Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p23540 Brassica napus
A04p31970 Brassica napus
A05p02700 Brassica napus
Aa31LG1G24140 Aethionema arabicum
Actinidia22042 Actinidia chinensis
Actinidia22043 Actinidia chinensis
Actinidia22048 Actinidia chinensis
Actinidia32398 Actinidia chinensis
Actinidia32399 Actinidia chinensis
Ah.04g152510 Amaranthus hybridus
Ah.13g075770 Amaranthus hybridus
AL4G40410 Arabidopsis lyrata
Aqoxy1G04270 Aquilegia oxysepala
Aqoxy2G00100 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.AL1Y46 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.D8BKSU Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.DZ4RFW Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SE7UXR Arachis hypogaea
AT2G42040 Arabidopsis thaliana
ATR0598G173 Amborella trichopoda
ATR0598G250 Amborella trichopoda
Atru.chr8.1128 Acer truncatum
AUR62012019 Chenopodium quinoa
AUR62015354 Chenopodium quinoa
BcaB01g03435 Brassica carinata
BcaB01g03437 Brassica carinata
BcaB06g29223 Brassica carinata
BcaC01g05312 Brassica carinata
BcaC02g07267 Brassica carinata
BcaC02g12455 Brassica carinata
BolC3t15177H Brassica oleracea
BolC4t21960H Brassica oleracea
BolC4t28447H Brassica oleracea
BraA03t11571Z Brassica rapa
BraA04t18655Z Brassica rapa
BraA05t19262Z Brassica rapa
C03p28080 Brassica napus
C04p03220 Brassica napus
C04p69480 Brassica napus
CAN.G128.46 Capsicum annuum
CAN.G128.47 Capsicum annuum
CANSAT64G1307 Cannabis sativa
CARHR137130 Cardamine hirsuta
Carub.0004s2437 Capsella rubella
Ca_08528_v3 Cicer arietinum L.
Cc06_g15770 Coffea canephora
CDE04G2150 Ceratophyllum demersum
CDE05G0371 Ceratophyllum demersum
CDE06G0452 Ceratophyllum demersum
CDE11G0439 Ceratophyllum demersum
Cfa020157 Carpinus fangiana
Ciclev10012160m.g Citrus clementina
CiPaw.09G029700 Carya illinoinensis
CiPaw.10G026000 Carya illinoinensis
ClCG10G017600 Citrullus lanatus
COL.COLO4_29331 Corchorus olitorius
Cpa.g.sc85.54 Carica papaya
CsaV3_3G038720 Cucumis sativus L.
CSS0001516 Camellia sinensis var. sinensis
DCAR_013539 Daucus carota
DCAR_017003 Daucus carota
Dinv14314 Davidia involucrata
Dinv16371 Davidia involucrata
Dinv19681 Davidia involucrata
Dinv24064 Davidia involucrata
Dinv36431 Davidia involucrata
Duzib093G1879 Durio zibethinus
Duzib128G0816 Durio zibethinus
ECA247G1467 Erigeron canadensis
EL10Ac3g06898 Beta vulgaris
Eucgr.A02456 Eucalyptus grandis
FAN02G2154 Fragaria x ananassa
FAN05G4067 Fragaria x ananassa
FAN09G0401 Fragaria x ananassa
FAN14G0601 Fragaria x ananassa
FvH4_6g22070 Fragaria vesca
Glyma.02G171900 Glycine max
Glyma.03G145500 Glycine max
Glyma.09G110100 Glycine max
Glyma.19G148700 Glycine max
Gohir.1Z049549 Gossypium hirsutum
Gohir.A01G137604 Gossypium hirsutum
Gohir.A04G053800 Gossypium hirsutum
Gohir.D01G125600 Gossypium hirsutum
Gohir.D04G089900 Gossypium hirsutum
Gorai.002G156300 Gossypium raimondii
Gorai.012G100300 Gossypium raimondii
GSVIVG01033479001 Vitis vinifera
GSVIVG01033486001 Vitis vinifera
HanXRQChr10g0289891 Helianthus annuus
Haze_20001 Corylus avellana
Haze_20003 Corylus avellana
Hma1.2p1_0431F.1_g151600 Hydrangea macrophylla
HPP92_016181 Vanilla planifolia
HPP92_026735 Vanilla planifolia
Hund19206 Selenicereus undatus
Lalb_Chr18g0047911 Lupinus albus
Lalb_Chr18g0047921 Lupinus albus
Lj1g0001044 Lotus japonicus
Lj5g0018704 Lotus japonicus
Lju124A25G29 Lonicera japonica
Lsat_1_v5_gn_9_26100 Lactuca sativa
Manes.08G043500 Manihot esculenta
Manes.08G043600 Manihot esculenta
Manes.09G036200 Manihot esculenta
Mapoly0003s0065 Marchantia polymorpha
MBI13_g32435_MAGBIO Magnolia biondii
MBI19_g03064_MAGBIO Magnolia biondii
MBI19_g23209_MAGBIO Magnolia biondii
MBI19_g43859_MAGBIO Magnolia biondii
MBI19_g44107_MAGBIO Magnolia biondii
MD12G1056100 Malus domestica
MD14G1055800 Malus domestica
Medtr1g054175 Medicago truncatula
Medtr7g093350 Medicago truncatula
Medtr7g093360 Medicago truncatula
MELO3C009616.2 Cucumis melo
Migut.J01845 Erythranthe guttata
Migut.J01846 Erythranthe guttata
MSTRG.19911 Avicennia marina
MSTRG.6486 Avicennia marina
Nitab4.5_0003600g0010 Nicotiana tabacum
Nitab4.5_0006890g0010 Nicotiana tabacum
Nn2g12077 Nelumbo nucifera
Nn2g15698 Nelumbo nucifera
Nn2g15714 Nelumbo nucifera
Nn3g20891 Nelumbo nucifera
Nn4g25127 Nelumbo nucifera
Nn6g31823 Nelumbo nucifera
Nn6g34520 Nelumbo nucifera
Nn7g35986 Nelumbo nucifera
Nn7g35998 Nelumbo nucifera
Nn7g36026 Nelumbo nucifera
Oeu007752.1 Olea europaea
Oeu032204.1 Olea europaea
Oeu034910.1 Olea europaea
Oeu039811.1 Olea europaea
Os02g0773600 Oryza sativa ssp. japonica
Os06g0207600 Oryza sativa ssp. japonica
Peaxi162Scf00480g00036 Petunia axillaris
PGR004G0238 Punica granatum
PGSC0003DMG400023669 Solanum tuberosum
Phvul.001G143000 Phaseolus vulgaris
Phvul.007G260600 Phaseolus vulgaris
Potri.006G193300 Populus trichocarpa
Potri.006G193500 Populus trichocarpa
Potri.016G058000 Populus trichocarpa
Potri.016G058100 Populus trichocarpa
Prupe.7G079000 Prunus persica
Psat0s5171g0040 Pisum sativum
Psat3g068040 Pisum sativum
QL07p024078 Quercus lobata
RcHm_v2.0_Chr3g0479411 Rosa chinensis
Rhsim03G0005000 Rhododendron simsii
Rhsim03G0005500 Rhododendron simsii
Sabra06G0148400 Salix brachista
Sabra06G0148600 Salix brachista
Sabra16G0061400 Salix brachista
Sabra16G0061500 Salix brachista
SalBow6G7267 Salvia bowleyana
Sed0001893 Sechium edule
SEGI_00470 Sequoiadendron giganteum
SEGI_09004 Sequoiadendron giganteum
SEGI_21966 Sequoiadendron giganteum
SEGI_22789 Sequoiadendron giganteum
SEGI_33896 Sequoiadendron giganteum
SEGI_34260 Sequoiadendron giganteum
Solyc10g080530.2 Solanum lycopersicum
Sopen05g009700 Solanum pennellii
SpUn1032_0010 Schrenkiella parvula
TAR369G0578 Trochodendron aralioides
TAR623G0235 Trochodendron aralioides
TAR633G0715 Trochodendron aralioides
THA.LOC104802623 Tarenaya hassleriana
THA.LOC104824476 Tarenaya hassleriana
Thecc.05G173300 Theobroma cacao
Thhalv10017052m.g Eutrema salsugineum
TPR.G15988 Trifolium pratense
TPR.G16984 Trifolium pratense
TPR.G18228 Trifolium pratense
TWI53G1880 Tripterygium wilfordii
TWI77G0250 Tripterygium wilfordii
vmacro07898 Vaccinium macrocarpon
vmacro07899 Vaccinium macrocarpon
VMungo0720G1699 Vigna mungo
VMungo1383G3335 Vigna mungo
Zm00001eb193290 Zea mays
Zm00001eb256500 Zea mays

User provided reference genes

Program Settings