Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p46320 Brassica napus
Aa31LG11G2690 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.4714 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.4752 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.3759 Anthoceros agrestis
Actinidia13715 Actinidia chinensis
Actinidia38417 Actinidia chinensis
Ah.01g001470 Amaranthus hybridus
AL6G34460 Arabidopsis lyrata
Aqoxy1G03745 Aquilegia oxysepala
Aqoxy3G02829 Aquilegia oxysepala
Aqoxy3G04306 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.PE1F6G Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.U7IVDN Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.W1X9QM Arachis hypogaea
AT5G23240 Arabidopsis thaliana
ATR0618G209 Amborella trichopoda
Atru.chr11.1140 Acer truncatum
Atru.chr6.2357 Acer truncatum
AUR62017710 Chenopodium quinoa
AUR62032971 Chenopodium quinoa
BolC7t44955H Brassica oleracea
BraA03t13756Z Brassica rapa
C07p44340 Brassica napus
CAN.G39.7 Capsicum annuum
CANSAT64G0198 Cannabis sativa
CANSAT78G0256 Cannabis sativa
CARHR190300 Cardamine hirsuta
Carub.0006s2101 Capsella rubella
Cc07_g01880 Coffea canephora
Cc11_g03440 Coffea canephora
CDE08G0147 Ceratophyllum demersum
Cfa007392 Carpinus fangiana
Ciclev10016190m.g Citrus clementina
Ciclev10031498m.g Citrus clementina
CiPaw.02G035300 Carya illinoinensis
CiPaw.03G041900 Carya illinoinensis
CiPaw.05G169300 Carya illinoinensis
ClCG00G002140 Citrullus lanatus
ClCG02G014080 Citrullus lanatus
ClCG09G019160 Citrullus lanatus
COL.COLO4_29085 Corchorus olitorius
COL.COLO4_33051 Corchorus olitorius
Cpa.g.sc0.126 Carica papaya
Cre07.g320350 Chlamydomonas reinhardtii
CsaV3_5G006090 Cucumis sativus L.
CsaV3_5G027230 Cucumis sativus L.
CSS0002352 Camellia sinensis var. sinensis
CSS0006043 Camellia sinensis var. sinensis
CSS0049089 Camellia sinensis var. sinensis
DCAR_023462 Daucus carota
Dinv17622 Davidia involucrata
Dinv33462 Davidia involucrata
Duzib132G0272 Durio zibethinus
Duzib147G0109 Durio zibethinus
Duzib248G0139 Durio zibethinus
ECA246G0382 Erigeron canadensis
EL10Ac9g22962 Beta vulgaris
Eucgr.G02581 Eucalyptus grandis
Eucgr.J02231 Eucalyptus grandis
FAN07G0926 Fragaria x ananassa
FAN09G1009 Fragaria x ananassa
FAN12G2121 Fragaria x ananassa
FAN12G3648 Fragaria x ananassa
FAN14G4786 Fragaria x ananassa
FAN17G1001 Fragaria x ananassa
FvH4_4g37080 Fragaria vesca
FvH4_6g51170 Fragaria vesca
Glyma.07G197600 Glycine max
Glyma.09G283400 Glycine max
Glyma.19G063100 Glycine max
Glyma.20G002400 Glycine max
Gohir.A01G012600 Gossypium hirsutum
Gohir.A09G028400 Gossypium hirsutum
Gohir.D01G013800 Gossypium hirsutum
Gohir.D09G027800 Gossypium hirsutum
Gorai.002G015600 Gossypium raimondii
Gorai.006G032300 Gossypium raimondii
GSVIVG01001992001 Vitis vinifera
GSVIVG01001994001 Vitis vinifera
GSVIVG01026228001 Vitis vinifera
HanXRQChr02g0041391 Helianthus annuus
HanXRQChr11g0320561 Helianthus annuus
HanXRQChr15g0475371 Helianthus annuus
HanXRQChr17g0540981 Helianthus annuus
Haze_14717 Corylus avellana
Hma1.2p1_0044F.1_g026025 Hydrangea macrophylla
Hma1.2p1_1291F.1_g273580 Hydrangea macrophylla
Hund08607 Selenicereus undatus
Lalb_Chr18g0051531 Lupinus albus
Lj1g0015835 Lotus japonicus
Lj2g0015389 Lotus japonicus
Lj7A596T40 Lonicera japonica
Lsat_1_v5_gn_0_19580 Lactuca sativa
Lsat_1_v5_gn_3_36300 Lactuca sativa
Manes.13G084000 Manihot esculenta
Manes.17G115100 Manihot esculenta
Mapoly0105s0023 Marchantia polymorpha
MBI06_g04985_MAGBIO Magnolia biondii
MBI06_g16015_MAGBIO Magnolia biondii
MBI10_g27986_MAGBIO Magnolia biondii
MBI10_g36535_MAGBIO Magnolia biondii
MCO01G660 Micromonas commoda
MCO05G279 Micromonas commoda
MCO09G138 Micromonas commoda
MCO10G036 Micromonas commoda
MCO14G069 Micromonas commoda
MCO14G496 Micromonas commoda
MD13G1003800 Malus domestica
MD17G1030400 Malus domestica
Medtr1g038430 Medicago truncatula
Medtr1g038510 Medicago truncatula
MELO3C011750.2 Cucumis melo
MELO3C021566.2 Cucumis melo
Migut.C00668 Erythranthe guttata
Migut.H00089 Erythranthe guttata
MSTRG.25132 Avicennia marina
Nitab4.5_0003198g0010 Nicotiana tabacum
Nitab4.5_0005579g0030 Nicotiana tabacum
Nitab4.5_0012292g0020 Nicotiana tabacum
Nn3g16772 Nelumbo nucifera
Nn3g18664 Nelumbo nucifera
Oeu019096.1 Olea europaea
Oeu063468.2 Olea europaea
Os04g0675400 Oryza sativa ssp. japonica
Os06g0474800 Oryza sativa ssp. japonica
Os06g0498450 Oryza sativa ssp. japonica
Peaxi162Scf00334g00325 Petunia axillaris
Peaxi162Scf00700g00533 Petunia axillaris
PGR083G1139 Punica granatum
PGR142G2284 Punica granatum
PGSC0003DMG400006735 Solanum tuberosum
Phvul.003G004300 Phaseolus vulgaris
Phvul.006G121900 Phaseolus vulgaris
Potri.001G347600 Populus trichocarpa
Potri.007G072600 Populus trichocarpa
Pp3c27_1590 Physcomitrium patens
Pp3c3_32230 Physcomitrium patens
Pp3c5_13590 Physcomitrium patens
PRCOL_00004997 Prasinoderma coloniale
PRCOL_00005113 Prasinoderma coloniale
PRCOL_00006718 Prasinoderma coloniale
PRCOL_00006940 Prasinoderma coloniale
Prupe.1G348700 Prunus persica
Prupe.3G207200 Prunus persica
Prupe.3G289400 Prunus persica
Psat6g099560 Pisum sativum
PSO063G6422 Papaver somniferum
PSO782G1359 Papaver somniferum
PSO832G4261 Papaver somniferum
QL02p075213 Quercus lobata
QL03p046497 Quercus lobata
RcHm_v2.0_Chr2g0172761 Rosa chinensis
RcHm_v2.0_Chr4g0446831 Rosa chinensis
Rhsim04G0172100 Rhododendron simsii
Rhsim10G0018400 Rhododendron simsii
Sabra07G0061200 Salix brachista
Sabra16G0227100 Salix brachista
SalBow1G8141 Salvia bowleyana
SalBow7G4156 Salvia bowleyana
Sc07g0003190 Simmondsia chinensis
Sed0008039 Sechium edule
Sed0023427 Sechium edule
SEGI_26845 Sequoiadendron giganteum
SGA_v2.0_scaffold24G10276 Striga asiatica
SGA_v2.0_scaffold481G52322 Striga asiatica
SMO147G0179 Selaginella moellendorffii
SMO364G0270 Selaginella moellendorffii
Solyc02g014860.3 Solanum lycopersicum
Sopen02g004380 Solanum pennellii
Sp2g23910 Schrenkiella parvula
TAR374G1749 Trochodendron aralioides
TAR622G1083 Trochodendron aralioides
THA.LOC104818375 Tarenaya hassleriana
Thecc.02G158300 Theobroma cacao
Thecc.04G015100 Theobroma cacao
Thhalv10005272m.g Eutrema salsugineum
TPR.G29791 Trifolium pratense
TWI53G1450 Tripterygium wilfordii
TWI56G0506 Tripterygium wilfordii
unitig_85.g27228 Utricularia gibba
vmacro05460 Vaccinium macrocarpon
vmacro05854 Vaccinium macrocarpon
vmacro08859 Vaccinium macrocarpon
vmacro23479 Vaccinium macrocarpon
VMungo0251G3263 Vigna mungo
Zm00001eb278150 Zea mays
Zm00001eb433640 Zea mays

User provided reference genes

Program Settings