Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p05300 Brassica napus
AagrBONN_evm.TU.Sc2ySwM_228.2668 Anthoceros agrestis
Actinidia07238 Actinidia chinensis
Actinidia24206 Actinidia chinensis
Ah.08g215830 Amaranthus hybridus
AL1G18680 Arabidopsis lyrata
Aqoxy2G01228 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.52W323 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.GDD8RQ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.H74NZW Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SR1X9W Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.U1TIAA Arachis hypogaea
AT1G08280 Arabidopsis thaliana
ATR0820G225 Amborella trichopoda
Atru.chr3.3290 Acer truncatum
Atru.chr3.3293 Acer truncatum
AUR62009777 Chenopodium quinoa
AUR62039222 Chenopodium quinoa
BcaB07g34070 Brassica carinata
BcaB07g34071 Brassica carinata
BolC5t29393H Brassica oleracea
BraA06t23738Z Brassica rapa
C05p06380 Brassica napus
C05p40050 Brassica napus
CAN.G225.12 Capsicum annuum
CAN.G919.22 Capsicum annuum
CANSAT54G0701 Cannabis sativa
CARHR008130 Cardamine hirsuta
Carub.0001s0763 Capsella rubella
Ca_19399_v3 Cicer arietinum L.
CBR_g16841 Chara braunii
CBR_g20295 Chara braunii
CBR_g30491 Chara braunii
CBR_g30819 Chara braunii
CBR_g32150 Chara braunii
CBR_g49970 Chara braunii
CBR_g5723 Chara braunii
Cc01_g09370 Coffea canephora
CDE02G0744 Ceratophyllum demersum
CDE06G0775 Ceratophyllum demersum
CDE06G1048 Ceratophyllum demersum
CDE08G0849 Ceratophyllum demersum
CDE08G1668 Ceratophyllum demersum
Cfa010037 Carpinus fangiana
Ciclev10028611m.g Citrus clementina
CiPaw.13G137400 Carya illinoinensis
CiPaw.14G101500 Carya illinoinensis
ClCG02G022190 Citrullus lanatus
COL.COLO4_19910 Corchorus olitorius
Cpa.g.sc32.97 Carica papaya
CsaV3_6G015050 Cucumis sativus L.
CSS0018533 Camellia sinensis var. sinensis
CSS0027733 Camellia sinensis var. sinensis
CSS0037628 Camellia sinensis var. sinensis
DCAR_012184 Daucus carota
Dinv29465 Davidia involucrata
Duzib150G1635 Durio zibethinus
Duzib170G0814 Durio zibethinus
ECA233G1545 Erigeron canadensis
ECA248G0168 Erigeron canadensis
EL10Ac7g15808 Beta vulgaris
Eucgr.B03871 Eucalyptus grandis
Eucgr.B03872 Eucalyptus grandis
FAN11G1888 Fragaria x ananassa
FAN16G3636 Fragaria x ananassa
FAN21G1092 Fragaria x ananassa
FAN25G1659 Fragaria x ananassa
FvH4_3g24660 Fragaria vesca
Glyma.11G184200 Glycine max
Glyma.12G088000 Glycine max
Glyma.12G088100 Glycine max
Glyma.12G088200 Glycine max
Gohir.A05G081500 Gossypium hirsutum
Gohir.A07G109500 Gossypium hirsutum
Gohir.A08G004800 Gossypium hirsutum
Gohir.A08G142550 Gossypium hirsutum
Gohir.D05G084500 Gossypium hirsutum
Gohir.D07G113300 Gossypium hirsutum
Gohir.D08G015066 Gossypium hirsutum
Gohir.D08G163550 Gossypium hirsutum
Gorai.001G121600 Gossypium raimondii
Gorai.004G009500 Gossypium raimondii
Gorai.004G170400 Gossypium raimondii
Gorai.009G086400 Gossypium raimondii
GSVIVG01036150001 Vitis vinifera
HanXRQChr01g0024131 Helianthus annuus
HanXRQChr11g0346801 Helianthus annuus
HanXRQChr12g0364601 Helianthus annuus
Haze_23398 Corylus avellana
Hma1.2p1_0305F.1_g119710 Hydrangea macrophylla
Hma1.2p1_0305F.1_g119720 Hydrangea macrophylla
Hma1.2p1_0578F.1_g182375 Hydrangea macrophylla
HPP92_006804 Vanilla planifolia
HPP92_011490 Vanilla planifolia
HPP92_025134 Vanilla planifolia
HPP92_026090 Vanilla planifolia
Lalb_Chr03g0028031 Lupinus albus
Lalb_Chr19g0136571 Lupinus albus
Lj1A233T8 Lonicera japonica
Lj1A242T18 Lonicera japonica
Lj2C980T3 Lonicera japonica
Lj3g0020685 Lotus japonicus
Lsat_1_v5_gn_1_61681 Lactuca sativa
Lsat_1_v5_gn_6_40461 Lactuca sativa
Manes.04G004900 Manihot esculenta
Manes.11G160800 Manihot esculenta
Mapoly0001s0264 Marchantia polymorpha
Mapoly0005s0249 Marchantia polymorpha
Mapoly0028s0144 Marchantia polymorpha
Mapoly0032s0065 Marchantia polymorpha
MBI01_g03598_MAGBIO Magnolia biondii
MBI17_g01557_MAGBIO Magnolia biondii
MD03G1142400 Malus domestica
MD11G1162900 Malus domestica
Medtr4g053520 Medicago truncatula
MELO3C021417.2 Cucumis melo
Migut.D02354 Erythranthe guttata
MSTRG.18752 Avicennia marina
Nitab4.5_0002002g0040 Nicotiana tabacum
Nitab4.5_0005324g0040 Nicotiana tabacum
Nn2g14115 Nelumbo nucifera
Nn6g34944 Nelumbo nucifera
Oeu002383.1 Olea europaea
Os01g0858900 Oryza sativa ssp. japonica
Os04g0438900 Oryza sativa ssp. japonica
Os04g0506800 Oryza sativa ssp. japonica
Os12g0151500 Oryza sativa ssp. japonica
Peaxi162Scf00091g00013 Petunia axillaris
PGR102G1012 Punica granatum
PGSC0003DMG400007143 Solanum tuberosum
Phvul.011G093000 Phaseolus vulgaris
Potri.004G184200 Populus trichocarpa
Potri.009G144000 Populus trichocarpa
Pp3c14_26500 Physcomitrium patens
Pp3c15_12330 Physcomitrium patens
Pp3c15_22480 Physcomitrium patens
Pp3c6_3550 Physcomitrium patens
PRCOL_00001678 Prasinoderma coloniale
Prupe.6G127500 Prunus persica
Psat5g158880 Pisum sativum
Psat7g189000 Pisum sativum
PSO210G3660 Papaver somniferum
PSO339G5820 Papaver somniferum
PSO384G4986 Papaver somniferum
QL01p012516 Quercus lobata
RcHm_v2.0_Chr5g0044221 Rosa chinensis
RcHm_v2.0_Chr6g0296901 Rosa chinensis
Rhsim13G0110200 Rhododendron simsii
Rhsim13G0110400 Rhododendron simsii
Sabra04G0123900 Salix brachista
Sabra09G0111700 Salix brachista
Sabra09G0114400 Salix brachista
SalBow6G1534 Salvia bowleyana
Sc12g0004420 Simmondsia chinensis
Sed0019020 Sechium edule
SEGI_33073 Sequoiadendron giganteum
SGA_v2.0_scaffold147G36369 Striga asiatica
SGA_v2.0_scaffold22G09875 Striga asiatica
SMO145G0137 Selaginella moellendorffii
SMO331G0026 Selaginella moellendorffii
Solyc06g074370.3 Solanum lycopersicum
Sopen06g030830 Solanum pennellii
Sp1g06910 Schrenkiella parvula
TAR369G0401 Trochodendron aralioides
TAR369G0447 Trochodendron aralioides
TAR369G0931 Trochodendron aralioides
TAR623G1689 Trochodendron aralioides
THA.LOC104800538 Tarenaya hassleriana
THA.LOC104826418 Tarenaya hassleriana
Thecc.09G285800 Theobroma cacao
Thhalv10007826m.g Eutrema salsugineum
TPR.G17216 Trifolium pratense
TWI31G0358 Tripterygium wilfordii
TWI75G1212 Tripterygium wilfordii
unitig_0.g1479 Utricularia gibba
unitig_746.g26606 Utricularia gibba
unitig_899.g15371 Utricularia gibba
unitig_899.g15372 Utricularia gibba
vmacro03307 Vaccinium macrocarpon
vmacro03308 Vaccinium macrocarpon
vmacro03309 Vaccinium macrocarpon
VMungo1127G0822 Vigna mungo
Zm00001eb077930 Zea mays
Zm00001eb092710 Zea mays
Zm00001eb147290 Zea mays
Zm00001eb196980 Zea mays
Zm00001eb366950 Zea mays
Zm00001eb426190 Zea mays

User provided reference genes

Program Settings