Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p45490 Brassica napus
A03p45520 Brassica napus
A07p05140 Brassica napus
Aa31LG8G12110 Aethionema arabicum
Actinidia04244 Actinidia chinensis
Actinidia21912 Actinidia chinensis
Ah.14g078720 Amaranthus hybridus
AL3G47340 Arabidopsis lyrata
Aqoxy7G03537 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.52SAJ1 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.80FEVW Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.8W4I3Q Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.IQ39GT Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.S7JRIG Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.V8YXJU Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Y03F6U Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ZD4V4J Arachis hypogaea
AT2G15580 Arabidopsis thaliana
BcaB03g16305 Brassica carinata
BcaB03g16307 Brassica carinata
BcaB08g34596 Brassica carinata
BcaC01g03061 Brassica carinata
BcaC06g36068 Brassica carinata
BolC3t17933H Brassica oleracea
BolC3t17937H Brassica oleracea
BolC7t41242H Brassica oleracea
BraA03t13679Z Brassica rapa
BraA03t13684Z Brassica rapa
BraA07t28311Z Brassica rapa
C03p56460 Brassica napus
C03p56510 Brassica napus
C07p08290 Brassica napus
CANSAT11G2120 Cannabis sativa
CARHR105850 Cardamine hirsuta
Carub.0003s2935 Capsella rubella
Cc06_g07440 Coffea canephora
Cfa020895 Carpinus fangiana
Cfa020896 Carpinus fangiana
Ciclev10007103m.g Citrus clementina
Ciclev10009499m.g Citrus clementina
CiPaw.15G182700 Carya illinoinensis
CiPaw.15G182800 Carya illinoinensis
CiPaw.16G118000 Carya illinoinensis
ClCG02G017240 Citrullus lanatus
ClCG06G012030 Citrullus lanatus
COL.COLO4_24107 Corchorus olitorius
Cpa.g.sc46.85 Carica papaya
CsaV3_1G028490 Cucumis sativus L.
CsaV3_2G003550 Cucumis sativus L.
CSS0003684 Camellia sinensis var. sinensis
CSS0017335 Camellia sinensis var. sinensis
CSS0018942 Camellia sinensis var. sinensis
DCAR_014923 Daucus carota
Dinv22136 Davidia involucrata
Dinv41427 Davidia involucrata
Dinv42915 Davidia involucrata
Dinv43185 Davidia involucrata
Duzib150G0024 Durio zibethinus
Duzib168G1473 Durio zibethinus
Duzib187G0526 Durio zibethinus
Duzib187G0899 Durio zibethinus
ECA234G1438 Erigeron canadensis
ECA236G1572 Erigeron canadensis
EL10Ac8g18824 Beta vulgaris
Eucgr.C00438 Eucalyptus grandis
Eucgr.C04088 Eucalyptus grandis
FAN19G2555 Fragaria x ananassa
FAN23G0723 Fragaria x ananassa
FAN26G1151 Fragaria x ananassa
FAN28G0590 Fragaria x ananassa
FvH4_1g01750 Fragaria vesca
Glyma.09G096300 Glycine max
Glyma.10G244900 Glycine max
Glyma.15G201800 Glycine max
Glyma.17G105300 Glycine max
Glyma.20G149700 Glycine max
Gohir.A06G050200 Gossypium hirsutum
Gohir.A08G095362 Gossypium hirsutum
Gohir.A13G203100 Gossypium hirsutum
Gohir.D08G106900 Gossypium hirsutum
Gohir.D13G208400 Gossypium hirsutum
Gorai.004G114100 Gossypium raimondii
Gorai.010G056400 Gossypium raimondii
Gorai.013G237500 Gossypium raimondii
GSVIVG01012890001 Vitis vinifera
HanXRQChr05g0137971 Helianthus annuus
HanXRQChr05g0137981 Helianthus annuus
HanXRQChr10g0315321 Helianthus annuus
HanXRQChr12g0357031 Helianthus annuus
Haze_19322 Corylus avellana
Haze_19323 Corylus avellana
Hma1.2p1_0182F.1_g080450 Hydrangea macrophylla
Hund09319 Selenicereus undatus
Lalb_Chr08g0233671 Lupinus albus
Lalb_Chr08g0233781 Lupinus albus
Lalb_Chr11g0072961 Lupinus albus
Lalb_Chr23g0275841 Lupinus albus
Lj5g0019666 Lotus japonicus
Lj6g0008260 Lotus japonicus
Lsat_1_v5_gn_5_94401 Lactuca sativa
Lsat_1_v5_gn_8_63100 Lactuca sativa
Manes.06G041300 Manihot esculenta
Manes.14G138300 Manihot esculenta
Manes.14G138400 Manihot esculenta
MBI15_g25866_MAGBIO Magnolia biondii
MD02G1013200 Malus domestica
MD15G1160000 Malus domestica
Medtr2g461020 Medicago truncatula
Medtr4g116480 Medicago truncatula
MELO3C004441.2 Cucumis melo
MELO3C010264.2 Cucumis melo
Migut.K00380 Erythranthe guttata
Migut.K00382 Erythranthe guttata
MSTRG.26318 Avicennia marina
MSTRG.26319 Avicennia marina
MSTRG.6091 Avicennia marina
Nitab4.5_0001021g0070 Nicotiana tabacum
Nitab4.5_0001021g0080 Nicotiana tabacum
Nitab4.5_0001021g0100 Nicotiana tabacum
Nitab4.5_0001555g0090 Nicotiana tabacum
Nitab4.5_0001555g0110 Nicotiana tabacum
Nitab4.5_0001751g0040 Nicotiana tabacum
Nitab4.5_0005330g0090 Nicotiana tabacum
Nitab4.5_0007535g0020 Nicotiana tabacum
Nn2g12242 Nelumbo nucifera
Nn8g39712 Nelumbo nucifera
Oeu051707.1 Olea europaea
Oeu055917.1 Olea europaea
Os02g0682700 Oryza sativa ssp. japonica
Os02g0798200 Oryza sativa ssp. japonica
Peaxi162Scf00108g00110 Petunia axillaris
Peaxi162Scf00391g00019 Petunia axillaris
Peaxi162Scf00391g00113 Petunia axillaris
PGR102G3190 Punica granatum
PGSC0003DMG400030735 Solanum tuberosum
PGSC0003DMG401030736 Solanum tuberosum
PGSC0003DMG402030736 Solanum tuberosum
Phvul.003G174500 Phaseolus vulgaris
Phvul.007G061000 Phaseolus vulgaris
Phvul.009G209800 Phaseolus vulgaris
Potri.006G190300 Populus trichocarpa
Potri.018G114500 Populus trichocarpa
PRCOL_00004260 Prasinoderma coloniale
Psat1g023080 Pisum sativum
Psat4g033320 Pisum sativum
Psat4g033360 Pisum sativum
PSO017G4113 Papaver somniferum
PSO170G0661 Papaver somniferum
PSO170G3167 Papaver somniferum
QL02p091197 Quercus lobata
QL02p091214 Quercus lobata
RcHm_v2.0_Chr2g0086711 Rosa chinensis
Rhsim01G0052400 Rhododendron simsii
Sabra18G0097400 Salix brachista
Sc08g0005730 Simmondsia chinensis
Sc14g0000080 Simmondsia chinensis
Sed0014564 Sechium edule
Sed0026668 Sechium edule
SEGI_35833 Sequoiadendron giganteum
SEGI_39004 Sequoiadendron giganteum
SGA_v2.0_scaffold17G07921 Striga asiatica
SGA_v2.0_scaffold278G46736 Striga asiatica
SHI03245 Sapria himalayana
Solyc07g007160.3 Solanum lycopersicum
Solyc07g007170.3 Solanum lycopersicum
Solyc07g007180.4 Solanum lycopersicum
Sopen06g024020 Solanum pennellii
Sopen07g003210 Solanum pennellii
Sopen07g003220 Solanum pennellii
Sopen07g003230 Solanum pennellii
Sp3g28870 Schrenkiella parvula
TAR383G0618 Trochodendron aralioides
TAR626G0601 Trochodendron aralioides
THA.LOC104808922 Tarenaya hassleriana
Thecc.09G141300 Theobroma cacao
Thhalv10022864m.g Eutrema salsugineum
TPR.G15775 Trifolium pratense
TPR.G25664 Trifolium pratense
TWI63G0270 Tripterygium wilfordii
unitig_748.g7179 Utricularia gibba
vmacro21883 Vaccinium macrocarpon
vmacro21884 Vaccinium macrocarpon
VMungo0540G1931 Vigna mungo
VMungo0720G2634 Vigna mungo
VMungo1215G0714 Vigna mungo
VMungo1309G1330 Vigna mungo
Zm00001eb257950 Zea mays
Zm00001eb374880 Zea mays

User provided reference genes

Program Settings