Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p14940 Brassica napus
A03p15040 Brassica napus
Aa31sc289G20 Aethionema arabicum
Actinidia08687 Actinidia chinensis
Actinidia28276 Actinidia chinensis
Actinidia34257 Actinidia chinensis
Ah.07g204850 Amaranthus hybridus
AL8G28460 Arabidopsis lyrata
AL8G28750 Arabidopsis lyrata
Aqoxy7G00014 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.1EDB5Y Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.3V8RAA Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.BT3HV7 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.JKFZ9B Arachis hypogaea
AT5G53620 Arabidopsis thaliana
ATR0580G072 Amborella trichopoda
Atru.chr12.2367 Acer truncatum
AUR62006022 Chenopodium quinoa
AUR62035604 Chenopodium quinoa
BcaB01g04247 Brassica carinata
BcaB01g04251 Brassica carinata
BcaB05g22060 Brassica carinata
BcaC01g06262 Brassica carinata
BcaC03g14392 Brassica carinata
BolC2t07934H Brassica oleracea
BolC2t07935H Brassica oleracea
BolC3t14166H Brassica oleracea
BolC9t57239H Brassica oleracea
BolC9t57240H Brassica oleracea
BolC9t57241H Brassica oleracea
BraA03t10789Z Brassica rapa
BraA03t10798Z Brassica rapa
C02p18030 Brassica napus
C03p17530 Brassica napus
C09p43560 Brassica napus
C09p43570 Brassica napus
CAN.G1387.1 Capsicum annuum
CAN.G358.147 Capsicum annuum
CAN.G358.52 Capsicum annuum
CAN.G598.13 Capsicum annuum
CAN.G732.35 Capsicum annuum
CANSAT21G0645 Cannabis sativa
CARHR266770 Cardamine hirsuta
CARHR266800 Cardamine hirsuta
Carub.0008s1383 Capsella rubella
Carub.0008s1397 Capsella rubella
Ca_16756_v3 Cicer arietinum L.
Cc02_g00960 Coffea canephora
Cc11_g00580 Coffea canephora
CDE04G2417 Ceratophyllum demersum
CDE04G2700 Ceratophyllum demersum
CDE07G0792 Ceratophyllum demersum
CiPaw.05G202900 Carya illinoinensis
CiPaw.06G042300 Carya illinoinensis
ClCG01G000140 Citrullus lanatus
COL.COLO4_14351 Corchorus olitorius
COL.COLO4_24960 Corchorus olitorius
Cpa.g.sc3.144 Carica papaya
CsaV3_3G018760 Cucumis sativus L.
CsaV3_5G000020 Cucumis sativus L.
CsaV3_6G021420 Cucumis sativus L.
CsaV3_7G018490 Cucumis sativus L.
CSS0041088 Camellia sinensis var. sinensis
CSS0045837 Camellia sinensis var. sinensis
DCAR_008967 Daucus carota
DCAR_020359 Daucus carota
Dinv06471 Davidia involucrata
Dinv29226 Davidia involucrata
Dinv35373 Davidia involucrata
Dinv35374 Davidia involucrata
Duzib068G1167 Durio zibethinus
Duzib084G0116 Durio zibethinus
Duzib205G1657 Durio zibethinus
ECA232G0388 Erigeron canadensis
ECA232G0587 Erigeron canadensis
ECA234G0451 Erigeron canadensis
EL10Ac3g05201 Beta vulgaris
FAN01G0295 Fragaria x ananassa
FAN03G1455 Fragaria x ananassa
FAN10G0822 Fragaria x ananassa
FAN10G2795 Fragaria x ananassa
FvH4_7g32660 Fragaria vesca
Glyma.04G230800 Glycine max
Glyma.06G134300 Glycine max
Gohir.A08G103800 Gossypium hirsutum
Gohir.A09G186400 Gossypium hirsutum
Gohir.A12G247000 Gossypium hirsutum
Gohir.D08G115200 Gossypium hirsutum
Gohir.D09G181300 Gossypium hirsutum
Gohir.D12G247700 Gossypium hirsutum
Gorai.004G124100 Gossypium raimondii
Gorai.006G203300 Gossypium raimondii
Gorai.008G265800 Gossypium raimondii
GSVIVG01038625001 Vitis vinifera
HanXRQChr03g0061701 Helianthus annuus
HanXRQChr05g0139301 Helianthus annuus
HanXRQChr06g0170111 Helianthus annuus
HanXRQChr09g0246151 Helianthus annuus
HanXRQChr15g0479781 Helianthus annuus
HanXRQChr15g0485391 Helianthus annuus
Haze_00277 Corylus avellana
Hma1.2p1_0094F.1_g047240 Hydrangea macrophylla
HPP92_020943 Vanilla planifolia
Hund09700 Selenicereus undatus
Hund21040 Selenicereus undatus
Lalb_Chr08g0239801 Lupinus albus
Lalb_Chr11g0067271 Lupinus albus
Lalb_Chr23g0271841 Lupinus albus
Lj1C1026T8 Lonicera japonica
Lj1g0027227 Lotus japonicus
Lsat_1_v5_gn_9_50181 Lactuca sativa
Lsat_1_v5_gn_9_50221 Lactuca sativa
Manes.01G041300 Manihot esculenta
Mapoly0021s0043 Marchantia polymorpha
MBI12_g23004_MAGBIO Magnolia biondii
MBI15_g22210_MAGBIO Magnolia biondii
MD01G1227300 Malus domestica
MD07G1297600 Malus domestica
Medtr3g092250 Medicago truncatula
MELO3C005925.2 Cucumis melo
MELO3C010660.2 Cucumis melo
Migut.F00997 Erythranthe guttata
MSTRG.26989 Avicennia marina
MSTRG.8540 Avicennia marina
MSTRG.8618 Avicennia marina
Nitab4.5_0001993g0040 Nicotiana tabacum
Nn1g00405 Nelumbo nucifera
Nn3g18833 Nelumbo nucifera
Oeu037965.1 Olea europaea
Oeu055180.3 Olea europaea
Oeu061023.1 Olea europaea
Os08g0543600 Oryza sativa ssp. japonica
PGR142G2086 Punica granatum
Phvul.009G050200 Phaseolus vulgaris
Potri.012G023200 Populus trichocarpa
Potri.015G006700 Populus trichocarpa
Potri.016G069900 Populus trichocarpa
Pp3c14_13150 Physcomitrium patens
Pp3c17_17470 Physcomitrium patens
Prupe.2G317300 Prunus persica
Psat0s2807g0080 Pisum sativum
PSO017G5262 Papaver somniferum
PSO063G3729 Papaver somniferum
PSO135G0929 Papaver somniferum
PSO170G6851 Papaver somniferum
PSO384G0385 Papaver somniferum
PSO782G5739 Papaver somniferum
QL09p007399 Quercus lobata
QL09p007408 Quercus lobata
QL93p0214_0013 Quercus lobata
QL93p0214_0021 Quercus lobata
RcHm_v2.0_Chr1g0382521 Rosa chinensis
RcHm_v2.0_Chr1g0382561 Rosa chinensis
RcHm_v2.0_Chr1g0382591 Rosa chinensis
RcHm_v2.0_Chr1g0382611 Rosa chinensis
RcHm_v2.0_Chr1g0382631 Rosa chinensis
RcHm_v2.0_Chr1g0382641 Rosa chinensis
Rhsim03G0214000 Rhododendron simsii
Sabra12G0010700 Salix brachista
Sabra15G0004700 Salix brachista
SalBow2G2490 Salvia bowleyana
SalBow6G0961 Salvia bowleyana
Sc19g0000670 Simmondsia chinensis
Sed0000635 Sechium edule
Sed0021595 Sechium edule
SEGI_36158 Sequoiadendron giganteum
SGA_v2.0_scaffold136G35055 Striga asiatica
SGA_v2.0_scaffold565G52945 Striga asiatica
SHI02298 Sapria himalayana
Solyc03g082490.4 Solanum lycopersicum
Sopen03g022220 Solanum pennellii
Sp6g15750 Schrenkiella parvula
Sp6g15760 Schrenkiella parvula
TAR375G0550 Trochodendron aralioides
TAR629G0154 Trochodendron aralioides
TAR636G3562 Trochodendron aralioides
THA.LOC104825162 Tarenaya hassleriana
Thecc.03G206700 Theobroma cacao
Thecc.07G066300 Theobroma cacao
Thhalv10012857m.g Eutrema salsugineum
TWI23G0563 Tripterygium wilfordii
TWI39G1295 Tripterygium wilfordii
unitig_37.g11993 Utricularia gibba
unitig_92.g28243 Utricularia gibba
vmacro06427 Vaccinium macrocarpon
VMungo1309G3003 Vigna mungo
Zm00001eb037420 Zea mays
Zm00001eb198460 Zea mays

User provided reference genes

Program Settings