 Glycine max
Gohir.A01G216200 Gossypium hirsutum
Gohir.A04G075600 Gossypium hirsutum
Gohir.A09G151300 Gossypium hirsutum
Gohir.D01G205000 Gossypium hirsutum
Gohir.D04G114700 Gossypium hirsutum
Gohir.D09G146900 Gossypium hirsutum
Gorai.002G249300 Gossypium raimondii
Gorai.006G168100 Gossypium raimondii
Gorai.009G419300 Gossypium raimondii
GSVIVG01025155001 Vitis vinifera
GSVIVG01025648001 Vitis vinifera
HanXRQChr02g0052001 Helianthus annuus
HanXRQChr13g0399601 Helianthus annuus
Haze_20625 Corylus avellana
Haze_20628 Corylus avellana
Hma1.2p1_0111F.1_g054020 Hydrangea macrophylla
Hma1.2p1_0614F.1_g189580 Hydrangea macrophylla
HPP92_015412 Vanilla planifolia
HPP92_018116 Vanilla planifolia
HPP92_018154 Vanilla planifolia
Hund20195 Selenicereus undatus
Lalb_Chr01g0018961 Lupinus albus
Lalb_Chr02g0156271 Lupinus albus
Lalb_Chr20g0112831 Lupinus albus
Lalb_Chr21g0314731 Lupinus albus
Lalb_Chr25g0289191 Lupinus albus
Lj1g0024655 Lotus japonicus
Lj5g0004266 Lotus japonicus
Lsat_1_v5_gn_6_30301 Lactuca sativa
Manes.08G004601 Manihot esculenta
Manes.09G076337 Manihot esculenta
Mapoly0048s0104 Marchantia polymorpha
MBI02_g25821_MAGBIO Magnolia biondii
MD04G1102100 Malus domestica
MD12G1121800 Malus domestica
Medtr7g100880 Medicago truncatula
Medtr7g100905 Medicago truncatula
MELO3C009327.2 Cucumis melo
Migut.J00425 Erythranthe guttata
Migut.L01670 Erythranthe guttata
MSTRG.5727 Avicennia marina
Nitab4.5_0000669g0100 Nicotiana tabacum
Nitab4.5_0000754g0160 Nicotiana tabacum
Nitab4.5_0003871g0010 Nicotiana tabacum
Nitab4.5_0003973g0060 Nicotiana tabacum
Nitab4.5_0006156g0010 Nicotiana tabacum
Nitab4.5_0008568g0020 Nicotiana tabacum
Nn2g10711 Nelumbo nucifera
Nn2g13031 Nelumbo nucifera
Oeu014968.1 Olea europaea
Oeu060097.1 Olea europaea
Os04g0408700 Oryza sativa ssp. japonica
Os04g0408900 Oryza sativa ssp. japonica
Peaxi162Scf00005g00388 Petunia axillaris
Peaxi162Scf00472g00033 Petunia axillaris
Peaxi162Scf00488g00093 Petunia axillaris
PGR142G3070 Punica granatum
PGSC0003DMG400001772 Solanum tuberosum
PGSC0003DMG400020934 Solanum tuberosum
PGSC0003DMG401017590 Solanum tuberosum
Phvul.001G175700 Phaseolus vulgaris
Phvul.007G107500 Phaseolus vulgaris
Potri.006G130200 Populus trichocarpa
Potri.016G087400 Populus trichocarpa
Pp3c14_22690 Physcomitrium patens
Pp3c1_39960 Physcomitrium patens
Prupe.6G239600 Prunus persica
Psat0s1011g0080 Pisum sativum
Psat3g043880 Pisum sativum
PSO384G0375 Papaver somniferum
QL04p031290 Quercus lobata
QL07p045029 Quercus lobata
RcHm_v2.0_Chr3g0469111 Rosa chinensis
SalBow3G0799 Salvia bowleyana
SalBow5G0952 Salvia bowleyana
SalBow5G4464 Salvia bowleyana
Sc02g0001910 Simmondsia chinensis
Sc06g0010000 Simmondsia chinensis
Sed0001939 Sechium edule
Sed0008432 Sechium edule
SEGI_21131 Sequoiadendron giganteum
SHI12537 Sapria himalayana
Solyc09g007500.3 Solanum lycopersicum
Sopen09g002370 Solanum pennellii
Sopen10g035430 Solanum pennellii
Sp3g08080 Schrenkiella parvula
Sp4g19440 Schrenkiella parvula
Sp5g08980 Schrenkiella parvula
TAR369G0518 Trochodendron aralioides
TAR623G1327 Trochodendron aralioides
TAR633G2048 Trochodendron aralioides
THA.LOC104805286 Tarenaya hassleriana
THA.LOC104806498 Tarenaya hassleriana
THA.LOC104823451 Tarenaya hassleriana
Thecc.05G056100 Theobroma cacao
Thhalv10010878m.g Eutrema salsugineum
Thhalv10017496m.g Eutrema salsugineum
Thhalv10021874m.g Eutrema salsugineum
TPR.G18268 Trifolium pratense
TPR.G18279 Trifolium pratense
TWI53G0682 Tripterygium wilfordii
TWI74G0472 Tripterygium wilfordii
unitig_26.g9219 Utricularia gibba
vmacro08724 Vaccinium macrocarpon
Zm00001eb084180 Zea mays

User provided reference genes

Program Settings