Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p33090 Brassica napus
Aa31LG11G13210 Aethionema arabicum
Aa31LG5G13230 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.4290 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.5308 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.5313 Anthoceros agrestis
Actinidia21662 Actinidia chinensis
Ah.05g170380 Amaranthus hybridus
AL3G12170 Arabidopsis lyrata
Aqoxy1G03903 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.5D638A Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ICJU69 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.JT5ZHZ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.TE3K01 Arachis hypogaea
AT3G02760 Arabidopsis thaliana
ATR1136G178 Amborella trichopoda
Atru.chr13.2499 Acer truncatum
Atru.chr13.2508 Acer truncatum
AUR62013381 Chenopodium quinoa
AUR62038534 Chenopodium quinoa
BcaB04g19390 Brassica carinata
BcaB04g21398 Brassica carinata
BcaNung05408 Brassica carinata
BNapus_Darmor_BZH_scaffold_122p00030 Brassica napus
BNapus_Darmor_BZH_scaffold_99p00040 Brassica napus
BNapus_Darmor_BZH_scaffold_99p00050 Brassica napus
BolC1t05878H Brassica oleracea
BolC1t05898H Brassica oleracea
BolC3t16292H Brassica oleracea
BraA03t12479Z Brassica rapa
BraSC328t45965Z Brassica rapa
C03p40270 Brassica napus
CAN.G1379.10 Capsicum annuum
CAN.G996.17 Capsicum annuum
CANSAT11G2543 Cannabis sativa
CANSAT35G0345 Cannabis sativa
CANSAT64G0718 Cannabis sativa
CARHR076770 Cardamine hirsuta
Carub.0003s0186 Capsella rubella
Ca_14602_v3 Cicer arietinum L.
CBR_g19630 Chara braunii
Cc04_g00120 Coffea canephora
Cc11_g04140 Coffea canephora
CDE10G0032 Ceratophyllum demersum
CDE10G0063 Ceratophyllum demersum
CDE10G0800 Ceratophyllum demersum
Cfa004677 Carpinus fangiana
Cfa008076 Carpinus fangiana
Cfa022007 Carpinus fangiana
Ciclev10018820m.g Citrus clementina
CiPaw.03G014200 Carya illinoinensis
ClCG11G008420 Citrullus lanatus
COL.COLO4_20337 Corchorus olitorius
COL.COLO4_37592 Corchorus olitorius
Cpa.g.sc1431.2 Carica papaya
Cre02.g142352 Chlamydomonas reinhardtii
CsaV3_2G033230 Cucumis sativus L.
CSS0048399 Camellia sinensis var. sinensis
DCAR_014239 Daucus carota
Dinv25781 Davidia involucrata
Duzib106G1310 Durio zibethinus
Duzib177G0609 Durio zibethinus
ECA238G2554 Erigeron canadensis
EL10Ac1g01269 Beta vulgaris
EL10Ac1g01273 Beta vulgaris
Eucgr.E00009 Eucalyptus grandis
Eucgr.E00010 Eucalyptus grandis
Eucgr.F02946 Eucalyptus grandis
FAN09G4759 Fragaria x ananassa
FAN14G4419 Fragaria x ananassa
FAN20G2805 Fragaria x ananassa
FAN24G0737 Fragaria x ananassa
FAN27G1433 Fragaria x ananassa
FvH4_2g00780 Fragaria vesca
FvH4_3g14280 Fragaria vesca
FvH4_3g25240 Fragaria vesca
Glyma.05G234900 Glycine max
Glyma.08G042400 Glycine max
Gohir.A08G225700 Gossypium hirsutum
Gohir.D08G246100 Gossypium hirsutum
Gorai.004G262600 Gossypium raimondii
GSVIVG01036287001 Vitis vinifera
GSVIVG01036288001 Vitis vinifera
HanXRQChr01g0009571 Helianthus annuus
HanXRQChr01g0009581 Helianthus annuus
HanXRQChr07g0194841 Helianthus annuus
Haze_10275 Corylus avellana
Haze_13959 Corylus avellana
Haze_27378 Corylus avellana
Hma1.2p1_0002F.1_g003050 Hydrangea macrophylla
HPP92_000900 Vanilla planifolia
HPP92_000901 Vanilla planifolia
Hund26943 Selenicereus undatus
Lalb_Chr16g0387641 Lupinus albus
Lj4g0018134 Lotus japonicus
Lj8A738T8 Lonicera japonica
Lj9C543T19 Lonicera japonica
Lsat_1_v5_gn_1_27560 Lactuca sativa
Lsat_1_v5_gn_2_108061 Lactuca sativa
Lsat_1_v5_gn_3_107861 Lactuca sativa
Lsat_1_v5_gn_3_57620 Lactuca sativa
Lsat_1_v5_gn_7_60281 Lactuca sativa
Lsat_1_v5_gn_8_62500 Lactuca sativa
Manes.02G201900 Manihot esculenta
Mapoly0125s0016 Marchantia polymorpha
MBI03_g13500_MAGBIO Magnolia biondii
MBI06_g32172_MAGBIO Magnolia biondii
MD05G1003500 Malus domestica
MD10G1004600 Malus domestica
Medtr1g022010 Medicago truncatula
Medtr1g057860 Medicago truncatula
Medtr1g057880 Medicago truncatula
Medtr1g088900 Medicago truncatula
Medtr4g129940 Medicago truncatula
Medtr5g091840 Medicago truncatula
Medtr5g091860 Medicago truncatula
MELO3C008093.2 Cucumis melo
Migut.E00203 Erythranthe guttata
MSTRG.13350 Avicennia marina
Nitab4.5_0000110g0370 Nicotiana tabacum
Nitab4.5_0001497g0160 Nicotiana tabacum
Nitab4.5_0002446g0080 Nicotiana tabacum
Nitab4.5_0002446g0110 Nicotiana tabacum
Nitab4.5_0002446g0120 Nicotiana tabacum
Nitab4.5_0003246g0090 Nicotiana tabacum
Nn1g00273 Nelumbo nucifera
Nn3g21609 Nelumbo nucifera
Oeu004354.1 Olea europaea
Oeu015342.1 Olea europaea
Oeu017573.1 Olea europaea
Oeu019452.1 Olea europaea
Os05g0150900 Oryza sativa ssp. japonica
Peaxi162Scf00194g01048 Petunia axillaris
PGR042G1411 Punica granatum
PGR083G1739 Punica granatum
PGSC0003DMG400018260 Solanum tuberosum
Phvul.002G320100 Phaseolus vulgaris
Phvul.003G261800 Phaseolus vulgaris
Potri.019G071400 Populus trichocarpa
Prupe.8G006900 Prunus persica
Psat6g083160 Pisum sativum
PSO063G3025 Papaver somniferum
PSO210G5637 Papaver somniferum
PSO210G6366 Papaver somniferum
PSO513G0157 Papaver somniferum
PSO782G5164 Papaver somniferum
QL06p049632 Quercus lobata
QL09p001806 Quercus lobata
QL09p050166 Quercus lobata
QL11p001805 Quercus lobata
QL93p0073_0666 Quercus lobata
RcHm_v2.0_Chr6g0251201 Rosa chinensis
Rhsim08G0251700 Rhododendron simsii
Sabra19G0083400 Salix brachista
SalBow8G3371 Salvia bowleyana
Sc25g0003100 Simmondsia chinensis
Sed0019638 Sechium edule
SEGI_09615 Sequoiadendron giganteum
SEGI_15544 Sequoiadendron giganteum
SEGI_15822 Sequoiadendron giganteum
SEGI_19033 Sequoiadendron giganteum
SEGI_30050 Sequoiadendron giganteum
SEGI_40078 Sequoiadendron giganteum
SGA_v2.0_scaffold63G21735 Striga asiatica
SGA_v2.0_scaffold87G27078 Striga asiatica
SHI17420 Sapria himalayana
Solyc01g102800.3 Solanum lycopersicum
Sopen01g045200 Solanum pennellii
Sp3g01790 Schrenkiella parvula
TAR374G0451 Trochodendron aralioides
TAR374G0972 Trochodendron aralioides
TAR374G1272 Trochodendron aralioides
TAR628G0957 Trochodendron aralioides
THA.LOC104820917 Tarenaya hassleriana
Thecc.05G195900 Theobroma cacao
Thhalv10001912m.g Eutrema salsugineum
Thhalv10020033m.g Eutrema salsugineum
TPR.G29191 Trifolium pratense
TPR.G29194 Trifolium pratense
TPR.G36098 Trifolium pratense
TPR.G8734 Trifolium pratense
TWI38G2004 Tripterygium wilfordii
TWI39G1182 Tripterygium wilfordii
vmacro18730 Vaccinium macrocarpon
vmacro18731 Vaccinium macrocarpon
VMungo0251G0405 Vigna mungo
Zm00001eb267790 Zea mays
Zm00001eb354240 Zea mays

User provided reference genes

Program Settings