Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p23420 Brassica napus
A05p02520 Brassica napus
Aa31LG1G23780 Aethionema arabicum
Actinidia02535 Actinidia chinensis
Actinidia07511 Actinidia chinensis
Actinidia09330 Actinidia chinensis
Actinidia19412 Actinidia chinensis
Actinidia33702 Actinidia chinensis
Actinidia39226 Actinidia chinensis
Ah.04g151780 Amaranthus hybridus
Ah.13g076450 Amaranthus hybridus
AL4G39860 Arabidopsis lyrata
AL4G39870 Arabidopsis lyrata
AL4G40080 Arabidopsis lyrata
AL5G38950 Arabidopsis lyrata
Aqoxy2G00151 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.MS35EQ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YDMB1U Arachis hypogaea
AT2G41770 Arabidopsis thaliana
AT3G57420 Arabidopsis thaliana
ATR0626G026 Amborella trichopoda
Atru.chr1.1095 Acer truncatum
AUR62024446 Chenopodium quinoa
AUR62026036 Chenopodium quinoa
BcaNung02835 Brassica carinata
BcaNung06246 Brassica carinata
BolC3t15166H Brassica oleracea
BolC4t21937H Brassica oleracea
BraA03t11559Z Brassica rapa
BraA05t19245Z Brassica rapa
C03p27940 Brassica napus
C04p02980 Brassica napus
CAN.G219.62 Capsicum annuum
CAN.G676.68 Capsicum annuum
CANSAT80G0970 Cannabis sativa
CANSAT80G0982 Cannabis sativa
CANSAT80G1317 Cannabis sativa
CANSAT80G2225 Cannabis sativa
CARHR136860 Cardamine hirsuta
CARHR167370 Cardamine hirsuta
CARHR167380 Cardamine hirsuta
CARHR167620 Cardamine hirsuta
Carub.0004s2405 Capsella rubella
Carub.0005s2426 Capsella rubella
Ca_26017_v3 Cicer arietinum L.
Cc02_g29000 Coffea canephora
Cc06_g17090 Coffea canephora
CDE07G0124 Ceratophyllum demersum
CDE11G0341 Ceratophyllum demersum
CDE11G0464 Ceratophyllum demersum
CDE11G0987 Ceratophyllum demersum
Ciclev10004391m.g Citrus clementina
CiPaw.09G038100 Carya illinoinensis
CiPaw.10G033200 Carya illinoinensis
ClCG09G003920 Citrullus lanatus
ClCG10G016580 Citrullus lanatus
COL.COLO4_28278 Corchorus olitorius
Cpa.g.sc92.50 Carica papaya
Cre06.g260650 Chlamydomonas reinhardtii
Cre18.g748697 Chlamydomonas reinhardtii
CsaV3_3G039750 Cucumis sativus L.
CsaV3_7G030820 Cucumis sativus L.
CSS0010444 Camellia sinensis var. sinensis
CSS0035654 Camellia sinensis var. sinensis
CSS0046501 Camellia sinensis var. sinensis
DCAR_013601 Daucus carota
Dinv09321 Davidia involucrata
Dinv12480 Davidia involucrata
Dinv39600 Davidia involucrata
Duzib093G1511 Durio zibethinus
Duzib128G1026 Durio zibethinus
Duzib205G0897 Durio zibethinus
ECA247G3671 Erigeron canadensis
ECA248G2213 Erigeron canadensis
EL10Ac3g07088 Beta vulgaris
Eucgr.A02349 Eucalyptus grandis
FAN02G1020 Fragaria x ananassa
FAN05G4085 Fragaria x ananassa
FAN06G0077 Fragaria x ananassa
FAN09G0940 Fragaria x ananassa
FAN10G4002 Fragaria x ananassa
FAN14G5543 Fragaria x ananassa
FvH4_6g23790 Fragaria vesca
FvH4_7g01460 Fragaria vesca
Glyma.02G184100 Glycine max
Glyma.10G097600 Glycine max
Gohir.A09G122200 Gossypium hirsutum
Gohir.A09G122300 Gossypium hirsutum
Gohir.D09G118300 Gossypium hirsutum
Gohir.D09G118400 Gossypium hirsutum
Gorai.006G136600 Gossypium raimondii
Gorai.006G136700 Gossypium raimondii
GSVIVG01032164001 Vitis vinifera
GSVIVG01033278001 Vitis vinifera
HanXRQChr01g0008741 Helianthus annuus
HanXRQChr10g0288771 Helianthus annuus
Haze_19859 Corylus avellana
Hma1.2p1_2002F.1_g310720 Hydrangea macrophylla
HPP92_010728 Vanilla planifolia
HPP92_012091 Vanilla planifolia
Hund19149 Selenicereus undatus
Lalb_Chr06g0173451 Lupinus albus
Lalb_Chr20g0110481 Lupinus albus
Lalb_Chr21g0316481 Lupinus albus
Lj2A385G21 Lonicera japonica
Lj5g0024914 Lotus japonicus
Lju124C41T4 Lonicera japonica
Lsat_1_v5_gn_5_161461 Lactuca sativa
Lsat_1_v5_gn_9_29041 Lactuca sativa
Manes.08G050700 Manihot esculenta
Manes.09G021900 Manihot esculenta
Mapoly0004s0304 Marchantia polymorpha
MD07G1018300 Malus domestica
MD12G1073600 Malus domestica
MD14G1071900 Malus domestica
Medtr0121s0010 Medicago truncatula
MELO3C009717.2 Cucumis melo
MELO3C023570.2 Cucumis melo
Migut.J01760 Erythranthe guttata
MSTRG.6431 Avicennia marina
Nitab4.5_0000707g0190 Nicotiana tabacum
Nitab4.5_0005195g0070 Nicotiana tabacum
Nitab4.5_0008441g0020 Nicotiana tabacum
Nitab4.5_0010636g0040 Nicotiana tabacum
Nn2g15253 Nelumbo nucifera
Nn7g36273 Nelumbo nucifera
Oeu008162.1 Olea europaea
Oeu022754.1 Olea europaea
Oeu023110.1 Olea europaea
Oeu027406.1 Olea europaea
Os05g0391200 Oryza sativa ssp. japonica
Os07g0656400 Oryza sativa ssp. japonica
Peaxi162Scf00130g00016 Petunia axillaris
Peaxi162Scf00694g00117 Petunia axillaris
PGR004G2044 Punica granatum
PGSC0003DMG400006853 Solanum tuberosum
PGSC0003DMG400027249 Solanum tuberosum
Phvul.007G252800 Phaseolus vulgaris
Potri.006G051000 Populus trichocarpa
Potri.016G055700 Populus trichocarpa
Pp3c14_20380 Physcomitrium patens
Pp3c17_18550 Physcomitrium patens
Prupe.2G020200 Prunus persica
Prupe.7G061300 Prunus persica
Psat6g120000 Pisum sativum
PSO339G5560 Papaver somniferum
PSO384G3418 Papaver somniferum
QL07p000311 Quercus lobata
RcHm_v2.0_Chr1g0317301 Rosa chinensis
RcHm_v2.0_Chr3g0482321 Rosa chinensis
Rhsim03G0021200 Rhododendron simsii
Rhsim03G0022300 Rhododendron simsii
Rhsim03G0147000 Rhododendron simsii
Rhsim07G0058200 Rhododendron simsii
Sabra06G0035700 Salix brachista
Sabra16G0058400 Salix brachista
SalBow6G5443 Salvia bowleyana
Sc13g0001770 Simmondsia chinensis
Sed0006713 Sechium edule
Sed0014161 Sechium edule
Sed0014274 Sechium edule
SEGI_32089 Sequoiadendron giganteum
SGA_v2.0_scaffold69G23114 Striga asiatica
SMO165G0114 Selaginella moellendorffii
SMO329G0078 Selaginella moellendorffii
Solyc01g087600.3 Solanum lycopersicum
Solyc04g015740.3 Solanum lycopersicum
Sopen01g034570 Solanum pennellii
Sopen04g007820 Solanum pennellii
Sp4g24040 Schrenkiella parvula
Sp5g05180 Schrenkiella parvula
TAR633G1518 Trochodendron aralioides
TAR636G3054 Trochodendron aralioides
THA.LOC104802108 Tarenaya hassleriana
Thecc.05G153700 Theobroma cacao
Thhalv10005801m.g Eutrema salsugineum
Thhalv10016286m.g Eutrema salsugineum
TPR.G10642 Trifolium pratense
TWI74G1194 Tripterygium wilfordii
TWI77G0711 Tripterygium wilfordii
unitig_26.g9047 Utricularia gibba
unitig_26.g9048 Utricularia gibba
unitig_749.g14146 Utricularia gibba
vmacro07855 Vaccinium macrocarpon
vmacro13691 Vaccinium macrocarpon
VMungo0720G2955 Vigna mungo
Zm00001eb287230 Zea mays
Zm00001eb329540 Zea mays

User provided reference genes

Program Settings