Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p08470 Brassica napus
A07p09400 Brassica napus
A07p11220 Brassica napus
A09p28020 Brassica napus
A09p34660 Brassica napus
Aa31LG2G14410 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.301 Anthoceros agrestis
Actinidia13653 Actinidia chinensis
Actinidia14919 Actinidia chinensis
Actinidia37054 Actinidia chinensis
Ah.13g066610 Amaranthus hybridus
Ah.13g074570 Amaranthus hybridus
AL6G50590 Arabidopsis lyrata
Aqoxy1G02521 Aquilegia oxysepala
Aqoxy5G01320 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.2990BW Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.956DWW Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.CT835L Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.FP5V95 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.KE86EX Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.S7QI7K Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.V43L5Z Arachis hypogaea
AT1G31660 Arabidopsis thaliana
AT4G02465 Arabidopsis thaliana
ATR1132G059 Amborella trichopoda
Atru.chr3.2262 Acer truncatum
Atru.chr3.2263 Acer truncatum
Atru.chr3.2268 Acer truncatum
Atru.chr3.2269 Acer truncatum
Atru.chr3.3291 Acer truncatum
AUR62035508 Chenopodium quinoa
AUR62036018 Chenopodium quinoa
BcaB03g13795 Brassica carinata
BcaB07g32813 Brassica carinata
BcaC05g27183 Brassica carinata
BcaC05g27926 Brassica carinata
BcaC06g35362 Brassica carinata
BcaC06g35364 Brassica carinata
BcaC06g35591 Brassica carinata
BolC5t31810H Brassica oleracea
BolC7t41812H Brassica oleracea
BolC7t41946H Brassica oleracea
BolC7t42195H Brassica oleracea
BolC7t42196H Brassica oleracea
BolC7t42199H Brassica oleracea
BolC7t42200H Brassica oleracea
BolC9t56391H Brassica oleracea
BraA07t28632Z Brassica rapa
BraA07t28735Z Brassica rapa
BraA07t28915Z Brassica rapa
BraA09t39000Z Brassica rapa
C07p13190 Brassica napus
C07p14470 Brassica napus
C07p16900 Brassica napus
C07p16910 Brassica napus
C07p16930 Brassica napus
C07p16940 Brassica napus
C07p16950 Brassica napus
C09p32650 Brassica napus
C09p35520 Brassica napus
C09p35530 Brassica napus
CANSAT01G2347 Cannabis sativa
CANSAT54G0397 Cannabis sativa
CANSAT80G0167 Cannabis sativa
CARHR286950 Cardamine hirsuta
Carub.0001s2998 Capsella rubella
Ca_25060_v3 Cicer arietinum L.
CBR_g984 Chara braunii
Cc05_g10190 Coffea canephora
CDE06G0350 Ceratophyllum demersum
Cfa011266 Carpinus fangiana
Cfa024010 Carpinus fangiana
Ciclev10023274m.g Citrus clementina
CiPaw.08G013900 Carya illinoinensis
ClCG09G009520 Citrullus lanatus
COL.COLO4_22663 Corchorus olitorius
COL.COLO4_24336 Corchorus olitorius
Cpa.g.sc54.5 Carica papaya
Cre01.g063267 Chlamydomonas reinhardtii
CsaV3_7G025330 Cucumis sativus L.
CSS0018218 Camellia sinensis var. sinensis
CSS0028028 Camellia sinensis var. sinensis
DCAR_002270 Daucus carota
DCAR_030782 Daucus carota
DCAR_030783 Daucus carota
Duzib168G1903 Durio zibethinus
ECA236G2713 Erigeron canadensis
EL10Ac3g06484 Beta vulgaris
EL10Ac3g06580 Beta vulgaris
Eucgr.F01411 Eucalyptus grandis
FAN11G3158 Fragaria x ananassa
FAN16G3269 Fragaria x ananassa
FAN21G1332 Fragaria x ananassa
FAN21G3990 Fragaria x ananassa
FAN25G2823 Fragaria x ananassa
FvH4_3g16580 Fragaria vesca
Glyma.03G190900 Glycine max
Glyma.05G087100 Glycine max
Gohir.A07G112700 Gossypium hirsutum
Gohir.A09G098001 Gossypium hirsutum
Gohir.D07G116200 Gossypium hirsutum
Gorai.001G124600 Gossypium raimondii
GSVIVG01011050001 Vitis vinifera
GSVIVG01038352001 Vitis vinifera
HanXRQChr13g0424451 Helianthus annuus
Haze_02513 Corylus avellana
Haze_18856 Corylus avellana
Hma1.2p1_0505F.1_g168130 Hydrangea macrophylla
HPP92_001514 Vanilla planifolia
Hund24921 Selenicereus undatus
Lalb_Chr21g0316901 Lupinus albus
Lj1C808T9 Lonicera japonica
Lj2g0021753 Lotus japonicus
Lsat_1_v5_gn_5_148460 Lactuca sativa
Manes.14G150400 Manihot esculenta
Manes.14G152600 Manihot esculenta
Mapoly0048s0058 Marchantia polymorpha
MBI17_g43195_MAGBIO Magnolia biondii
MCO03G098 Micromonas commoda
MD05G1209000 Malus domestica
MD10G1195400 Malus domestica
Medtr5g025980 Medicago truncatula
MELO3C024126.2 Cucumis melo
Migut.J00669 Erythranthe guttata
Migut.M00658 Erythranthe guttata
Migut.M00659 Erythranthe guttata
MSTRG.6707 Avicennia marina
Nitab4.5_0001864g0020 Nicotiana tabacum
Nitab4.5_0001924g0070 Nicotiana tabacum
Nn7g38381 Nelumbo nucifera
Oeu058434.1 Olea europaea
Os09g0352400 Oryza sativa ssp. japonica
Peaxi162Scf00111g00723 Petunia axillaris
PGR142G4312 Punica granatum
PGSC0003DMG400027653 Solanum tuberosum
Phvul.004G052800 Phaseolus vulgaris
Potri.001G394000 Populus trichocarpa
Potri.011G112500 Populus trichocarpa
Pp3c10_5710 Physcomitrium patens
Pp3c14_4070 Physcomitrium patens
Pp3c1_22730 Physcomitrium patens
PRCOL_00003636 Prasinoderma coloniale
Prupe.4G148600 Prunus persica
Psat2g144640 Pisum sativum
PSO339G1025 Papaver somniferum
PSO339G4670 Papaver somniferum
PSO541G1065 Papaver somniferum
PSO675G2950 Papaver somniferum
QL02p065039 Quercus lobata
RcHm_v2.0_Chr5g0027651 Rosa chinensis
RcHm_v2.0_Chr6g0291881 Rosa chinensis
Rhsim09G0104200 Rhododendron simsii
Rhsim09G0104400 Rhododendron simsii
RhsimUnG0127900 Rhododendron simsii
Sabra11G0099700 Salix brachista
Sabra16G0258400 Salix brachista
SalBow5G3252 Salvia bowleyana
SalBow6G0551 Salvia bowleyana
SalBow8G0566 Salvia bowleyana
Sc26g0001160 Simmondsia chinensis
Sed0023018 Sechium edule
SEGI_11889 Sequoiadendron giganteum
SEGI_32462 Sequoiadendron giganteum
SEGI_37931 Sequoiadendron giganteum
SGA_v2.0_scaffold24G10283 Striga asiatica
SGA_v2.0_scaffold30G12442 Striga asiatica
SGA_v2.0_scaffold73G24356 Striga asiatica
SHI14583 Sapria himalayana
SHI14588 Sapria himalayana
SMO358G0130 Selaginella moellendorffii
Solyc07g056550.3 Solanum lycopersicum
Sopen07g029910 Solanum pennellii
Sp1g27340 Schrenkiella parvula
TAR627G1042 Trochodendron aralioides
THA.LOC104814384 Tarenaya hassleriana
Thecc.09G274600 Theobroma cacao
Thecc.09G274800 Theobroma cacao
Thecc.09G275100 Theobroma cacao
Thhalv10007604m.g Eutrema salsugineum
Thhalv10028678m.g Eutrema salsugineum
TPR.G34458 Trifolium pratense
TPR.G9666 Trifolium pratense
TWI38G0227 Tripterygium wilfordii
unitig_748.g7599 Utricularia gibba
vmacro10596 Vaccinium macrocarpon
vmacro10597 Vaccinium macrocarpon
VMungo1127G0750 Vigna mungo
Zm00001eb065940 Zea mays

User provided reference genes

Program Settings