Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p19180 Brassica napus
Aa31LG2G11570 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.671 Anthoceros agrestis
Actinidia05462 Actinidia chinensis
Actinidia08440 Actinidia chinensis
Actinidia19047 Actinidia chinensis
Ah.09g223830 Amaranthus hybridus
Ah.09g223840 Amaranthus hybridus
Ah.10g037290 Amaranthus hybridus
AL1G65900 Arabidopsis lyrata
Aqoxy2G03579 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.6T7UPN Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.7RJ7GD Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.T9EQBK Arachis hypogaea
AT1G56290 Arabidopsis thaliana
ATR0665G579 Amborella trichopoda
ATR0681G056 Amborella trichopoda
ATR0681G164 Amborella trichopoda
ATR0681G292 Amborella trichopoda
ATR0691G029 Amborella trichopoda
ATR0691G272 Amborella trichopoda
ATR0753G084 Amborella trichopoda
Atru.chr4.2209 Acer truncatum
AUR62014577 Chenopodium quinoa
AUR62025056 Chenopodium quinoa
AUR62031665 Chenopodium quinoa
AUR62032924 Chenopodium quinoa
AUR62039385 Chenopodium quinoa
BcaB07g31117 Brassica carinata
BcaC04g22040 Brassica carinata
C09p24190 Brassica napus
CAN.G1007.10 Capsicum annuum
CANSAT11G0466 Cannabis sativa
CARHR172220 Cardamine hirsuta
CARHR289840 Cardamine hirsuta
Carub.0002s0788 Capsella rubella
Ca_11084_v3 Cicer arietinum L.
Ca_11090_v3 Cicer arietinum L.
Ca_11092_v3 Cicer arietinum L.
Ca_14184_v3 Cicer arietinum L.
CBR_g41119 Chara braunii
Cc01_g03130 Coffea canephora
Cc03_g04930 Coffea canephora
CDE06G0563 Ceratophyllum demersum
Cfa008372 Carpinus fangiana
Cfa026320 Carpinus fangiana
Ciclev10004361m.g Citrus clementina
Ciclev10004498m.g Citrus clementina
CiPaw.02G115900 Carya illinoinensis
CiPaw.02G116000 Carya illinoinensis
ClCG09G021970 Citrullus lanatus
COL.COLO4_15803 Corchorus olitorius
Cpa.g.sc58.55 Carica papaya
Cre17.g741550 Chlamydomonas reinhardtii
CsaV3_5G014730 Cucumis sativus L.
CSS0010332 Camellia sinensis var. sinensis
CSS0023771 Camellia sinensis var. sinensis
CSS0030608 Camellia sinensis var. sinensis
CSS0034908 Camellia sinensis var. sinensis
CSS0043760 Camellia sinensis var. sinensis
DCAR_024229 Daucus carota
Dinv00242 Davidia involucrata
Dinv02719 Davidia involucrata
Dinv44638 Davidia involucrata
Dinv44639 Davidia involucrata
Duzib138G1962 Durio zibethinus
ECA233G4087 Erigeron canadensis
EL10Ac1g00262 Beta vulgaris
EL10Ac2g03737 Beta vulgaris
EL10Ac2g04632 Beta vulgaris
EL10Ac2g04633 Beta vulgaris
Eucgr.G02714 Eucalyptus grandis
FAN12G1487 Fragaria x ananassa
FAN17G1850 Fragaria x ananassa
FvH4_4g02820 Fragaria vesca
Glyma.10G264200 Glycine max
Glyma.20G126100 Glycine max
Gohir.A06G066800 Gossypium hirsutum
Gohir.D06G065300 Gossypium hirsutum
Gorai.010G076500 Gossypium raimondii
GSVIVG01018130001 Vitis vinifera
HanXRQChr06g0181471 Helianthus annuus
HanXRQChr09g0258341 Helianthus annuus
Haze_11308 Corylus avellana
Haze_11311 Corylus avellana
Haze_21469 Corylus avellana
Hma1.2p1_1276F.1_g272050 Hydrangea macrophylla
Hma1.2p1_1798F.1_g302870 Hydrangea macrophylla
Hma1.2p1_2670F.1_g326620 Hydrangea macrophylla
HPP92_018388 Vanilla planifolia
HPP92_018389 Vanilla planifolia
Hund02549 Selenicereus undatus
Hund02551 Selenicereus undatus
Hund02552 Selenicereus undatus
Hund05016 Selenicereus undatus
Hund11200 Selenicereus undatus
Hund13040 Selenicereus undatus
Lalb_Chr21g0308481 Lupinus albus
Lj2A972G23 Lonicera japonica
Lj2C973G0 Lonicera japonica
Lj2g0003499 Lotus japonicus
Lj5g0001808 Lotus japonicus
Lsat_1_v5_gn_5_72980 Lactuca sativa
Manes.02G210300 Manihot esculenta
Manes.02G214300 Manihot esculenta
Mapoly0080s0020 Marchantia polymorpha
MBI11_g20311_MAGBIO Magnolia biondii
MCO13G162 Micromonas commoda
MD13G1208100 Malus domestica
MD16G1209600 Malus domestica
Medtr1g107575 Medicago truncatula
MELO3C015028.2 Cucumis melo
MELO3C029178.2 Cucumis melo
Migut.G00443 Erythranthe guttata
MSTRG.4105 Avicennia marina
Nitab4.5_0000026g0370 Nicotiana tabacum
Nitab4.5_0000525g0280 Nicotiana tabacum
Nitab4.5_0001418g0070 Nicotiana tabacum
Nn1g02632 Nelumbo nucifera
Oeu002605.1 Olea europaea
Os03g0740700 Oryza sativa ssp. japonica
Peaxi162Scf00813g00221 Petunia axillaris
PGR142G0130 Punica granatum
PGSC0003DMG400015117 Solanum tuberosum
Phvul.007G037800 Phaseolus vulgaris
Potri.001G415900 Populus trichocarpa
Pp3c6_28790 Physcomitrium patens
PRCOL_00006475 Prasinoderma coloniale
Prupe.1G031700 Prunus persica
Psat0s986g0040 Pisum sativum
Psat2g188360 Pisum sativum
Psat2g188400 Pisum sativum
Psat2g188680 Pisum sativum
Psat2g188720 Pisum sativum
Psat6g146280 Pisum sativum
Psat6g220520 Pisum sativum
PSO017G1763 Papaver somniferum
PSO170G0718 Papaver somniferum
QL02p053474 Quercus lobata
QL06p015868 Quercus lobata
RcHm_v2.0_Chr4g0390791 Rosa chinensis
RcHm_v2.0_Chr5g0000461 Rosa chinensis
Rhsim02G0033400 Rhododendron simsii
Rhsim03G0051200 Rhododendron simsii
Rhsim03G0051600 Rhododendron simsii
Rhsim03G0241700 Rhododendron simsii
Rhsim04G0219300 Rhododendron simsii
Rhsim07G0057600 Rhododendron simsii
Rhsim10G0205200 Rhododendron simsii
Rhsim10G0205300 Rhododendron simsii
RhsimUnG0006600 Rhododendron simsii
RhsimUnG0026800 Rhododendron simsii
RhsimUnG0026900 Rhododendron simsii
RhsimUnG0153000 Rhododendron simsii
RhsimUnG0153100 Rhododendron simsii
RhsimUnG0174100 Rhododendron simsii
Sabra16G0282600 Salix brachista
SalBow2G0018 Salvia bowleyana
Sc13g0005100 Simmondsia chinensis
Sed0019602 Sechium edule
SEGI_36314 Sequoiadendron giganteum
SGA_v2.0_scaffold101G29798 Striga asiatica
SMO356G0642 Selaginella moellendorffii
Solyc09g083420.3 Solanum lycopersicum
Sopen09g032360 Solanum pennellii
Sp2g06620 Schrenkiella parvula
SpUn1110_0010 Schrenkiella parvula
TAR362G1191 Trochodendron aralioides
TAR633G1121 Trochodendron aralioides
TAR633G2776 Trochodendron aralioides
THA.LOC104801942 Tarenaya hassleriana
THA.LOC104823115 Tarenaya hassleriana
THA.LOC104823120 Tarenaya hassleriana
Thecc.04G247000 Theobroma cacao
Thecc.05G005400 Theobroma cacao
Thecc.K0000100 Theobroma cacao
Thhalv10023321m.g Eutrema salsugineum
TPR.G13854 Trifolium pratense
TPR.G3263 Trifolium pratense
TPR.G963 Trifolium pratense
TWI73G0437 Tripterygium wilfordii
unitig_736.g22445 Utricularia gibba
unitig_736.g22446 Utricularia gibba
vmacro15411 Vaccinium macrocarpon
VMungo0331G1464 Vigna mungo
VMungo0720G2747 Vigna mungo
VMungo1383G1649 Vigna mungo
Zm00001eb056720 Zea mays

User provided reference genes

Program Settings