Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p15240 Brassica napus
A03p54860 Brassica napus
A09p14690 Brassica napus
Aa31LG2G1450 Aethionema arabicum
Aa31LG6G7170 Aethionema arabicum
Actinidia12442 Actinidia chinensis
Actinidia22734 Actinidia chinensis
Actinidia27314 Actinidia chinensis
Actinidia28118 Actinidia chinensis
Ah.05g179520 Amaranthus hybridus
Ah.12g052620 Amaranthus hybridus
AL2G10400 Arabidopsis lyrata
AL7G29380 Arabidopsis lyrata
Aqoxy7G00085 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.QCE7ZS Arachis hypogaea
AT1G64450 Arabidopsis thaliana
AT4G23930 Arabidopsis thaliana
ATR0602G203 Amborella trichopoda
Atru.chr9.1968 Acer truncatum
AUR62004497 Chenopodium quinoa
AUR62010853 Chenopodium quinoa
AUR62019851 Chenopodium quinoa
AUR62023456 Chenopodium quinoa
BcaB07g31466 Brassica carinata
BcaC09g50929 Brassica carinata
BcaNung01100 Brassica carinata
BcaNung04245 Brassica carinata
BcaNung04246 Brassica carinata
BolC1t01843H Brassica oleracea
BolC2t08796H Brassica oleracea
BolC7t45819H Brassica oleracea
BolC9t54676H Brassica oleracea
BraA01t01462Z Brassica rapa
BraA03t14553Z Brassica rapa
BraA09t37115Z Brassica rapa
C01p19170 Brassica napus
C02p27360 Brassica napus
C07p53240 Brassica napus
C09p17780 Brassica napus
CAN.G1415.29 Capsicum annuum
CAN.G1804.15 Capsicum annuum
CANSAT21G0134 Cannabis sativa
CARHR046480 Cardamine hirsuta
CARHR231360 Cardamine hirsuta
Carub.0002s0032 Capsella rubella
Carub.0007s1715 Capsella rubella
Ca_17476_v3 Cicer arietinum L.
Ca_24497_v3 Cicer arietinum L.
Cc02_g39420 Coffea canephora
Cc08_g16180 Coffea canephora
CDE10G0417 Ceratophyllum demersum
CDE10G0641 Ceratophyllum demersum
CDE10G1317 Ceratophyllum demersum
Ciclev10022256m.g Citrus clementina
CiPaw.11G119800 Carya illinoinensis
CiPaw.12G081900 Carya illinoinensis
ClCG07G011530 Citrullus lanatus
Cpa.g.sc79.18 Carica papaya
CsaV3_4G006680 Cucumis sativus L.
CSS0000881 Camellia sinensis var. sinensis
CSS0029909 Camellia sinensis var. sinensis
CSS0035334 Camellia sinensis var. sinensis
DCAR_005391 Daucus carota
DCAR_025255 Daucus carota
Dinv32594 Davidia involucrata
Dinv38825 Davidia involucrata
Dinv40250 Davidia involucrata
Duzib068G0630 Durio zibethinus
Duzib084G0645 Durio zibethinus
Duzib205G1546 Durio zibethinus
ECA240G2545 Erigeron canadensis
ECA240G4713 Erigeron canadensis
EL10Ac5g12926 Beta vulgaris
EL10Ac5g12927 Beta vulgaris
Eucgr.D01751 Eucalyptus grandis
FAN04G0742 Fragaria x ananassa
FAN18G2610 Fragaria x ananassa
Glyma.01G226100 Glycine max
Glyma.05G217500 Glycine max
Glyma.08G023500 Glycine max
Glyma.11G016700 Glycine max
Gohir.A02G099800 Gossypium hirsutum
Gohir.A12G237400 Gossypium hirsutum
Gohir.D03G083900 Gossypium hirsutum
Gohir.D12G238600 Gossypium hirsutum
Gorai.003G078700 Gossypium raimondii
Gorai.008G255500 Gossypium raimondii
GSVIVG01027151001 Vitis vinifera
HanXRQChr05g0137521 Helianthus annuus
HanXRQChr13g0415381 Helianthus annuus
Haze_09079 Corylus avellana
Haze_09080 Corylus avellana
Hma1.2p1_0139F.1_g063270 Hydrangea macrophylla
Hma1.2p1_0440F.1_g153400 Hydrangea macrophylla
HPP92_008814 Vanilla planifolia
HPP92_023824 Vanilla planifolia
HPP92_023897 Vanilla planifolia
Lalb_Chr05g0224071 Lupinus albus
Lalb_Chr09g0320621 Lupinus albus
Lalb_Chr09g0332361 Lupinus albus
Lj2P165T30 Lonicera japonica
Lj4g0007254 Lotus japonicus
LjContig00222g0023656 Lotus japonicus
Lsat_1_v5_gn_3_140300 Lactuca sativa
Lsat_1_v5_gn_4_33021 Lactuca sativa
Lsat_1_v5_gn_6_83800 Lactuca sativa
Manes.02G009000 Manihot esculenta
MBI06_g08483_MAGBIO Magnolia biondii
MD01G1044000 Malus domestica
MD06G1108900 Malus domestica
MD11G1233400 Malus domestica
MD13G1190600 Malus domestica
MD14G1129800 Malus domestica
Medtr5g009130 Medicago truncatula
Medtr8g099560 Medicago truncatula
MELO3C016302.2 Cucumis melo
Migut.B01875 Erythranthe guttata
Migut.E01256 Erythranthe guttata
MSTRG.17346 Avicennia marina
Nitab4.5_0001210g0150 Nicotiana tabacum
Nitab4.5_0006775g0010 Nicotiana tabacum
Nitab4.5_0013740g0010 Nicotiana tabacum
Nn1g00238 Nelumbo nucifera
Nn3g18992 Nelumbo nucifera
Oeu007891.1 Olea europaea
Oeu007892.1 Olea europaea
Oeu009968.1 Olea europaea
Oeu038544.1 Olea europaea
Oeu049385.1 Olea europaea
Os01g0234700 Oryza sativa ssp. japonica
Os05g0238400 Oryza sativa ssp. japonica
Peaxi162Scf00074g00076 Petunia axillaris
Peaxi162Scf00786g00005 Petunia axillaris
PGR042G2331 Punica granatum
PGSC0003DMG400000115 Solanum tuberosum
PGSC0003DMG400012142 Solanum tuberosum
Phvul.002G165000 Phaseolus vulgaris
Phvul.002G298900 Phaseolus vulgaris
Potri.001G090400 Populus trichocarpa
Potri.003G141200 Populus trichocarpa
Prupe.5G121700 Prunus persica
Psat2g185920 Pisum sativum
Psat7g024440 Pisum sativum
PSO135G0996 Papaver somniferum
PSO210G6387 Papaver somniferum
PSO384G2325 Papaver somniferum
PSO761G0226 Papaver somniferum
QL02p030173 Quercus lobata
RcHm_v2.0_Chr7g0194471 Rosa chinensis
Rhsim01G0172700 Rhododendron simsii
Rhsim07G0081700 Rhododendron simsii
Sabra01G0066600 Salix brachista
Sabra03G0101700 Salix brachista
SalBow3G4392 Salvia bowleyana
SalBow6G5928 Salvia bowleyana
SalBow8G5128 Salvia bowleyana
Sc01g0010350 Simmondsia chinensis
Sc23g0002090 Simmondsia chinensis
Sed0026909 Sechium edule
SEGI_21261 Sequoiadendron giganteum
SEGI_37318 Sequoiadendron giganteum
SGA_v2.0_scaffold111G31406 Striga asiatica
SGA_v2.0_scaffold5G03021 Striga asiatica
SGA_v2.0_scaffold96G29020 Striga asiatica
SHI06963 Sapria himalayana
Solyc01g096000.2 Solanum lycopersicum
Solyc08g082470.1 Solanum lycopersicum
Sopen01g039720 Solanum pennellii
Sopen08g030720 Solanum pennellii
Sp2g00290 Schrenkiella parvula
Sp7g21900 Schrenkiella parvula
TAR629G1680 Trochodendron aralioides
TAR636G1231 Trochodendron aralioides
THA.LOC104806437 Tarenaya hassleriana
THA.LOC104809326 Tarenaya hassleriana
THA.LOC104809648 Tarenaya hassleriana
THA.LOC104817593 Tarenaya hassleriana
Thecc.03G299800 Theobroma cacao
Thhalv10023571m.g Eutrema salsugineum
Thhalv10026760m.g Eutrema salsugineum
TPR.G30941 Trifolium pratense
TPR.G37939 Trifolium pratense
TWI15G0699 Tripterygium wilfordii
TWI60G1019 Tripterygium wilfordii
unitig_899.g14798 Utricularia gibba
VMungo0251G3746 Vigna mungo
Zm00001eb119080 Zea mays
Zm00001eb350300 Zea mays

User provided reference genes

Program Settings